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Spg024918 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024918
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionC2H2-like zinc finger protein
Genome locationscaffold12:14987135..14987611
RNA-Seq ExpressionSpg024918
SyntenySpg024918
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR044303 - Zinc finger protein ZAT1/4/9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6431040.1 hypothetical protein SASPL_109115 [Salvia splendens]1.1e-0639.34Show/hide
Query:  MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIW-KFKCKKCKKV
        +GGHMRSH  K  +     PSSS+      S         +T+PE      E VA CL MMSRD         W   Y+  +EE  ++  K++C++CKK+
Subjt:  MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIW-KFKCKKCKKV

Query:  FSSYQALGGHNASCHRRMNNNG
        F SYQALGGH AS H+++   G
Subjt:  FSSYQALGGHNASCHRRMNNNG

PWA44058.1 Cys2/His2 zinc-finger transcription factor [Artemisia annua]3.0e-0938.41Show/hide
Query:  MGGHMRSHFSKATSMRRPSPSSSD------------LVRERRSKR-RRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSV
        +GGHMRSH    +S   P  SSS+              R RRSKR RR +E++  S        E VA+CL M+SRD         W    +D E ++S 
Subjt:  MGGHMRSHFSKATSMRRPSPSSSD------------LVRERRSKR-RRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSV

Query:  IWKFKCKKCKKVFSSYQALGGHNASCHRRM--NNNGEDHLENFSYYRNIRN
          +F+C+ C KVF SYQALGGH AS H++M  N    DH        NI++
Subjt:  IWKFKCKKCKKVFSSYQALGGHNASCHRRM--NNNGEDHLENFSYYRNIRN

XP_023908135.1 zinc finger protein ZAT9-like [Quercus suber]1.4e-0642.37Show/hide
Query:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRK---------DFDRDWEEEYEDNEEEDSVI----------WKFKCKKCKKVFSSYQALGGH
        RRSKR R   K ET P     SAEEVA  L  +S+D   K         + D++ E++ E+ E+ED  +           KF+C+ C+KVF SYQALGGH
Subjt:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRK---------DFDRDWEEEYEDNEEEDSVI----------WKFKCKKCKKVFSSYQALGGH

Query:  NASCHRRMNNNGEDHLEN
         AS H+++ NN ED LE+
Subjt:  NASCHRRMNNNGEDHLEN

XP_030936898.1 zinc finger protein ZAT4-like [Quercus lobata]1.1e-0643.22Show/hide
Query:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRK---------DFDRDWEEEYEDNEEEDSVI----------WKFKCKKCKKVFSSYQALGGH
        RRSKR R   K ET P     SAEEVA  L  +S+D   K         + D++ E++ E+ E+ED  I           KF+C+ C+KVF SYQALGGH
Subjt:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRK---------DFDRDWEEEYEDNEEEDSVI----------WKFKCKKCKKVFSSYQALGGH

Query:  NASCHRRMNNNGEDHLEN
         AS H+++ NN ED LE+
Subjt:  NASCHRRMNNNGEDHLEN

XP_042051635.1 zinc finger protein ZAT9-like [Salvia splendens]1.1e-0639.34Show/hide
Query:  MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIW-KFKCKKCKKV
        +GGHMRSH  K  +     PSSS+      S         +T+PE      E VA CL MMSRD         W   Y+  +EE  ++  K++C++CKK+
Subjt:  MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIW-KFKCKKCKKV

Query:  FSSYQALGGHNASCHRRMNNNG
        F SYQALGGH AS H+++   G
Subjt:  FSSYQALGGHNASCHRRMNNNG

TrEMBL top hitse value%identityAlignment
A0A067E3Y0 Uncharacterized protein1.2e-0632.61Show/hide
Query:  MGGHMRSHFSK---ATSMRRPSP----------------------------------SSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSR
        MGGHMRSHF+K   ++S   PSP                                  SS +L + R  +  R  E    S  +  LS  EVA CL  +SR
Subjt:  MGGHMRSHFSK---ATSMRRPSP----------------------------------SSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSR

