; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024879 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024879
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold12:13091350..13094326
RNA-Seq ExpressionSpg024879
SyntenySpg024879
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53061.1 hypothetical protein EZV62_022230 [Acer yangbiense]7.5e-0630Show/hide
Query:  EEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIRLQRRD
        ++V++DA +N + +   + G     ++VES+G N+F+FH  ++E+R RI ++GPW+FDK L+VLE P     ++  L   ++   I +  +  I + RR 
Subjt:  EEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIRLQRRD

Query:  ALGFPFQIA-----QSDWRTSFGRFRAVKQRKKRLRKLKQ
        A     QI       ++ +  +G+F  VK +    + LK+
Subjt:  ALGFPFQIA-----QSDWRTSFGRFRAVKQRKKRLRKLKQ

TXG60547.1 hypothetical protein EZV62_015120 [Acer yangbiense]4.9e-0529.66Show/hide
Query:  LGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIR
        L + +E+  +      V     K     L + +E++G+N+F+F   + EDR+ + ++GPW FDK LLVLE+P      +  ++  R D  + +  I  + 
Subjt:  LGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIR

Query:  LQRRDALGFPFQIAQ-----SDWRTSFGRFRAVKQRKKRLRKLKQ
        + RR A     QI +     S+ R  +G+F  VK R    R LK+
Subjt:  LQRRDALGFPFQIAQ-----SDWRTSFGRFRAVKQRKKRLRKLKQ

TXG69259.1 hypothetical protein EZV62_004194 [Acer yangbiense]1.8e-0738.14Show/hide
Query:  LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIR---LQRRDALGFPFQIAQ-----SDWRTSF
        +++ES+G+N+F+FH  + EDR R+ ++GPW FDK L+VLE+P         +AK R + A F  QI  I    + RR A     QI +     S+ R  +
Subjt:  LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIR---LQRRDALGFPFQIAQ-----SDWRTSF

Query:  GRFRAVKQRKKRLRKLKQ
        G+F  VK R    R LK+
Subjt:  GRFRAVKQRKKRLRKLKQ

TXG72530.1 hypothetical protein EZV62_001109 [Acer yangbiense]3.4e-0641.33Show/hide
Query:  LLRLGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELP
        L+   LS ++V+ DA +N + +   + G     ++VES+G N+F+FH  ++E+R RI ++GPW+FDK L+VLE P
Subjt:  LLRLGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELP

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.0e-0834.96Show/hide
Query:  RLGLSEEEVSVDADQNAVARTAEKLGCCLLG--------------------------LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPA
        +L   E+E+++D D +AV    + L   L+G                          L VES+GKNLF+FH   E D  R+MK GPWFFDK L+VL+ P 
Subjt:  RLGLSEEEVSVDADQNAVARTAEKLGCCLLG--------------------------LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPA

Query:  WPKTSVETLAKGRLDAAIFLFQI
          K ++  L   R+   I LF +
Subjt:  WPKTSVETLAKGRLDAAIFLFQI

TrEMBL top hitse value%identityAlignment
A0A5C7H421 CCHC-type domain-containing protein2.4e-0535.37Show/hide
Query:  LSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAK
        LS + V+ +A +N + +     G     +++ES+G N+F+FH  ++ +R RI ++GPW+FDK L+VLE P      + T +K
Subjt:  LSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAK

A0A5C7H7Y9 CCHC-type domain-containing protein3.6e-0630Show/hide
Query:  EEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIRLQRRD
        ++V++DA +N + +   + G     ++VES+G N+F+FH  ++E+R RI ++GPW+FDK L+VLE P     ++  L   ++   I +  +  I + RR 
Subjt:  EEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIRLQRRD

Query:  ALGFPFQIA-----QSDWRTSFGRFRAVKQRKKRLRKLKQ
        A     QI       ++ +  +G+F  VK +    + LK+
Subjt:  ALGFPFQIA-----QSDWRTSFGRFRAVKQRKKRLRKLKQ

