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Spg024814 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024814
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein Ycf2-like
Genome locationscaffold12:8893005..8897766
RNA-Seq ExpressionSpg024814
SyntenySpg024814
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]4.1e-2950.77Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------C----YGDIDGGFIFPLLVWAYEVIPTLSSTENFFARK
        +DDD +K++ L+FLESF +P+Q+  +VD +HI M+DD+E+F+ YPWG               C     G   GGFIFP+L WAYEVIPTLS+  NFF  +
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------C----YGDIDGGFIFPLLVWAYEVIPTLSSTENFFARK

Query:  VSTGIPRIVNWAADTQPKWKDLDRRVFESP
        +S  +PRI+N A DTQPKWKDL ++VF+SP
Subjt:  VSTGIPRIVNWAADTQPKWKDLDRRVFESP

KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]1.6e-2846.36Show/hide
Query:  EKLRTNLPEQVLERFRRS---SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPL
        E L+T + + +   F  S   +DDD +K++ L+FLESF +P+Q+ ++VD +HI M+DD+E+F+ YPWG               C     G    GFIF +
Subjt:  EKLRTNLPEQVLERFRRS---SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPL

Query:  LVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKWKDLDRRVFESP
        L WAYEV PTLS+  NFFA ++   +PRI+NWAADTQPKWKDL ++VF+SP
Subjt:  LVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKWKDLDRRVFESP

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-2826.79Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYG--------------------DIDGGFIFPLLVWAYEVIPTLSSTENFFAR
        +DDD +K++ L+FLESF +P+Q+ ++VD +HI M+DD+E+F+ YPWG                        + GGFIFP+L WAYEVIPTLS+  NFFA 
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYG--------------------DIDGGFIFPLLVWAYEVIPTLSSTENFFAR

Query:  KVSTGIPRIVNWAADTQPKWKDLDRRVFESP-----------------------KEARDLVQEEEDDLEN------------------------------
        ++S  +PRI+NWAADTQPKWKDL ++VF+SP                       +  +D+++E ED+L                                
Subjt:  KVSTGIPRIVNWAADTQPKWKDLDRRVFESP-----------------------KEARDLVQEEEDDLEN------------------------------

Query:  ----------------------------------------------EEDKKEDEVDLKDADNDPLFSFRKDDKGDDPTGQARPRNVAG----GADKNVAN
                                                      EED++ED+V+  + D        K D  +D  G+       G    G D   + 
Subjt:  ----------------------------------------------EEDKKEDEVDLKDADNDPLFSFRKDDKGDDPTGQARPRNVAG----GADKNVAN

Query:  VPQQKDGQHGGQKGADPQATDRCEDVDDAVNDDLIRSIDEREVYESYKRDLKGKRVLKGDQQPCRAAPRLVVHKPPTVNRFPSHPSTELKKGVPAQDLRH
        V + +     G K +        E+ D+ +N  LIRSIDE  +Y+  K+  + +R     Q    + PR++ +  P   +    P      G    + R 
Subjt:  VPQQKDGQHGGQKGADPQATDRCEDVDDAVNDDLIRSIDEREVYESYKRDLKGKRVLKGDQQPCRAAPRLVVHKPPTVNRFPSHPSTELKKGVPAQDLRH

Query:  DPKPPHTVLAEI------NTNFASTRKLKTYKPVALIPSVQQRRLPSKEDHAYIDALRGTGPWQATVQTREPQADSAPS--SFNLHLTQ
             +T  A +      NT      K    K        + R +       +IDALRG       V+ R+ + +S+    SF+LHL+Q
Subjt:  DPKPPHTVLAEI------NTNFASTRKLKTYKPVALIPSVQQRRLPSKEDHAYIDALRGTGPWQATVQTREPQADSAPS--SFNLHLTQ

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]1.2e-2540.64Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPLLVWAYEVIPTLSSTENFFARK
        +DDD +K++ L+FLE F +P+Q+ ++VD ++I M+DD+E+F+ YPWG               C     G    GFIFP+L WAYEVIPTLS+  NFFA +
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPLLVWAYEVIPTLSSTENFFARK

Query:  VSTGIPRIVNWAADTQPKWKDLDRRVFES-----------PKEA-----RDLVQEEEDDLENEEDKKEDEVDLKDADNDPLFSFRKD
        +S  +PRI+NWAAD QPKWKDL ++VF+S           P E         ++ E+D L+  ED+       K++D+    S  KD
Subjt:  VSTGIPRIVNWAADTQPKWKDLDRRVFES-----------PKEA-----RDLVQEEEDDLENEEDKKEDEVDLKDADNDPLFSFRKD