Query:  DG----------------------GRKDFDRDWEEEYEDNEEEDSVIW---KFKCKKCKKVFSSYQALGGHNASCHR-RMNNNG
        D                       G+ D D D +EE +  E+E S++    K+KCK CKK F SYQALGGH AS  + ++++NG
Subjt:  DG----------------------GRKDFDRDWEEEYEDNEEEDSVIW---KFKCKKCKKVFSSYQALGGHNASCHR-RMNNNG

A0A2U1L4X8 Cys2/His2 zinc-finger transcription factor1.5e-0938.41Show/hide
Query:  MGGHMRSHFSKATSMRRPSPSSSD------------LVRERRSKR-RRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSV
        +GGHMRSH    +S   P  SSS+              R RRSKR RR +E++  S        E VA+CL M+SRD         W    +D E ++S 
Subjt:  MGGHMRSHFSKATSMRRPSPSSSD------------LVRERRSKR-RRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSV

Query:  IWKFKCKKCKKVFSSYQALGGHNASCHRRM--NNNGEDHLENFSYYRNIRN
          +F+C+ C KVF SYQALGGH AS H++M  N    DH        NI++
Subjt:  IWKFKCKKCKKVFSSYQALGGHNASCHRRM--NNNGEDHLENFSYYRNIRN

A0A4D9BLD4 Uncharacterized protein5.2e-0739.34Show/hide
Query:  MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIW-KFKCKKCKKV
        +GGHMRSH  K  +     PSSS+      S         +T+PE      E VA CL MMSRD         W   Y+  +EE  ++  K++C++CKK+
Subjt:  MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIW-KFKCKKCKKV

Query:  FSSYQALGGHNASCHRRMNNNG
        F SYQALGGH AS H+++   G
Subjt:  FSSYQALGGHNASCHRRMNNNG

A0A6J1DXK2 zinc finger protein ZAT1-like1.2e-0640Show/hide
Query:  MGGHMRSHFSK------------ATSMRRPSPSS-----SDLVRER-----RSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDR--DWEE
        MGGHMRSH  K               M  P P+S     SD   E      + +RRR  ++      DP +     A  L MMSRD   +   +  D E 
Subjt:  MGGHMRSHFSK------------ATSMRRPSPSS-----SDLVRER-----RSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDR--DWEE

Query:  EY----EDNEEEDSVIWKFKCKKCKKVFSSYQALGGHNAS
         Y    ED E+ DS IWKFKCK C K F SYQALGGH AS
Subjt:  EY----EDNEEEDSVIWKFKCKKCKKVFSSYQALGGHNAS

A0A7N2MIL6 Uncharacterized protein5.2e-0743.22Show/hide
Query:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRK---------DFDRDWEEEYEDNEEEDSVI----------WKFKCKKCKKVFSSYQALGGH
        RRSKR R   K ET P     SAEEVA  L  +S+D   K         + D++ E++ E+ E+ED  I           KF+C+ C+KVF SYQALGGH
Subjt:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRK---------DFDRDWEEEYEDNEEEDSVI----------WKFKCKKCKKVFSSYQALGGH

Query:  NASCHRRMNNNGEDHLEN
         AS H+++ NN ED LE+
Subjt:  NASCHRRMNNNGEDHLEN

SwissProt top hitse value%identityAlignment
O22533 Zinc finger protein ZAT65.2e-0436.56Show/hide
Query:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK-----FKCKKCKKVFSSYQALGGHNASCHRR
        +RSKR R +   ++  ED     E +A CL +++RDG     DR+ + +   +     ++       +KC  C K FSSYQALGGH AS HR+
Subjt:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK-----FKCKKCKKVFSSYQALGGHNASCHRR

Q39092 Zinc finger protein ZAT13.2e-0636.36Show/hide
Query:  DEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK------FKCKKCKKVFSSYQALGGHNASCHRRM---NNNGEDHLE
        +++  +S  D   + E+VA  L ++SRD         WE+E E+++EE    WK      F+C+ C+KVF SYQALGGH AS  +++   +  G D L+
Subjt:  DEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK------FKCKKCKKVFSSYQALGGHNASCHRRM---NNNGEDHLE