A0A5C7IJL3 CCHC-type domain-containing protein8.6e-0838.14Show/hide
Query:  LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIR---LQRRDALGFPFQIAQ-----SDWRTSF
        +++ES+G+N+F+FH  + EDR R+ ++GPW FDK L+VLE+P         +AK R + A F  QI  I    + RR A     QI +     S+ R  +
Subjt:  LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIR---LQRRDALGFPFQIAQ-----SDWRTSF

Query:  GRFRAVKQRKKRLRKLKQ
        G+F  VK R    R LK+
Subjt:  GRFRAVKQRKKRLRKLKQ

A0A5C7IT69 Uncharacterized protein1.6e-0641.33Show/hide
Query:  LLRLGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELP
        L+   LS ++V+ DA +N + +   + G     ++VES+G N+F+FH  ++E+R RI ++GPW+FDK L+VLE P
Subjt:  LLRLGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELP

A0A6J1DU55 uncharacterized protein LOC1110231353.9e-0834.96Show/hide
Query:  RLGLSEEEVSVDADQNAVARTAEKLGCCLLG--------------------------LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPA
        +L   E+E+++D D +AV    + L   L+G                          L VES+GKNLF+FH   E D  R+MK GPWFFDK L+VL+ P 
Subjt:  RLGLSEEEVSVDADQNAVARTAEKLGCCLLG--------------------------LQVESLGKNLFIFHMVHEEDRVRIMKQGPWFFDKFLLVLELPA

