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Spg024827 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024827
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionORF43m
Genome locationscaffold12:11223394..11225400
RNA-Seq ExpressionSpg024827
SyntenySpg024827
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4348549.1 hypothetical protein F8388_000228 [Cannabis sativa]3.7e-4970.19Show/hide
Query:  MVRKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL---------------VGVGGSLRVP
        MV KKGGTSTLGERST ESC ++          P  P       K IEE  DSFM APLGSGGYSSVGRAPLLQL               VGVGGSLRVP
Subjt:  MVRKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL---------------VGVGGSLRVP

Query:  SSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV
        SSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT RSP G LR+PG+
Subjt:  SSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV

KAG9438463.1 hypothetical protein H6P81_021586 [Aristolochia fimbriata]1.5e-3449.26Show/hide
Query:  RKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSV---------------------GRAPLLQL------
        +++GGTSTLGERST ES        +   ++PG         K IEE SDSFM APLGSG  + +                     G   +L L      
Subjt:  RKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSV---------------------GRAPLLQL------

Query:  ----------------------------VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVA
                                    VGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNPLSEM QKEGK MDRPHRLHPVGT RSP G LR+PGV 
Subjt:  ----------------------------VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVA

Query:  DRP
        DRP
Subjt:  DRP

OMP12438.1 hypothetical protein COLO4_03213 [Corchorus olitorius]8.3e-3374.53Show/hide
Query:  KIIEEVSDSFMQAPLGSGGYSSVGRAPLLQLVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYP
        K IEE SDSFM APLGSG  + +        V V  +  VP SGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMD+PHRLHPVGT RSP G LRYP
Subjt:  KIIEEVSDSFMQAPLGSGGYSSVGRAPLLQLVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYP

Query:  GVADRP
        GVADRP
Subjt:  GVADRP

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]6.7e-4373.53Show/hide
Query:  GERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL-VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNP
        GE++ +ES       G    ++PG         K IEE SDSFM APLGSGGYSSVGRAPLLQL VGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNP
Subjt:  GERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL-VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNP

Query:  LSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV
        LSEMRQKEGKSMDRPHRLHPVGT RSP G LR+PG+
Subjt:  LSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV

QHE65624.1 ORF43m [Nitraria roborowskii]8.3e-3394.74Show/hide
Query:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP
        +VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT RSP G LRYPGVADRP
Subjt:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf683.3e-4373.53Show/hide
Query:  GERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL-VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNP
        GE++ +ES       G    ++PG         K IEE SDSFM APLGSGGYSSVGRAPLLQL VGVGGS RVPSSGIPGEEDQVGPCEQLDALSPFNP
Subjt:  GERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL-VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNP

Query:  LSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV
        LSEMRQKEGKSMDRPHRLHPVGT RSP G LR+PG+
Subjt:  LSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV

A0A6B9QF48 ORF43m4.0e-3394.74Show/hide
Query:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP
        +VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT RSP G LRYPGVADRP
Subjt:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP

A0A6B9QFK3 ORF43m4.0e-3394.74Show/hide
Query:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP
        +VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT RSP G LRYPGVADRP
Subjt:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP

A0A6B9QGL2 ORF43m4.0e-3394.74Show/hide
Query:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP
        +VGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT RSP G LRYPGVADRP
Subjt:  LVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP

A0A7J6DSE9 Uncharacterized protein ycf681.8e-4970.19Show/hide
Query:  MVRKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL---------------VGVGGSLRVP
        MV KKGGTSTLGERST ESC ++          P  P       K IEE  DSFM APLGSGGYSSVGRAPLLQL               VGVGGSLRVP
Subjt:  MVRKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQL---------------VGVGGSLRVP

Query:  SSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV
        SSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGT RSP G LR+PG+
Subjt:  SSGIPGEEDQVGPCEQLDALSPFNPLSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAATGGAGAGTTGTGCGATGATTTACTTCAAGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCC
CAGCTACGCCAAGGAAAAGAATAAAATAATAGAAGAAGTATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGC
AATTGGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCT
TTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTATGAGATCACCCCATGGATGCCTTCGGTATCCAGGGGTCGC
GGACCGACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAATGGAGAGTTGTGCGATGATTTACTTCAAGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCC
CAGCTACGCCAAGGAAAAGAATAAAATAATAGAAGAAGTATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGC
AATTGGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCT
TTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTATGAGATCACCCCATGGATGCCTTCGGTATCCAGGGGTCGC
GGACCGACCATAG
Protein sequenceShow/hide protein sequence
MVRKKGGTSTLGERSTMESCAMIYFKGEVSGSSPGWPSYAKEKNKIIEEVSDSFMQAPLGSGGYSSVGRAPLLQLVGVGGSLRVPSSGIPGEEDQVGPCEQLDALSPFNP
LSEMRQKEGKSMDRPHRLHPVGTMRSPHGCLRYPGVADRP