; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024803 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024803
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold12:8741161..8742418
RNA-Seq ExpressionSpg024803
SyntenySpg024803
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]4.1e-2328.92Show/hide
Query:  FINELARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLF
        F++E A+  Y+ +  R   FE GF      F  A  ANLG           W +F   P PVN+ IV+EFY+N+    +   +VRGI   ++P AIN  F
Subjt:  FINELARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLF

Query:  NLQ--------------DFPHAGFNEMVVAPSTAY--------------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNE
         LQ                 + G  E +  P T +              L      W  F+K +L+PT+H++TVS   ++L+ +IL   +ID+GKII   
Subjt:  NLQ--------------DFPHAGFNEMVVAPSTAY--------------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNE

Query:  ILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVIL-----LDKGIIDTPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQ--------
           C +++   L FPN IT LC +  V     D IL     L+K  I  P L   +  +  +       +       A S   ++ ++R  Q        
Subjt:  ILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVIL-----LDKGIIDTPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQ--------

Query:  --TYWTYAKRRDDTLRGALQSNFSK
           Y+ YAKRRD  L  AL  +  +
Subjt:  --TYWTYAKRRDDTLRGALQSNFSK

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.8e-2635.43Show/hide
Query:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA P+     +VREFYAN+ +  E    VRG+   WS  AIN++F 
Subjt:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN

Query:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI
        L D    H+ F E +                    V+   AY      L   A  W  F+K  LLPTTH  TVS D ++L+ ++L   SI+VG++I +EI
Subjt:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRTQE
         +C  +K G LFFP+ IT LC  A  P +  +  L + G ID   +AR+  TQE
Subjt:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.2e-3632.95Show/hide
Query:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA P+     +VREFYAN+ + EE    VRG+   WS  AIN++F 
Subjt:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN

Query:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI
        L D    H+ F + +                    V+   AY      L   A  W  F+K RLLPTTH  TVS D ++L+ ++L   SI+VG++I +EI
Subjt:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEF---
         +C  +K G LFFP+ IT LC  A  P +  +  L + G ID   +AR+      + TQ+            R  G +    + LEQ       Q++   
Subjt:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEF---

Query:  -----IERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL
               +Q Q +W Y+K RD  L+ ALQ+NF++P   FP FP ++
Subjt:  -----IERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.1e-2331.09Show/hide
Query:  IRFINELARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNL
        ++F ++ A  +Y E ++       ++F+++     + P F+   I    W  FCA P+     +VREFY N+ N ++    +RG+    S  AIN++F+L
Subjt:  IRFINELARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNL

Query:  QD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEIL
         D    H+ F E +  P                      AY      L   A  W  F+K RLLPTTH  TVS +HV L++++L   SI+VG++I  EI 
Subjt:  QD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEIL

Query:  SCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKG
        +C  +K G LFFP+ IT +C     P +  +  L + G
Subjt:  SCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.1e-3135.06Show/hide
Query:  IVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNLQD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRL
        +VREFYAN+ + EE    VRG+   WS  AIN++F L D    H+ F E +  P                      AY      L   A  W  F+K RL
Subjt:  IVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNLQD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRL

Query:  LPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL--------------Q
        LPTTH   VS D ++L+ ++L   SI+VG++I +EI +C  +K G LFFP+ IT LC  A  P +  +  L + G ID   +AR+               
Subjt:  LPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL--------------Q

Query:  RTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL
        R   A        + Q L+ L    S+QE   +Q Q +W Y+K RD  L+ ALQ+NF++P   FP FP ++
Subjt:  RTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)8.5e-2735.43Show/hide
Query:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA P+     +VREFYAN+ +  E    VRG+   WS  AIN++F 
Subjt:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN

Query:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI
        L D    H+ F E +                    V+   AY      L   A  W  F+K  LLPTTH  TVS D ++L+ ++L   SI+VG++I +EI
Subjt:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRTQE
         +C  +K G LFFP+ IT LC  A  P +  +  L + G ID   +AR+  TQE
Subjt:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-3632.95Show/hide
Query:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I    W QFCA P+     +VREFYAN+ + EE    VRG+   WS  AIN++F 
Subjt:  IRFINELARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFN

Query:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI
        L D    H+ F + +                    V+   AY      L   A  W  F+K RLLPTTH  TVS D ++L+ ++L   SI+VG++I +EI
Subjt:  LQD--FPHAGFNEMV--------------------VAPSTAY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEF---
         +C  +K G LFFP+ IT LC  A  P +  +  L + G ID   +AR+      + TQ+            R  G +    + LEQ       Q++   
Subjt:  LSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL------QRTQEA-----------RQGGLVCGIHQILEQLALSASRQEF---

Query:  -----IERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL
               +Q Q +W Y+K RD  L+ ALQ+NF++P   FP FP ++
Subjt:  -----IERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL

A0A2P5DAQ2 Uncharacterized protein5.2e-2431.09Show/hide
Query:  IRFINELARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNL
        ++F ++ A  +Y E ++       ++F+++     + P F+   I    W  FCA P+     +VREFY N+ N ++    +RG+    S  AIN++F+L
Subjt:  IRFINELARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNL

Query:  QD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEIL
         D    H+ F E +  P                      AY      L   A  W  F+K RLLPTTH  TVS +HV L++++L   SI+VG++I  EI 
Subjt:  QD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEIL

Query:  SCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKG
        +C  +K G LFFP+ IT +C     P +  +  L + G
Subjt:  SCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKG

A0A2P5DXM3 Uncharacterized protein1.5e-3135.06Show/hide
Query:  IVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNLQD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRL
        +VREFYAN+ + EE    VRG+   WS  AIN++F L D    H+ F E +  P                      AY      L   A  W  F+K RL
Subjt:  IVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNLQD--FPHAGFNEMVVAPST--------------------AY------LKSEANTWLGFIKLRL

Query:  LPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL--------------Q
        LPTTH   VS D ++L+ ++L   SI+VG++I +EI +C  +K G LFFP+ IT LC  A  P +  +  L + G ID   +AR+               
Subjt:  LPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNEILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARL--------------Q

Query:  RTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL
        R   A        + Q L+ L    S+QE   +Q Q +W Y+K RD  L+ ALQ+NF++P   FP FP ++
Subjt:  RTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDL

A0A6A2ZUE4 Uncharacterized protein2.0e-2328.92Show/hide
Query:  FINELARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLF
        F++E A+  Y+ +  R   FE GF      F  A  ANLG           W +F   P PVN+ IV+EFY+N+    +   +VRGI   ++P AIN  F
Subjt:  FINELARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLF

Query:  NLQ--------------DFPHAGFNEMVVAPSTAY--------------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNE
         LQ                 + G  E +  P T +              L      W  F+K +L+PT+H++TVS   ++L+ +IL   +ID+GKII   
Subjt:  NLQ--------------DFPHAGFNEMVVAPSTAY--------------LKSEANTWLGFIKLRLLPTTHDSTVSHDHVILIFAILRSLSIDVGKIISNE

Query:  ILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVIL-----LDKGIIDTPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQ--------
           C +++   L FPN IT LC +  V     D IL     L+K  I  P L   +  +  +       +       A S   ++ ++R  Q        
Subjt:  ILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVIL-----LDKGIIDTPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQEFIERQAQ--------