Q9M202 Zinc finger protein ZAT96.5e-0731.01Show/hide
Query:  DLVRERRSKRRRGDE-------------KAETSPEDPILSA------EEVAWCLYMMSRDGGRKD-FDRDWEEEYEDNEEED--------SVIWKFKCKK
        +L R+R  + R+ D              K E+  E P  SA      E++A+CL M+SRD  +K+  +++  EE E  EE +        +   ++KC+ 
Subjt:  DLVRERRSKRRRGDE-------------KAETSPEDPILSA------EEVAWCLYMMSRDGGRKD-FDRDWEEEYEDNEEED--------SVIWKFKCKK

Query:  CKKVFSSYQALGGHNASCHRRMNNNGEDHLENFSYYRNIRNFPVRQMARQICMHHTAS
        C KVF SYQALGGH AS  +   +N +    + + Y N+     R     IC+   AS
Subjt:  CKKVFSSYQALGGHNASCHRRMNNNGEDHLENFSYYRNIRNFPVRQMARQICMHHTAS

Q9SHD0 Zinc finger protein ZAT41.0e-0434.62Show/hide
Query:  FSKATSMRRPSPSSSDLVRERRSKRRR-------GDEKAETSPEDPIL-------------SAEEVAWCLYMMSRDGGR--KDFDRDWEEEYEDNEEEDS
        F++   +   + SS      RRSKR R         EK  TS    ++             + E++A+CL M+SRD  +  K   +  EE+  D++ ED 
Subjt:  FSKATSMRRPSPSSSDLVRERRSKRRR-------GDEKAETSPEDPIL-------------SAEEVAWCLYMMSRDGGR--KDFDRDWEEEYEDNEEEDS

Query:  VIWK----FKCKKCKKVFSSYQALGGHNAS
           K    FKC+ C KVF SYQALGGH AS
Subjt:  VIWK----FKCKKCKKVFSSYQALGGHNAS

Q9SSW0 Zinc finger protein AZF33.6e-0537.5Show/hide
Query:  ERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWKFKCKKCKKVFSSYQALGGHNASCHRRMNNNGED
        ++RSKR R D          +   E +A+CL +++RDGG  D     E+              +KC  C K FSSYQALGGH AS HR +   GE+
Subjt:  ERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWKFKCKKCKKVFSSYQALGGHNASCHRRMNNNGED

Arabidopsis top hitse value%identityAlignment
AT1G02030.1 C2H2-like zinc finger protein2.3e-0736.36Show/hide
Query:  DEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK------FKCKKCKKVFSSYQALGGHNASCHRRM---NNNGEDHLE
        +++  +S  D   + E+VA  L ++SRD         WE+E E+++EE    WK      F+C+ C+KVF SYQALGGH AS  +++   +  G D L+
Subjt:  DEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK------FKCKKCKKVFSSYQALGGHNASCHRRM---NNNGEDHLE

AT2G45120.1 C2H2-like zinc finger protein7.4e-0634.62Show/hide
Query:  FSKATSMRRPSPSSSDLVRERRSKRRR-------GDEKAETSPEDPIL-------------SAEEVAWCLYMMSRDGGR--KDFDRDWEEEYEDNEEEDS
        F++   +   + SS      RRSKR R         EK  TS    ++             + E++A+CL M+SRD  +  K   +  EE+  D++ ED 
Subjt:  FSKATSMRRPSPSSSDLVRERRSKRRR-------GDEKAETSPEDPIL-------------SAEEVAWCLYMMSRDGGR--KDFDRDWEEEYEDNEEEDS

Query:  VIWK----FKCKKCKKVFSSYQALGGHNAS
           K    FKC+ C KVF SYQALGGH AS
Subjt:  VIWK----FKCKKCKKVFSSYQALGGHNAS

AT3G60580.1 C2H2-like zinc finger protein4.6e-0831.01Show/hide
Query:  DLVRERRSKRRRGDE-------------KAETSPEDPILSA------EEVAWCLYMMSRDGGRKD-FDRDWEEEYEDNEEED--------SVIWKFKCKK
        +L R+R  + R+ D              K E+  E P  SA      E++A+CL M+SRD  +K+  +++  EE E  EE +        +   ++KC+ 
Subjt:  DLVRERRSKRRRGDE-------------KAETSPEDPILSA------EEVAWCLYMMSRDGGRKD-FDRDWEEEYEDNEEED--------SVIWKFKCKK

