; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024909 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024909
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:11638368..11651349
RNA-Seq ExpressionSpg024909
SyntenySpg024909
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACGTCCATGCTCTACTTTCGACAAAAGAACCGATCAAAACCGACCGACCGAACCGACGTTGGTCGGTCGAGGGAAAGAAAAAATCGAGCAGGATCCGAAAGCAGT
ACATGAACAGAGTAGAATTAGGCTAATCAGACAGAGGAAACGATACAATCGAAGGAGGCAAAAGGGCGGCGATAATGGAGAGGATGGATTGGATGATATCAAGGTGAGAA
AAAATGACAAAGAAAAGAAAAAAGAGAGGAATGAAGGAGGAAGAAGAGGAACCTCGAAAGCGGCTAGGGCTGGAGCAAGATCTAGGAGTGAGAGTCCATGGAAGTTGGTT
GAGAGATTGTGTTGTGATGGAAAACGATGCGAGGTGAAGCCCCTAAAGAAGAAATGGTCGATTAAAGTCTTGGAGGCTGCTGCGATTCTTGAAGGTCTCAAATTTATCGT
CGAGGCTCACAGAGTAGAGGATGCTCCACTGGTGGTCCAATCCGATGCTATGGAGATCATCAACCTGCTTAACGATTCATCGAAGGATCTCTTAGAAATTAAGAACTTCA
AGGAGGCAATTCTTGACCTCTATTTGAAGATGGGTTTGGTGCTATTTCGCCACTGCCCAAGATCATTCAACACAGTAGCCCACTGTGTAGCGATAAAAGCCGATGAATTT
TTTGTTGAGTATTTGAGGAGTGTTCTTCTCGCGAGGAATATGGGTTTGTTTTTGTGTCCTCAGAGTTCCCCTTTTGGCTTAAATCCCTCCTTATTAATGAGGGTTGGTGT
ACTTAATGTCTGGGATTCGACCCTTAACTATATTACCCAAGGCCTTGAACTGTTGCATCGCCCCTTAGCCATATTACCCAAGGCACCTGATGACTTCACGACGTATTGGC
CGTTCCCGACTCCCAATACCCGCTTTCTACCCTCATCACACTGCCCCTTGGCTATATTACCCAAGGCACCCGATGCTCCTCTTAAACCATTACCACCCGTCAACCATTTT
TACCTGAGGCACCTGGAGTCCAGTTGTGCCAGCATTTGTGCTCTGATGCAGACTGAAATCAATGGTGAAAAGTTTAACACCTATTTGGCCTTGATTTCAAGCACAGTTAG
AAGGCTAAGCGAGGGCCCTACCCTCTCACTGGCCCGAGAGGGGTTTCTGTTTATTGGTAGGACCATAAATAGGTTGTTCATTAGAGGAACACTGTGTGATTCTCGTGGTG
GTGTTGATCATGACTTTCCAGTACAAAGAAGATCTTTCACCCAAGGTGTTGGTGAAGCCCTCCTGAGTTGGCGATGGAGGTCTAGTGAAATTGGTTGGGAGGTTGCGAAT
TCCATGCTAGCAGAGAACATCCTTGTTATCTCCTTCACCCTCGTTCTAGCTTATCAACACTTTTTGGTGAAAATATCTAGCTACGAGCAAAGGTCACAAACTTGGATTAA
TACTCACTTCCCTGGAGTTACGGACACTCGTGAAGGACTAACTTGCCGTTATTGGTCGATATCCGTGGACACAGAAATATTCTTCAGTGAGAAGAGTGCAGCTCTTCTTA
AGGGCAAGGTTGAGGCTCTGATGATGGTGTCAGCCCTGAAACGGGTGAGACAGTGGGTGGAGATGAGGAACGATCTTTGCCCGATGGCAAAGCTTTGTGATGAGCGACCC
AAAGAAGAGTTTCCCCACTCTCTTCCTACCTGGAGAGGATCTCGCTTGATCTTTTTCTCTTTTATGAGCAACTGGCCAAAAGAGGGGTGTTCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGACGTCCATGCTCTACTTTCGACAAAAGAACCGATCAAAACCGACCGACCGAACCGACGTTGGTCGGTCGAGGGAAAGAAAAAATCGAGCAGGATCCGAAAGCAGT
