; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024955 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024955
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptiontRNA pseudouridine synthase
Genome locationscaffold12:13747905..13750293
RNA-Seq ExpressionSpg024955
SyntenySpg024955
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0008033 - tRNA processing (biological process)
GO:0034196 - acylglycerol transport (biological process)
GO:1990052 - ER to chloroplast lipid transport (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0070300 - phosphatidic acid binding (molecular function)
GO:0106029 - tRNA pseudouridine synthase activity (molecular function)
InterPro domainsIPR001406 - Pseudouridine synthase I, TruA
IPR020094 - Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 - Pseudouridine synthase I, TruA, C-terminal
IPR020097 - Pseudouridine synthase I, TruA, alpha/beta domain
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458280.1 PREDICTED: tRNA pseudouridine synthase A 1 isoform X2 [Cucumis melo]1.3e-13975.07Show/hide
Query:  MALHLPPIVDSRMQRIPVMSQSPLSLALNGGWSLLMTVRDMQVNGNSNRLKLLRHDLGSGVNYELTQILHSCAYYYNFEALFCLIENALTRATKLERKDL
        MALHLPP+VDSRM+RIP++SQSPLS A NGG S LMTV DMQ +                                    + CLIE AL  ATKLERKDL
Subjt:  MALHLPPIVDSRMQRIPVMSQSPLSLALNGGWSLLMTVRDMQVNGNSNRLKLLRHDLGSGVNYELTQILHSCAYYYNFEALFCLIENALTRATKLERKDL

Query:  RLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLNYAAMRE
         LVGASRTD GVHAWGQVAHF+TPFNYDSL++VHAALNGLLP DIRVRE+SPA PDFHARFST+SKVYHYKIYNGTI+DPFQRCYTYHCVYKLNYAAM+E
Subjt:  RLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLNYAAMRE

Query:  AANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGL
        AANYF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVIEMG LVQLEVEGSGFLYRQVRNMV LL+QIGKEA+ P+VVPKILAS DRKELAKYA  +PPQGL
Subjt:  AANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGL

Query:  CLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        CL+SINYKEDHLKLPS CPGTS GR  SV KCK+PFY
Subjt:  CLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023549333.1 uncharacterized protein LOC111807720 isoform X1 [Cucurbita pepo subsp. pepo]2.1e-13289.8Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CLIE ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILA+
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRKELAKY  CIPP GLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023549334.1 uncharacterized protein LOC111807720 isoform X2 [Cucurbita pepo subsp. pepo]2.1e-13289.8Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CLIE ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILA+
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRKELAKY  CIPP GLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023549335.1 uncharacterized protein LOC111807720 isoform X3 [Cucurbita pepo subsp. pepo]2.1e-13289.8Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CLIE ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILA+
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRKELAKY  CIPP GLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

XP_023549337.1 uncharacterized protein LOC111807720 isoform X4 [Cucurbita pepo subsp. pepo]2.1e-13289.8Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CLIE ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFANAAHNDRVV+PVKV+FRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILA+
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRKELAKY  CIPP GLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

TrEMBL top hitse value%identityAlignment
A0A1S3C7H4 tRNA pseudouridine synthase6.5e-14075.07Show/hide
Query:  MALHLPPIVDSRMQRIPVMSQSPLSLALNGGWSLLMTVRDMQVNGNSNRLKLLRHDLGSGVNYELTQILHSCAYYYNFEALFCLIENALTRATKLERKDL
        MALHLPP+VDSRM+RIP++SQSPLS A NGG S LMTV DMQ +                                    + CLIE AL  ATKLERKDL
Subjt:  MALHLPPIVDSRMQRIPVMSQSPLSLALNGGWSLLMTVRDMQVNGNSNRLKLLRHDLGSGVNYELTQILHSCAYYYNFEALFCLIENALTRATKLERKDL

Query:  RLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLNYAAMRE
         LVGASRTD GVHAWGQVAHF+TPFNYDSL++VHAALNGLLP DIRVRE+SPA PDFHARFST+SKVYHYKIYNGTI+DPFQRCYTYHCVYKLNYAAM+E
Subjt:  RLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLNYAAMRE

Query:  AANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGL
        AANYF+GKHDFSAF NAAHN+RVV+PVKVIFRFDVIEMG LVQLEVEGSGFLYRQVRNMV LL+QIGKEA+ P+VVPKILAS DRKELAKYA  +PPQGL
Subjt:  AANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGL

Query:  CLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        CL+SINYKEDHLKLPS CPGTS GR  SV KCK+PFY
Subjt:  CLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1H4M7 tRNA pseudouridine synthase2.2e-13289.02Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CL+E ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVRE+SPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PD+VPKILA+
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRKELAKY  CIPPQGLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1H621 tRNA pseudouridine synthase2.2e-13289.02Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CL+E ALT AT+LERKDL LVGASRTDTGVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVRE+SPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PD+VPKILA+
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRKELAKY  CIPPQGLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1L0L1 tRNA pseudouridine synthase8.4e-13289.8Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CLIE ALT AT+LERKDL LVGASRTD GVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILAS
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRK LAKY  CIPPQGLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

A0A6J1L2M8 tRNA pseudouridine synthase8.4e-13289.8Show/hide
Query:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ
        CLIE ALT AT+LERKDL LVGASRTD GVHAWGQVAHFITPFNYDSLD +HAALNGLLPADIRVREISPAVPDFHARFST+SKVYHYKIYN  ILDPFQ
Subjt:  CLIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQ

Query:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS
        RCYTYHCVYKLNYAAM+EAANYF+GKHDFSAFAN AHNDRVV+PVKVIFRFDVIEMG L+QLEVEGSGFLYRQVRNMVALL+QIGKEAI PDVVPKILAS
Subjt:  RCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILAS

Query:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
         DRK LAKY  CIPPQGLCL+ INYKEDHLKLPS CPGTSFGR HSVSKCKLPFY
Subjt:  GDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY

SwissProt top hitse value%identityAlignment
A3DJK8 tRNA pseudouridine synthase A1.2e-3438.84Show/hide
Query:  IENALTRATK-LERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR
        +++ + RA K L  + + L+GASRTD GVHA GQVA+FIT       D    ALN +LP DI ++E      DFHAR+    K Y Y IYN        R
Subjt:  IENALTRATK-LERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR

Query:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG
          TYH  +KL++ +M+ AA+YF+G HDFSAF ++  + +    V+ I    +     +V+ E+ G GFLY  VR +V  L+++G   I  D +P+I+ S 
Subjt:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG

Query:  DRKELAKYAPCIPPQGLCLMSINY
         RK   + AP    +GL L+ + Y
Subjt:  DRKELAKYAPCIPPQGLCLMSINY

A4J151 tRNA pseudouridine synthase A6.2e-3940.18Show/hide
Query:  IENALTRA-TKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR
        I+ AL +A + + +  ++++GA RTD GVHA GQV +F +       +    ALN LLP DI+V +      DFHARFS ++K Y Y IY+  ++ PF R
Subjt:  IENALTRA-TKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR

Query:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG
         Y YH   +L+  AM+E A Y +G +DF +F   A    V D ++ I+R D+IE  P++ L + G+GFLY  VR +   L+ IG   I P+ + KI+ S 
Subjt:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG

Query:  DRKELAKYAPCIPPQGLCLMSINY
        +R      A   PPQGLCLM + Y
Subjt:  DRKELAKYAPCIPPQGLCLMSINY

B1I1B5 tRNA pseudouridine synthase A2.1e-4241.96Show/hide
Query:  IENALTRA-TKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR
        I+  L R   +L    L++ GASRTD GVHA GQV +F+T       + + AALNG+LP DI   +      DFHAR+S ++K Y Y +YN  +  PFQR
Subjt:  IENALTRA-TKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR

Query:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG
         Y+ H    L+  AMR AA + +G+HDFS F  A     V   V+ + R D+    PLV+L     GFLY  VR M   L+++G E + P+ +P I+ASG
Subjt:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG

Query:  DRKELAKYAPCIPPQGLCLMSINY
        DR   A+  P +PP GLCL  + Y
Subjt:  DRKELAKYAPCIPPQGLCLMSINY

P70973 tRNA pseudouridine synthase A9.2e-3540.36Show/hide
Query:  IENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRC
        +E AL    K  +  + +V + RTD+GVHA GQV HF TP +  + +    ALN LLP DI V++   A   FHARFS + K Y Y +Y     D F+R 
Subjt:  IENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRC

Query:  YTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGD
        Y YH  Y+LN   MREAA + IG HDF++F   A    V D V+ I+  D  E    +Q+ + GSGFLY  VR +   L+  G   I+PD V  +L + D
Subjt:  YTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGD

Query:  RKELAKYAPCIPPQGLCLMSINY
        R+   + A   P  GL L ++ Y
Subjt:  RKELAKYAPCIPPQGLCLMSINY

Q6MEE7 tRNA pseudouridine synthase A 11.6e-4239.91Show/hide
Query:  LERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLN
        L+++ + LVG+ RTD GVHA GQVAHF    +Y  L  +H +LNGLLP DIR++ + P  P FH+++S I K YHY ++   ++DPFQR Y++H   K++
Subjt:  LERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLN

Query:  YAAMREAANYFIGKHDFSAFANAAHNDRVV-DPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAP
           +++AA  F G HDF++FAN AH      +PV+ ++R D+      ++LE EG GFLY+ VRN+V  L+ +     A + + +I A+ +R++ +  A 
Subjt:  YAAMREAANYFIGKHDFSAFANAAHNDRVV-DPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAP

Query:  CIPPQGLCLMSINYKEDH
          PP+GL L+ + Y+ ++
Subjt:  CIPPQGLCLMSINYKEDH

Arabidopsis top hitse value%identityAlignment
AT1G34150.1 Pseudouridine synthase family protein1.7e-1232.39Show/hide
Query:  TRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNY-----DSLDNVHA------------ALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKI
        TR    ++KD       RTD GV + GQV              DS   V+              LN  LP DIRV   SPA  DFHARFS  ++ Y Y  
Subjt:  TRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNY-----DSLDNVHA------------ALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKI

Query:  YNGTILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAF-----ANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIG
        +                   LN +AM  A   FIG+HDF  F     AN     R V   +V    +  E   L    + GS FL+ Q+R MVA+L  IG
Subjt:  YNGTILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAF-----ANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIG

Query:  KEAIAPDVVPKIL
        +   + DV+  +L
Subjt:  KEAIAPDVVPKIL

AT3G06950.1 Pseudouridine synthase family protein1.6e-10370.2Show/hide
Query:  LIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR
        ++E AL + T+L RK+L+L+GA RTD GVHAWGQVAHF+TPFNY SLD+ HAALNGLLP DIRVRE+S AVP+FHARFS  SKVY Y+IYN T +DPFQR
Subjt:  LIENALTRATKLERKDLRLVGASRTDTGVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQR

Query:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG
         + YHC YKLN + MREAAN F+GKHDFSAFANA   D V DP+K I RFDVI+MG L+QLEVEGSGFLYRQVRNMVALLIQIGKEA+  D+VP IL + 
Subjt:  CYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHNDRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASG

Query:  DRKELAKYAPC-IPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY
        DR+ LAKY      P GLCL+S+ YKEDHLKLP  CP TS GR H+++KCKLPFY
Subjt:  DRKELAKYAPC-IPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVSKCKLPFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTTCATCTTCCACCAATCGTAGATTCCCGAATGCAGAGGATTCCTGTTATGTCACAGAGCCCCCTTTCCCTAGCTTTAAATGGCGGTTGGTCATTGCTTATGAC
GGTACGCGATATGCAGGTTAATGGTAATTCTAATCGGCTTAAGCTTTTGAGACATGATTTGGGTTCCGGTGTGAATTATGAGTTAACTCAGATATTGCATTCCTGCGCTT
ACTACTACAATTTTGAGGCTCTTTTCTGCCTGATTGAAAATGCCTTGACTCGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATACG
GGAGTTCATGCCTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTATGATAGCTTGGATAACGTTCATGCTGCTTTGAATGGTCTTCTTCCTGCGGATATAAGAGT
TCGGGAGATTAGTCCTGCTGTGCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGATATATAATGGCACCATCTTGGATCCATTTCAGCGGT
GCTACACTTACCATTGCGTTTATAAACTCAATTATGCAGCCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAAT
GATCGAGTGGTAGATCCAGTGAAGGTCATTTTTCGTTTTGACGTCATAGAAATGGGACCTCTTGTTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAGTTCG
GAATATGGTTGCCTTGTTGATTCAAATCGGAAAGGAAGCAATTGCTCCTGATGTTGTTCCTAAGATATTGGCCTCTGGAGATCGCAAGGAGCTTGCCAAGTATGCTCCGT
GCATTCCTCCGCAGGGGCTCTGTCTTATGAGTATTAATTATAAAGAGGACCATCTAAAGCTTCCATCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGC
AAATGTAAGCTCCCTTTCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTTCATCTTCCACCAATCGTAGATTCCCGAATGCAGAGGATTCCTGTTATGTCACAGAGCCCCCTTTCCCTAGCTTTAAATGGCGGTTGGTCATTGCTTATGAC
GGTACGCGATATGCAGGTTAATGGTAATTCTAATCGGCTTAAGCTTTTGAGACATGATTTGGGTTCCGGTGTGAATTATGAGTTAACTCAGATATTGCATTCCTGCGCTT
ACTACTACAATTTTGAGGCTCTTTTCTGCCTGATTGAAAATGCCTTGACTCGAGCAACAAAGCTTGAGAGGAAGGATCTCCGTTTAGTTGGTGCAAGCAGAACAGATACG
GGAGTTCATGCCTGGGGTCAGGTGGCACACTTTATTACGCCATTTAACTATGATAGCTTGGATAACGTTCATGCTGCTTTGAATGGTCTTCTTCCTGCGGATATAAGAGT
TCGGGAGATTAGTCCTGCTGTGCCTGACTTTCATGCTCGGTTTTCTACAATAAGCAAGGTTTATCACTACAAGATATATAATGGCACCATCTTGGATCCATTTCAGCGGT
GCTACACTTACCATTGCGTTTATAAACTCAATTATGCAGCCATGAGAGAAGCTGCAAATTATTTCATTGGAAAGCATGATTTTTCTGCTTTTGCAAATGCAGCACATAAT
GATCGAGTGGTAGATCCAGTGAAGGTCATTTTTCGTTTTGACGTCATAGAAATGGGACCTCTTGTTCAGCTAGAAGTTGAGGGTTCTGGGTTCTTGTATAGACAAGTTCG
GAATATGGTTGCCTTGTTGATTCAAATCGGAAAGGAAGCAATTGCTCCTGATGTTGTTCCTAAGATATTGGCCTCTGGAGATCGCAAGGAGCTTGCCAAGTATGCTCCGT
GCATTCCTCCGCAGGGGCTCTGTCTTATGAGTATTAATTATAAAGAGGACCATCTAAAGCTTCCATCTGGTTGCCCTGGGACTAGTTTTGGTAGGCGTCATAGTGTGAGC
AAATGTAAGCTCCCTTTCTATTGA
Protein sequenceShow/hide protein sequence
MALHLPPIVDSRMQRIPVMSQSPLSLALNGGWSLLMTVRDMQVNGNSNRLKLLRHDLGSGVNYELTQILHSCAYYYNFEALFCLIENALTRATKLERKDLRLVGASRTDT
GVHAWGQVAHFITPFNYDSLDNVHAALNGLLPADIRVREISPAVPDFHARFSTISKVYHYKIYNGTILDPFQRCYTYHCVYKLNYAAMREAANYFIGKHDFSAFANAAHN
DRVVDPVKVIFRFDVIEMGPLVQLEVEGSGFLYRQVRNMVALLIQIGKEAIAPDVVPKILASGDRKELAKYAPCIPPQGLCLMSINYKEDHLKLPSGCPGTSFGRRHSVS
KCKLPFY