; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024885 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024885
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPhotosystem I iron-sulfur center
Genome locationscaffold12:11241115..11241836
RNA-Seq ExpressionSpg024885
SyntenySpg024885
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR017491 - Photosystem I protein PsaC
IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR039428 - NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH03065.1 hypothetical protein Prudu_013827 [Prunus dulcis]3.7e-7094.44Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDSRQLKGNI SIFVIAIAAAEAAIGPAIV SIYRNRKSTHPMSHSVKIY TCIGCTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTR L
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL

KAF1876812.1 hypothetical protein Lal_00035374 [Lupinus albus]1.2e-5784.03Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIG AIV SI RNRKST               CTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL

KAF8376867.1 hypothetical protein HHK36_031470 [Tetracentron sinense]3.3e-5894.17Show/hide
Query:  RQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTD
        RQLKG+IFSIFVIAIAAAEAAIGPAIV SIYRNRKSTHPMSHSVKIY TCIGCTQCVRACPTDVLEMIPW GCK KQIASAPRTEDCVGCKRCESACPTD
Subjt:  RQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTD

Query:  FLSVCVYLWHETTRSLGLAY
        FLSV VYLWHETTRS+GLAY
Subjt:  FLSVCVYLWHETTRSLGLAY

KAG8503061.1 hypothetical protein CXB51_000826 [Gossypium anomalum]1.9e-6186.52Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILN V +NFVTFSDFFDSRQLKGNIFSIFVI IA AEA+IG  IV SIYRN+KSTHPMS SVKIY TCIGCTQCVR CPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETT
        CK KQIASAPRTE CVGCKRCESACP DF SV VYLWHETT
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETT

RYR58339.1 hypothetical protein Ahy_A05g024027 [Arachis hypogaea]3.9e-5982.43Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDS QLKGNIFSIFVIAIAAAEAAIGPAIV SIYRNRKST               CTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+   +
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

TrEMBL top hitse value%identityAlignment
A0A1Y3BXK7 Multifunctional fusion protein4.6e-5881.46Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTH--------------------PMSHSVKIYYTCIG
        MVRALMCLELILNAVN+NFVTFSDFFDSRQLKG IFSIFVIAIAAAEAAIG AIV SIYRNRKST                     PMSHSVKIY TCIG
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTH--------------------PMSHSVKIYYTCIG

Query:  CTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLS
        CTQCVRACPTDVLEMIPW GCK KQIASAPRTEDCVGCKRCESACPTDFLS
Subjt:  CTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLS

A0A445D565 9 kDa polypeptide1.9e-5982.43Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDS QLKGNIFSIFVIAIAAAEAAIGPAIV SIYRNRKST               CTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+   +
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

A0A4Y1RG88 9 kDa polypeptide1.8e-7094.44Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDSRQLKGNI SIFVIAIAAAEAAIGPAIV SIYRNRKSTHPMSHSVKIY TCIGCTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTR L
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL

A0A6A5N0E4 9 kDa polypeptide6.0e-5884.03Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIG AIV SI RNRKST               CTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL

A0A6A5N1E2 9 kDa polypeptide6.0e-5884.03Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG
        MVRALMCLELILNAVN+NFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIG AIV SI RNRKST               CTQCVRACPTDVLEMIPW G
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGG

Query:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL
        CK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+
Subjt:  CKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSL

SwissProt top hitse value%identityAlignment
A4GGE7 Photosystem I iron-sulfur center7.6e-4295.06Show/hide
Query:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        MSHSVKIY TCIGCTQCVRACPTDVLEMIPWGGCK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+GLAY
Subjt:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

A4QJG7 Photosystem I iron-sulfur center5.0e-4193.83Show/hide
Query:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        MSHSVKIY TCIGCTQCVRACPTDVLEMIPW GCK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+GLAY
Subjt:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

A4QJQ1 Photosystem I iron-sulfur center5.0e-4193.83Show/hide
Query:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        MSHSVKIY TCIGCTQCVRACPTDVLEMIPW GCK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+GLAY
Subjt:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

P10793 Photosystem I iron-sulfur center7.6e-4295.06Show/hide
Query:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        MSHSVKIY TCIGCTQCVRACPTDVLEMIPWGGCK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+GLAY
Subjt:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

P42046 Photosystem I iron-sulfur center7.6e-4295.06Show/hide
Query:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        MSHSVKIY TCIGCTQCVRACPTDVLEMIPWGGCK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+GLAY
Subjt:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

Arabidopsis top hitse value%identityAlignment
ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding3.5e-4293.83Show/hide
Query:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY
        MSHSVKIY TCIGCTQCVRACPTDVLEMIPW GCK KQIASAPRTEDCVGCKRCESACPTDFLSV VYLWHETTRS+GLAY
Subjt:  MSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAPRTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY

ATCG01070.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L3.7e-2390.62Show/hide
Query:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKS
        MVRALMCLELILNAVNMNFVTFSDFFD+ QLKG IF IFVIAIAAAEAAIG AIV SIYRNRKS
Subjt:  MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATGAATTTCGTAACATTTTCTGATTTTTTTGATAGTCGCCAATTAAAAGGGAATATTTTCTC
AATTTTTGTTATAGCTATTGCAGCCGCTGAAGCAGCTATTGGCCCAGCTATTGTTTTGTCAATTTATCGTAACAGAAAATCAACTCATCCAATGTCACATTCAGTAAAGA
TTTATTATACATGTATAGGATGTACTCAATGTGTCCGAGCTTGCCCCACAGATGTATTAGAAATGATACCTTGGGGCGGATGTAAAACTAAGCAAATAGCTTCGGCTCCA
AGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCTGCCTGTCCGACGGATTTCTTGAGTGTTTGCGTTTATTTATGGCATGAAACAACTCGAAGCCTGGGTCTAGC
TTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGAGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATGAATTTCGTAACATTTTCTGATTTTTTTGATAGTCGCCAATTAAAAGGGAATATTTTCTC
AATTTTTGTTATAGCTATTGCAGCCGCTGAAGCAGCTATTGGCCCAGCTATTGTTTTGTCAATTTATCGTAACAGAAAATCAACTCATCCAATGTCACATTCAGTAAAGA
TTTATTATACATGTATAGGATGTACTCAATGTGTCCGAGCTTGCCCCACAGATGTATTAGAAATGATACCTTGGGGCGGATGTAAAACTAAGCAAATAGCTTCGGCTCCA
AGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCTGCCTGTCCGACGGATTTCTTGAGTGTTTGCGTTTATTTATGGCATGAAACAACTCGAAGCCTGGGTCTAGC
TTATTGA
Protein sequenceShow/hide protein sequence
MVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVLSIYRNRKSTHPMSHSVKIYYTCIGCTQCVRACPTDVLEMIPWGGCKTKQIASAP
RTEDCVGCKRCESACPTDFLSVCVYLWHETTRSLGLAY