Query:  CKKVFSSYQALGGHNASCHRRMNNNGEDHLENFSYYRNIRNFPVRQMARQICMHHTAS
        C KVF SYQALGGH AS  +   +N +    + + Y N+     R     IC+   AS
Subjt:  CKKVFSSYQALGGHNASCHRRMNNNGEDHLENFSYYRNIRNFPVRQMARQICMHHTAS

AT5G04340.1 zinc finger of Arabidopsis thaliana 63.7e-0536.56Show/hide
Query:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK-----FKCKKCKKVFSSYQALGGHNASCHRR
        +RSKR R +   ++  ED     E +A CL +++RDG     DR+ + +   +     ++       +KC  C K FSSYQALGGH AS HR+
Subjt:  RRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWK-----FKCKKCKKVFSSYQALGGHNASCHRR

AT5G43170.1 zinc-finger protein 32.5e-0637.5Show/hide
Query:  ERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWKFKCKKCKKVFSSYQALGGHNASCHRRMNNNGED
        ++RSKR R D          +   E +A+CL +++RDGG  D     E+              +KC  C K FSSYQALGGH AS HR +   GE+
Subjt:  ERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWKFKCKKCKKVFSSYQALGGHNASCHRRMNNNGED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGCCACATGCGATCCCATTTCTCCAAGGCGACATCCATGCGTCGGCCATCTCCATCCTCTTCTGACTTGGTTCGAGAGCGGCGGTCAAAGCGGCGTCGGGGCGA
TGAGAAAGCGGAGACATCGCCGGAGGATCCCATCTTGTCAGCAGAGGAAGTGGCATGGTGTCTTTATATGATGTCGAGGGATGGAGGAAGGAAAGATTTTGATAGAGATT
GGGAAGAAGAATATGAAGATAATGAGGAGGAAGATTCGGTGATATGGAAATTCAAATGCAAAAAGTGCAAGAAAGTGTTTAGTTCATATCAAGCACTTGGAGGGCACAAT
GCGAGCTGCCACAGGAGAATGAACAATAATGGAGAAGATCATCTGGAAAATTTCTCATACTATCGTAATATTAGAAATTTTCCTGTTAGACAGATGGCTCGTCAGATATG
CATGCATCACACAGCTAGTGATTTCCTTTTCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGCCACATGCGATCCCATTTCTCCAAGGCGACATCCATGCGTCGGCCATCTCCATCCTCTTCTGACTTGGTTCGAGAGCGGCGGTCAAAGCGGCGTCGGGGCGA
TGAGAAAGCGGAGACATCGCCGGAGGATCCCATCTTGTCAGCAGAGGAAGTGGCATGGTGTCTTTATATGATGTCGAGGGATGGAGGAAGGAAAGATTTTGATAGAGATT
GGGAAGAAGAATATGAAGATAATGAGGAGGAAGATTCGGTGATATGGAAATTCAAATGCAAAAAGTGCAAGAAAGTGTTTAGTTCATATCAAGCACTTGGAGGGCACAAT
GCGAGCTGCCACAGGAGAATGAACAATAATGGAGAAGATCATCTGGAAAATTTCTCATACTATCGTAATATTAGAAATTTTCCTGTTAGACAGATGGCTCGTCAGATATG
CATGCATCACACAGCTAGTGATTTCCTTTTCCAATAG
Protein sequenceShow/hide protein sequence
MGGHMRSHFSKATSMRRPSPSSSDLVRERRSKRRRGDEKAETSPEDPILSAEEVAWCLYMMSRDGGRKDFDRDWEEEYEDNEEEDSVIWKFKCKKCKKVFSSYQALGGHN
ASCHRRMNNNGEDHLENFSYYRNIRNFPVRQMARQICMHHTASDFLFQ