Query:  WPKTSVETLAKGRLDAAIFLFQI
          K ++  L   R+   I LF +
Subjt:  WPKTSVETLAKGRLDAAIFLFQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCGGTACCGTTTCAAATCTATGCCAGTTGGTGGCATGTCTCCTGTGCGAGCAAGGATCTCGCGGATTCCGGTGATTTTGCACCGTTTTTATTTGGATGGTTTTGT
GGTTGCTCACCAAGTACCATCCTCTGGAGTTATTGTTTCTGCTCTGATTTTTTTGCTAAGATTGGGCTTATCTGAGGAGGAGGTGTCTGTGGATGCGGATCAGAATGCGG
TGGCTCGAACTGCGGAAAAATTGGGTTGTTGTTTATTGGGTTTGCAGGTTGAATCACTGGGGAAAAATCTTTTTATTTTCCACATGGTACATGAGGAGGATCGTGTTCGT
ATTATGAAGCAGGGACCATGGTTTTTTGATAAGTTCCTTCTAGTTTTGGAACTTCCGGCCTGGCCGAAGACCAGCGTTGAGACCCTTGCTAAAGGGCGTCTCGATGCTGC
CATTTTCCTTTTCCAGATTGGCGGCATCAGGTTACAGCGTCGCGACGCTCTCGGCTTTCCATTCCAGATTGCGCAGTCTGATTGGAGGACTTCTTTTGGACGATTTAGAG
CTGTAAAACAGAGGAAAAAGAGGCTGAGGAAGCTGAAACAAGTGGAGGAAAAGCGATATGCTGGAAAGGGAAATTCAGTTGCTCGATCTTCGGCCAAAGTGCAAGCGATG
AATTCGGGGTCTGAAGGAGGTTCAAACGTATTTTTTAGCCCAAATCGACAGGATTTTCTCAAGAAGCTTCAATCGCCGATGGCCATGGATACGGATGGGAGGCGAATTGA
ACGCATTACCATAAACAGAAATGTCAGCCGAAGAGCGTTCTCATCTGTGCCCGCGAAATTCCCTGGTAATGGAGGTCCGGTGACTTGGCTGCACAAATCCGAAAGTCCGA
CGGTTGGAGGATCTCCGGTGAAGGTTTTGAACAAAGAAGAGCCTTTTAATGAAGGGAAGATTCCAGTGACGTGTGCGAAGCGGTTGGATATGGATCAAGTTGTACCGTTG
ATTTCTCAAGCTGATAAAGATCAATTGGAGATAGATGCTATGAATGCCCAATTGACTGCTCATTTGGAGGAGATACTTGGTAAGGATTTGCAATTTCATATGGGCACTAC
GTCACCTGGAGGAAACTACGTCTTCTGGAGGAAAGATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCGGTACCGTTTCAAATCTATGCCAGTTGGTGGCATGTCTCCTGTGCGAGCAAGGATCTCGCGGATTCCGGTGATTTTGCACCGTTTTTATTTGGATGGTTTTGT
GGTTGCTCACCAAGTACCATCCTCTGGAGTTATTGTTTCTGCTCTGATTTTTTTGCTAAGATTGGGCTTATCTGAGGAGGAGGTGTCTGTGGATGCGGATCAGAATGCGG
TGGCTCGAACTGCGGAAAAATTGGGTTGTTGTTTATTGGGTTTGCAGGTTGAATCACTGGGGAAAAATCTTTTTATTTTCCACATGGTACATGAGGAGGATCGTGTTCGT
ATTATGAAGCAGGGACCATGGTTTTTTGATAAGTTCCTTCTAGTTTTGGAACTTCCGGCCTGGCCGAAGACCAGCGTTGAGACCCTTGCTAAAGGGCGTCTCGATGCTGC
CATTTTCCTTTTCCAGATTGGCGGCATCAGGTTACAGCGTCGCGACGCTCTCGGCTTTCCATTCCAGATTGCGCAGTCTGATTGGAGGACTTCTTTTGGACGATTTAGAG
CTGTAAAACAGAGGAAAAAGAGGCTGAGGAAGCTGAAACAAGTGGAGGAAAAGCGATATGCTGGAAAGGGAAATTCAGTTGCTCGATCTTCGGCCAAAGTGCAAGCGATG
AATTCGGGGTCTGAAGGAGGTTCAAACGTATTTTTTAGCCCAAATCGACAGGATTTTCTCAAGAAGCTTCAATCGCCGATGGCCATGGATACGGATGGGAGGCGAATTGA
ACGCATTACCATAAACAGAAATGTCAGCCGAAGAGCGTTCTCATCTGTGCCCGCGAAATTCCCTGGTAATGGAGGTCCGGTGACTTGGCTGCACAAATCCGAAAGTCCGA
CGGTTGGAGGATCTCCGGTGAAGGTTTTGAACAAAGAAGAGCCTTTTAATGAAGGGAAGATTCCAGTGACGTGTGCGAAGCGGTTGGATATGGATCAAGTTGTACCGTTG
ATTTCTCAAGCTGATAAAGATCAATTGGAGATAGATGCTATGAATGCCCAATTGACTGCTCATTTGGAGGAGATACTTGGTAAGGATTTGCAATTTCATATGGGCACTAC
GTCACCTGGAGGAAACTACGTCTTCTGGAGGAAAGATTGGTAA
Protein sequenceShow/hide protein sequence
MLRYRFKSMPVGGMSPVRARISRIPVILHRFYLDGFVVAHQVPSSGVIVSALIFLLRLGLSEEEVSVDADQNAVARTAEKLGCCLLGLQVESLGKNLFIFHMVHEEDRVR
IMKQGPWFFDKFLLVLELPAWPKTSVETLAKGRLDAAIFLFQIGGIRLQRRDALGFPFQIAQSDWRTSFGRFRAVKQRKKRLRKLKQVEEKRYAGKGNSVARSSAKVQAM
NSGSEGGSNVFFSPNRQDFLKKLQSPMAMDTDGRRIERITINRNVSRRAFSSVPAKFPGNGGPVTWLHKSESPTVGGSPVKVLNKEEPFNEGKIPVTCAKRLDMDQVVPL
ISQADKDQLEIDAMNAQLTAHLEEILGKDLQFHMGTTSPGGNYVFWRKDW