| GenBank top hits | e value | %identity | Alignment |
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| KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-26 | 69.07 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+ STWLELY +SV + F GS GI+RGDDVCWLHA+FRAK AGGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.3e-28 | 64.71 | Show/hide |
Query: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
L GN + SG + PLSTLSVLRDNDAVVEIELPVPDTLPTSAESS S+ STWLELY +SV F+VLVGSTGI+RGDD
Subjt: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
Query: VCWLHAVFRAKLAGGPGGG
VCWLHAVFRAK GGPGGG
Subjt: VCWLHAVFRAKLAGGPGGG
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| TYK05030.1 uncharacterized protein E5676_scaffold143G002850 [Cucumis melo var. makuwa] | 7.6e-29 | 39.31 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSS----FSTWLELYIQSVTFQTRFNVLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG----------
PLSTLSVL DNDAVVEIELPVPDTLPTSAES + +S L L++ + RFNV VGS GIIRGDDVCWLHAVFRAK+AG P GG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSS----FSTWLELYIQSVTFQTRFNVLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG----------
Query: ---------------------------------GRYRVA-----EKLESV--LSDFGAFLDELVWNLVFISSGYIPLSTLSVLRDNDA------------
GR +A EK+ + L GA + E + + ++R NDA
Subjt: ---------------------------------GRYRVA-----EKLESV--LSDFGAFLDELVWNLVFISSGYIPLSTLSVLRDNDA------------
Query: ------VVEIELPVPDTLPTSAES-------SRSSSSTWFNASVGSTGIVRGDDVCCLHAVFRAKLAGGPGGGVTPRLFLHACMDWALLL
+ E + L S + + + FN SVGST IVRGDDVC LHAVFRAK AGGPG GVT L + C D + +L
Subjt: ------VVEIELPVPDTLPTSAES-------SRSSSSTWFNASVGSTGIVRGDDVCCLHAVFRAKLAGGPGGGVTPRLFLHACMDWALLL
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 6.0e-26 | 69.07 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+ STWLELY +SV + F GS GI+RGDDVCWLHA+FRAK AGGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-28 | 64.71 | Show/hide |
Query: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
L GN + SG + PLSTLSVLRDNDAVVEIELPVPDTLPTSAESS S+ STWLELY +SV F+VLVGSTGI+RGDD
Subjt: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
Query: VCWLHAVFRAKLAGGPGGG
VCWLHAVFRAK GGPGGG
Subjt: VCWLHAVFRAKLAGGPGGG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 2.9e-26 | 69.07 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+ STWLELY +SV + F GS GI+RGDDVCWLHA+FRAK AGGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
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| A0A5A7V9N3 Reverse transcriptase | 6.2e-29 | 64.71 | Show/hide |
Query: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
L GN + SG + PLSTLSVLRDNDAVVEIELPVPDTLPTSAESS S+ STWLELY +SV F+VLVGSTGI+RGDD
Subjt: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
Query: VCWLHAVFRAKLAGGPGGG
VCWLHAVFRAK GGPGGG
Subjt: VCWLHAVFRAKLAGGPGGG
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| A0A5D3C0X3 Retrotrans_gag domain-containing protein | 3.7e-29 | 39.31 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSS----FSTWLELYIQSVTFQTRFNVLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG----------
PLSTLSVL DNDAVVEIELPVPDTLPTSAES + +S L L++ + RFNV VGS GIIRGDDVCWLHAVFRAK+AG P GG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSS----FSTWLELYIQSVTFQTRFNVLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG----------
Query: ---------------------------------GRYRVA-----EKLESV--LSDFGAFLDELVWNLVFISSGYIPLSTLSVLRDNDA------------
GR +A EK+ + L GA + E + + ++R NDA
Subjt: ---------------------------------GRYRVA-----EKLESV--LSDFGAFLDELVWNLVFISSGYIPLSTLSVLRDNDA------------
Query: ------VVEIELPVPDTLPTSAES-------SRSSSSTWFNASVGSTGIVRGDDVCCLHAVFRAKLAGGPGGGVTPRLFLHACMDWALLL
+ E + L S + + + FN SVGST IVRGDDVC LHAVFRAK AGGPG GVT L + C D + +L
Subjt: ------VVEIELPVPDTLPTSAES-------SRSSSSTWFNASVGSTGIVRGDDVCCLHAVFRAKLAGGPGGGVTPRLFLHACMDWALLL
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| A0A5D3DR18 Gag/pol protein | 2.9e-26 | 69.07 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELP+PDTLPTSAESS S+ STWLELY +SV + F GS GI+RGDDVCWLHA+FRAK AGGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSVTFQTRFN-----------VLVGSTGIIRGDDVCWLHAVFRAKLAGGPGGG
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| A0A5D3DSY7 Putative Retrotransposon protein | 6.2e-29 | 64.71 | Show/hide |
Query: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
L GN + SG + PLSTLSVLRDNDAVVEIELPVPDTLPTSAESS S+ STWLELY +SV F+VLVGSTGI+RGDD
Subjt: LVGNLVFISSGYI------PLSTLSVLRDNDAVVEIELPVPDTLPTSAESSRSSFSTWLELYIQSV--------------TFQTRFNVLVGSTGIIRGDD
Query: VCWLHAVFRAKLAGGPGGG
VCWLHAVFRAK GGPGGG
Subjt: VCWLHAVFRAKLAGGPGGG
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