ACATGAACAGAGTAGAATTAGGCTAATCAGACAGAGGAAACGATACAATCGAAGGAGGCAAAAGGGCGGCGATAATGGAGAGGATGGATTGGATGATATCAAGGTGAGAA
AAAATGACAAAGAAAAGAAAAAAGAGAGGAATGAAGGAGGAAGAAGAGGAACCTCGAAAGCGGCTAGGGCTGGAGCAAGATCTAGGAGTGAGAGTCCATGGAAGTTGGTT
GAGAGATTGTGTTGTGATGGAAAACGATGCGAGGTGAAGCCCCTAAAGAAGAAATGGTCGATTAAAGTCTTGGAGGCTGCTGCGATTCTTGAAGGTCTCAAATTTATCGT
CGAGGCTCACAGAGTAGAGGATGCTCCACTGGTGGTCCAATCCGATGCTATGGAGATCATCAACCTGCTTAACGATTCATCGAAGGATCTCTTAGAAATTAAGAACTTCA
AGGAGGCAATTCTTGACCTCTATTTGAAGATGGGTTTGGTGCTATTTCGCCACTGCCCAAGATCATTCAACACAGTAGCCCACTGTGTAGCGATAAAAGCCGATGAATTT
TTTGTTGAGTATTTGAGGAGTGTTCTTCTCGCGAGGAATATGGGTTTGTTTTTGTGTCCTCAGAGTTCCCCTTTTGGCTTAAATCCCTCCTTATTAATGAGGGTTGGTGT
ACTTAATGTCTGGGATTCGACCCTTAACTATATTACCCAAGGCCTTGAACTGTTGCATCGCCCCTTAGCCATATTACCCAAGGCACCTGATGACTTCACGACGTATTGGC
CGTTCCCGACTCCCAATACCCGCTTTCTACCCTCATCACACTGCCCCTTGGCTATATTACCCAAGGCACCCGATGCTCCTCTTAAACCATTACCACCCGTCAACCATTTT
TACCTGAGGCACCTGGAGTCCAGTTGTGCCAGCATTTGTGCTCTGATGCAGACTGAAATCAATGGTGAAAAGTTTAACACCTATTTGGCCTTGATTTCAAGCACAGTTAG
AAGGCTAAGCGAGGGCCCTACCCTCTCACTGGCCCGAGAGGGGTTTCTGTTTATTGGTAGGACCATAAATAGGTTGTTCATTAGAGGAACACTGTGTGATTCTCGTGGTG
GTGTTGATCATGACTTTCCAGTACAAAGAAGATCTTTCACCCAAGGTGTTGGTGAAGCCCTCCTGAGTTGGCGATGGAGGTCTAGTGAAATTGGTTGGGAGGTTGCGAAT
TCCATGCTAGCAGAGAACATCCTTGTTATCTCCTTCACCCTCGTTCTAGCTTATCAACACTTTTTGGTGAAAATATCTAGCTACGAGCAAAGGTCACAAACTTGGATTAA
TACTCACTTCCCTGGAGTTACGGACACTCGTGAAGGACTAACTTGCCGTTATTGGTCGATATCCGTGGACACAGAAATATTCTTCAGTGAGAAGAGTGCAGCTCTTCTTA
AGGGCAAGGTTGAGGCTCTGATGATGGTGTCAGCCCTGAAACGGGTGAGACAGTGGGTGGAGATGAGGAACGATCTTTGCCCGATGGCAAAGCTTTGTGATGAGCGACCC
AAAGAAGAGTTTCCCCACTCTCTTCCTACCTGGAGAGGATCTCGCTTGATCTTTTTCTCTTTTATGAGCAACTGGCCAAAAGAGGGGTGTTCTCTGTAG
Protein sequenceShow/hide protein sequence
MRRPCSTFDKRTDQNRPTEPTLVGRGKEKIEQDPKAVHEQSRIRLIRQRKRYNRRRQKGGDNGEDGLDDIKVRKNDKEKKKERNEGGRRGTSKAARAGARSRSESPWKLV
ERLCCDGKRCEVKPLKKKWSIKVLEAAAILEGLKFIVEAHRVEDAPLVVQSDAMEIINLLNDSSKDLLEIKNFKEAILDLYLKMGLVLFRHCPRSFNTVAHCVAIKADEF
FVEYLRSVLLARNMGLFLCPQSSPFGLNPSLLMRVGVLNVWDSTLNYITQGLELLHRPLAILPKAPDDFTTYWPFPTPNTRFLPSSHCPLAILPKAPDAPLKPLPPVNHF
YLRHLESSCASICALMQTEINGEKFNTYLALISSTVRRLSEGPTLSLAREGFLFIGRTINRLFIRGTLCDSRGGVDHDFPVQRRSFTQGVGEALLSWRWRSSEIGWEVAN
SMLAENILVISFTLVLAYQHFLVKISSYEQRSQTWINTHFPGVTDTREGLTCRYWSISVDTEIFFSEKSAALLKGKVEALMMVSALKRVRQWVEMRNDLCPMAKLCDERP
KEEFPHSLPTWRGSRLIFFSFMSNWPKEGCSL