Query:  --TYWTYAKRRDDTLRGALQSNFSK
           Y+ YAKRRD  L  AL  +  +
Subjt:  --TYWTYAKRRDDTLRGALQSNFSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAAGTACCGAAACGACGCCGGGTGAAGCGAAAGGCTGGGTGCGTTCAGGTAATTCGAACTGATACCCCATCACCACCGTCGTCGGATTCTGAGAAAGAGAAGGC
AGAACGAGAGGAACGAGAGAAAAAGGAAGCTGAGGACAGAGAGAGAGAAAAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGCAGACAGAGGCAAAGGAATTGCTGAAG
CATCGGATGAACCTGTAGAGGAAGCAAGAGAAGGACCTTTCATCCGCTTCATCAATGAGCTTGCTCGAGCAAAATACCGAGAGATGCTAAGAAGAGATTTCTTATTCGAA
AGAGGGTTTGGTGACGATCTACCCCATTTCTTAAGAGCAGGAATCGCGAATCTTGGGTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAATATTGTTCGAGA
ATTCTATGCGAATGTTGATAATACAGAGGAATTTCAGGCCATAGTTCGAGGAATACCTGCTGACTGGAGCCCAGGGGCTATCAACTCGTTATTCAACCTTCAGGACTTCC
CACATGCGGGCTTTAATGAGATGGTCGTGGCACCATCAACGGCTTACCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCAT
GATTCAACAGTGTCTCACGACCATGTGATTCTGATATTCGCCATTCTTCGATCCCTGAGCATTGATGTTGGAAAAATTATTTCGAATGAGATTTTAAGTTGCTGGCGCAA
GAAGGTGGGGAAGTTGTTTTTCCCGAACAAGATCACGATGCTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGATTCTGCTTGACAAAGGAATCATAGATA
CGCCCAATCTGGCACGACTTCAGCGTACGCAGGAGGCACGCCAGGGTGGGCTAGTGTGTGGGATTCATCAAATCCTAGAGCAACTGGCACTTTCGGCCAGTAGGCAAGAG
TTTATTGAGAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGACACACTCAGGGGGGCCTTGCAATCCAATTTCTCAAAACCATATCAGGCCTTCCCTAT
GTTTCCCGATGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCAAAAGAGAAGAAGAGGATGATGAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAAGTACCGAAACGACGCCGGGTGAAGCGAAAGGCTGGGTGCGTTCAGGTAATTCGAACTGATACCCCATCACCACCGTCGTCGGATTCTGAGAAAGAGAAGGC
AGAACGAGAGGAACGAGAGAAAAAGGAAGCTGAGGACAGAGAGAGAGAAAAAGCAGCAGAAGAAACTTTGAGAAAGCTTAGAGCAGACAGAGGCAAAGGAATTGCTGAAG
CATCGGATGAACCTGTAGAGGAAGCAAGAGAAGGACCTTTCATCCGCTTCATCAATGAGCTTGCTCGAGCAAAATACCGAGAGATGCTAAGAAGAGATTTCTTATTCGAA
AGAGGGTTTGGTGACGATCTACCCCATTTCTTAAGAGCAGGAATCGCGAATCTTGGGTGGAGTCAGTTCTGTGCGAAACCGGACCCAGTGAATTCGAATATTGTTCGAGA
ATTCTATGCGAATGTTGATAATACAGAGGAATTTCAGGCCATAGTTCGAGGAATACCTGCTGACTGGAGCCCAGGGGCTATCAACTCGTTATTCAACCTTCAGGACTTCC
CACATGCGGGCTTTAATGAGATGGTCGTGGCACCATCAACGGCTTACCTAAAGAGTGAAGCCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCAT
GATTCAACAGTGTCTCACGACCATGTGATTCTGATATTCGCCATTCTTCGATCCCTGAGCATTGATGTTGGAAAAATTATTTCGAATGAGATTTTAAGTTGCTGGCGCAA
GAAGGTGGGGAAGTTGTTTTTCCCGAACAAGATCACGATGCTATGCAGCAGGGCAGGAGTGCCCACGGTTCCAGAGGATGTGATTCTGCTTGACAAAGGAATCATAGATA
CGCCCAATCTGGCACGACTTCAGCGTACGCAGGAGGCACGCCAGGGTGGGCTAGTGTGTGGGATTCATCAAATCCTAGAGCAACTGGCACTTTCGGCCAGTAGGCAAGAG
TTTATTGAGAGGCAAGCTCAAACCTATTGGACCTATGCTAAAAGGAGAGATGACACACTCAGGGGGGCCTTGCAATCCAATTTCTCAAAACCATATCAGGCCTTCCCTAT
GTTTCCCGATGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCAAAAGAGAAGAAGAGGATGATGAAAATTAG
Protein sequenceShow/hide protein sequence
MPEVPKRRRVKRKAGCVQVIRTDTPSPPSSDSEKEKAEREEREKKEAEDREREKAAEETLRKLRADRGKGIAEASDEPVEEAREGPFIRFINELARAKYREMLRRDFLFE
RGFGDDLPHFLRAGIANLGWSQFCAKPDPVNSNIVREFYANVDNTEEFQAIVRGIPADWSPGAINSLFNLQDFPHAGFNEMVVAPSTAYLKSEANTWLGFIKLRLLPTTH
DSTVSHDHVILIFAILRSLSIDVGKIISNEILSCWRKKVGKLFFPNKITMLCSRAGVPTVPEDVILLDKGIIDTPNLARLQRTQEARQGGLVCGIHQILEQLALSASRQE
FIERQAQTYWTYAKRRDDTLRGALQSNFSKPYQAFPMFPDDLFNLWIPPPPVKREEEDDEN