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-2452.25Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYGDIDGGFIFPLLVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKW
        +DDD +K++ L+FLESF +P+Q+ ++V+ +HI M            G   D DGG  FP+L WAYEVIPTLS+  NF A ++S  +PRI+NWAADTQPKW
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYGDIDGGFIFPLLVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKW

Query:  KDLDRRVFESP
        KDL ++VF+SP
Subjt:  KDLDRRVFESP

TrEMBL top hitse value%identityAlignment
A0A5A7STD7 Protein Ycf2-like1.1e-2452.25Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYGDIDGGFIFPLLVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKW
        +DDD +K++ L+FLESF +P    ++V+ +HI M               GD D GFIFP+L WAYEVIPTLS+  N FA K+S  +PRI+NW ADTQPKW
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYGDIDGGFIFPLLVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKW

Query:  KDLDRRVFESP
        KDL ++VF+SP
Subjt:  KDLDRRVFESP

A0A5A7U047 Protein Ycf2-like2.0e-2950.77Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------C----YGDIDGGFIFPLLVWAYEVIPTLSSTENFFARK
        +DDD +K++ L+FLESF +P+Q+  +VD +HI M+DD+E+F+ YPWG               C     G   GGFIFP+L WAYEVIPTLS+  NFF  +
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------C----YGDIDGGFIFPLLVWAYEVIPTLSSTENFFARK

Query:  VSTGIPRIVNWAADTQPKWKDLDRRVFESP
        +S  +PRI+N A DTQPKWKDL ++VF+SP
Subjt:  VSTGIPRIVNWAADTQPKWKDLDRRVFESP

A0A5A7U6E1 Protein Ycf2-like7.5e-2946.36Show/hide
Query:  EKLRTNLPEQVLERFRRS---SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPL
        E L+T + + +   F  S   +DDD +K++ L+FLESF +P+Q+ ++VD +HI M+DD+E+F+ YPWG               C     G    GFIF +
Subjt:  EKLRTNLPEQVLERFRRS---SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPL

Query:  LVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKWKDLDRRVFESP
        L WAYEV PTLS+  NFFA ++   +PRI+NWAADTQPKWKDL ++VF+SP
Subjt:  LVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKWKDLDRRVFESP

A0A5D3CEX9 Protein Ycf2-like9.8e-2926.79Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYG--------------------DIDGGFIFPLLVWAYEVIPTLSSTENFFAR
        +DDD +K++ L+FLESF +P+Q+ ++VD +HI M+DD+E+F+ YPWG                        + GGFIFP+L WAYEVIPTLS+  NFFA 
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWGCYG--------------------DIDGGFIFPLLVWAYEVIPTLSSTENFFAR

Query:  KVSTGIPRIVNWAADTQPKWKDLDRRVFESP-----------------------KEARDLVQEEEDDLEN------------------------------
        ++S  +PRI+NWAADTQPKWKDL ++VF+SP                       +  +D+++E ED+L                                
Subjt:  KVSTGIPRIVNWAADTQPKWKDLDRRVFESP-----------------------KEARDLVQEEEDDLEN------------------------------

Query:  ----------------------------------------------EEDKKEDEVDLKDADNDPLFSFRKDDKGDDPTGQARPRNVAG----GADKNVAN
                                                      EED++ED+V+  + D        K D  +D  G+       G    G D   + 
Subjt:  ----------------------------------------------EEDKKEDEVDLKDADNDPLFSFRKDDKGDDPTGQARPRNVAG----GADKNVAN

Query:  VPQQKDGQHGGQKGADPQATDRCEDVDDAVNDDLIRSIDEREVYESYKRDLKGKRVLKGDQQPCRAAPRLVVHKPPTVNRFPSHPSTELKKGVPAQDLRH
        V + +     G K +        E+ D+ +N  LIRSIDE  +Y+  K+  + +R     Q    + PR++ +  P   +    P      G    + R 
Subjt:  VPQQKDGQHGGQKGADPQATDRCEDVDDAVNDDLIRSIDEREVYESYKRDLKGKRVLKGDQQPCRAAPRLVVHKPPTVNRFPSHPSTELKKGVPAQDLRH

Query:  DPKPPHTVLAEI------NTNFASTRKLKTYKPVALIPSVQQRRLPSKEDHAYIDALRGTGPWQATVQTREPQADSAPS--SFNLHLTQ
             +T  A +      NT      K    K        + R +       +IDALRG       V+ R+ + +S+    SF+LHL+Q
Subjt:  DPKPPHTVLAEI------NTNFASTRKLKTYKPVALIPSVQQRRLPSKEDHAYIDALRGTGPWQATVQTREPQADSAPS--SFNLHLTQ

A0A5D3DCN3 Protein Ycf2-like6.0e-2640.64Show/hide
Query:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPLLVWAYEVIPTLSSTENFFARK
        +DDD +K++ L+FLE F +P+Q+ ++VD ++I M+DD+E+F+ YPWG               C     G    GFIFP+L WAYEVIPTLS+  NFFA +
Subjt:  SDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEMIDDEELFNNYPWG---------------CYGDIDG----GFIFPLLVWAYEVIPTLSSTENFFARK

Query:  VSTGIPRIVNWAADTQPKWKDLDRRVFES-----------PKEA-----RDLVQEEEDDLENEEDKKEDEVDLKDADNDPLFSFRKD
        +S  +PRI+NWAAD QPKWKDL ++VF+S           P E         ++ E+D L+  ED+       K++D+    S  KD
Subjt:  VSTGIPRIVNWAADTQPKWKDLDRRVFES-----------PKEA-----RDLVQEEEDDLENEEDKKEDEVDLKDADNDPLFSFRKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAACCGAACGACCGACGTCAGTTCGATCGGTTTTGATCGCTCTGGACCTCCGACGGTGCACAAAGACGTTGTTTCTTCCCCACAGGTCTCCCCCATCCACCCCGC
CCGCTCGTCCCGATTGCAGCGTCTCCGTCTTCAAGATAAGGATAGTGCAGAAAAGATGGATGATGCGGTGGAGTCTAGAAGGACAGACACTCCCAAGAAAGGGTCGAAGT
CGGAGAAAGACAACAAGAGGAAAAATGACAAAAGGAAGCCTGACAAAAGCAAAAAAAGGTCGAAGACGGCACAGGACTTGAAGAGATCGTCTGACCATAAAAGAAAGGAT
AGGGATTCAGAGAAGGAAACTTCTACTGAGGCCTCCAATGATAATGAGGATGCTGCTAGAGGAGACAAGGACAAACTTAAGTCAGCAAACGACACTTCGTCTAGGCCACG
CCGATCTCCTGGGGAAGCAACACATCCTCTCAAAATATTCTTGCACGCAAAACCTGATGTCATCGAGAAGTTAAGAACAAACCTCCCAGAGCAAGTGTTGGAGAGATTTC
GCCGTAGCTCTGATGACGACATGCTGAAGGTATCACTCCTGCATTTCTTGGAGAGCTTCCCCCTTCCACGACAAGACACTGTAAATGTAGATATGGAGCACATAGAGATG
ATCGATGATGAGGAATTGTTCAACAATTACCCATGGGGGTGCTACGGGGATATCGATGGGGGGTTCATATTCCCTCTACTTGTATGGGCATATGAAGTCATCCCAACACT
GAGCTCCACGGAGAATTTTTTCGCCCGGAAGGTGTCTACGGGCATCCCTCGCATTGTAAATTGGGCTGCAGACACACAACCCAAATGGAAGGACCTTGACCGCAGAGTTT
TCGAGTCTCCAAAGGAAGCTCGCGATTTGGTCCAAGAAGAAGAAGATGACTTGGAAAATGAAGAAGACAAAAAGGAAGATGAAGTGGATTTAAAAGACGCCGATAATGAC
CCATTGTTCAGTTTCAGAAAAGACGATAAGGGCGACGATCCCACAGGGCAAGCACGCCCAAGAAATGTGGCTGGAGGTGCAGATAAGAATGTGGCAAACGTGCCCCAACA
AAAAGATGGCCAGCATGGAGGGCAAAAGGGTGCGGACCCTCAGGCAACTGACAGATGTGAGGATGTGGATGATGCCGTTAATGATGATCTAATTCGTTCAATTGATGAAA
GGGAGGTTTATGAATCTTACAAACGAGACCTCAAAGGAAAAAGAGTGTTAAAGGGCGACCAACAACCATGTAGGGCAGCGCCCAGGCTGGTAGTGCACAAGCCACCCACT
GTAAACCGGTTCCCATCCCATCCATCAACCGAGTTGAAGAAGGGGGTACCTGCCCAAGACCTACGACATGACCCAAAACCTCCGCATACTGTGCTTGCAGAGATAAACAC
GAACTTTGCGTCAACTAGGAAGCTAAAGACCTACAAACCTGTTGCACTAATCCCAAGCGTGCAACAACGGAGGTTGCCTTCGAAAGAAGACCATGCGTATATTGATGCTC
TACGAGGGACAGGGCCTTGGCAAGCAACGGTGCAGACAAGGGAGCCGCAAGCTGACAGTGCACCATCGTCCTTCAACCTCCATCTGACCCAAGAAATGACCAGGGATATT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAAACCGAACGACCGACGTCAGTTCGATCGGTTTTGATCGCTCTGGACCTCCGACGGTGCACAAAGACGTTGTTTCTTCCCCACAGGTCTCCCCCATCCACCCCGC
CCGCTCGTCCCGATTGCAGCGTCTCCGTCTTCAAGATAAGGATAGTGCAGAAAAGATGGATGATGCGGTGGAGTCTAGAAGGACAGACACTCCCAAGAAAGGGTCGAAGT
CGGAGAAAGACAACAAGAGGAAAAATGACAAAAGGAAGCCTGACAAAAGCAAAAAAAGGTCGAAGACGGCACAGGACTTGAAGAGATCGTCTGACCATAAAAGAAAGGAT
AGGGATTCAGAGAAGGAAACTTCTACTGAGGCCTCCAATGATAATGAGGATGCTGCTAGAGGAGACAAGGACAAACTTAAGTCAGCAAACGACACTTCGTCTAGGCCACG
CCGATCTCCTGGGGAAGCAACACATCCTCTCAAAATATTCTTGCACGCAAAACCTGATGTCATCGAGAAGTTAAGAACAAACCTCCCAGAGCAAGTGTTGGAGAGATTTC
GCCGTAGCTCTGATGACGACATGCTGAAGGTATCACTCCTGCATTTCTTGGAGAGCTTCCCCCTTCCACGACAAGACACTGTAAATGTAGATATGGAGCACATAGAGATG
ATCGATGATGAGGAATTGTTCAACAATTACCCATGGGGGTGCTACGGGGATATCGATGGGGGGTTCATATTCCCTCTACTTGTATGGGCATATGAAGTCATCCCAACACT
GAGCTCCACGGAGAATTTTTTCGCCCGGAAGGTGTCTACGGGCATCCCTCGCATTGTAAATTGGGCTGCAGACACACAACCCAAATGGAAGGACCTTGACCGCAGAGTTT
TCGAGTCTCCAAAGGAAGCTCGCGATTTGGTCCAAGAAGAAGAAGATGACTTGGAAAATGAAGAAGACAAAAAGGAAGATGAAGTGGATTTAAAAGACGCCGATAATGAC
CCATTGTTCAGTTTCAGAAAAGACGATAAGGGCGACGATCCCACAGGGCAAGCACGCCCAAGAAATGTGGCTGGAGGTGCAGATAAGAATGTGGCAAACGTGCCCCAACA
AAAAGATGGCCAGCATGGAGGGCAAAAGGGTGCGGACCCTCAGGCAACTGACAGATGTGAGGATGTGGATGATGCCGTTAATGATGATCTAATTCGTTCAATTGATGAAA
GGGAGGTTTATGAATCTTACAAACGAGACCTCAAAGGAAAAAGAGTGTTAAAGGGCGACCAACAACCATGTAGGGCAGCGCCCAGGCTGGTAGTGCACAAGCCACCCACT
GTAAACCGGTTCCCATCCCATCCATCAACCGAGTTGAAGAAGGGGGTACCTGCCCAAGACCTACGACATGACCCAAAACCTCCGCATACTGTGCTTGCAGAGATAAACAC
GAACTTTGCGTCAACTAGGAAGCTAAAGACCTACAAACCTGTTGCACTAATCCCAAGCGTGCAACAACGGAGGTTGCCTTCGAAAGAAGACCATGCGTATATTGATGCTC
TACGAGGGACAGGGCCTTGGCAAGCAACGGTGCAGACAAGGGAGCCGCAAGCTGACAGTGCACCATCGTCCTTCAACCTCCATCTGACCCAAGAAATGACCAGGGATATT
TAG
Protein sequenceShow/hide protein sequence
MLNRTTDVSSIGFDRSGPPTVHKDVVSSPQVSPIHPARSSRLQRLRLQDKDSAEKMDDAVESRRTDTPKKGSKSEKDNKRKNDKRKPDKSKKRSKTAQDLKRSSDHKRKD
RDSEKETSTEASNDNEDAARGDKDKLKSANDTSSRPRRSPGEATHPLKIFLHAKPDVIEKLRTNLPEQVLERFRRSSDDDMLKVSLLHFLESFPLPRQDTVNVDMEHIEM
IDDEELFNNYPWGCYGDIDGGFIFPLLVWAYEVIPTLSSTENFFARKVSTGIPRIVNWAADTQPKWKDLDRRVFESPKEARDLVQEEEDDLENEEDKKEDEVDLKDADND
PLFSFRKDDKGDDPTGQARPRNVAGGADKNVANVPQQKDGQHGGQKGADPQATDRCEDVDDAVNDDLIRSIDEREVYESYKRDLKGKRVLKGDQQPCRAAPRLVVHKPPT
VNRFPSHPSTELKKGVPAQDLRHDPKPPHTVLAEINTNFASTRKLKTYKPVALIPSVQQRRLPSKEDHAYIDALRGTGPWQATVQTREPQADSAPSSFNLHLTQEMTRDI