; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024961 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024961
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein SINE3
Genome locationscaffold12:11856169..11857229
RNA-Seq ExpressionSpg024961
SyntenySpg024961
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575120.1 hypothetical protein SDJN03_25759, partial [Cucurbita argyrosperma subsp. sororia]1.2e-7872.46Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKRMKD QTPQRD AANRR RKP KIAK LTATFSSLSDDKIQ   K+DFSP SVVSD++++                +  F  FQS+L  VNPALSA 
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        CGSSL PDLSPSSVVTFDN QL+KV V+FSGSNDLDE   GSV AEIAVNSL +ALT+VLQSTDVDHQ+KKLIDAS+RIIV+DFLAIPQ+RD I QLISA
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+QVLS+ LF+WI+VLALAFFF+S VKSSF+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

XP_008458341.1 PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo]7.3e-7670.34Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKRMKD+QTPQR+   NRR RKPQKIAK LTA+FSSLS+DKI  I KE+ SP SVVSD++++S   S                   SFL GVNP  SA 
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C +SLFPDLSPSSVV+FDNE L+KVSVDFSGSND++EAS GS+EAEIAVNSLR+ALT+VL STDVDHQSKKLIDASMRIIV+DFLAIPQERD+IAQLIS 
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+ VLS+ +F+WIVVLA+AFF  SGVKSSF GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

XP_022930352.1 uncharacterized protein LOC111436822 [Cucurbita moschata]3.4e-7369.07Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKR K+YQTP RD AANRR +KP KI KSLTATFSS  DDKIQ I KEDFSP SVVS+I ++    S                   SFL  VNPALS S
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C SSLFP+LSPSSVVTFDN+QL+KV V+F GSN+LDEAS GSVEAEIAVN LR+AL++VLQSTDVDHQSKKLIDAS+RIIV++FLAIPQERD I +LIS+
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        KS VLSLGLF+WI+VL LAFF  SGV++ F+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

XP_022959315.1 uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata]8.0e-7569.92Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        ME+RMKD QTPQRD AANRR RKP KIAK LTATFSSLSDDKIQ   K+DFS  SVVSD++++                     + +SFL  VNPALSA 
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        CGSSL PDLSPSSVVTFDN QL+KV V+FSGSNDLDE   GSV AEIAV+SL +ALT+VLQSTDVDHQ+KKLIDAS+RIIV+DFLAIPQ+RD I Q+ISA
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+QVLS+ LF+WI+VLALAFFF+S VKSSF+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

XP_038876305.1 uncharacterized protein LOC120068561 [Benincasa hispida]8.3e-8072.88Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEK+MKDYQTPQRD  ANRR RKPQKIAK LTATFSSLSDDKIQ I KEDFSP SVV+DI+++    S                   +FL GVNPA SAS
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C +SLF DLSPSSVV+FDNEQL+KV V+FSGSND+DEAS GSVE +IAVNSLR+ALT+VLQSTDVDHQSKKLIDASM IIV+DFLAIPQERDQIAQLIS 
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+ VLSL +F+WI+VLA+AFF  SGVKSSF+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

TrEMBL top hitse value%identityAlignment
A0A1S4E1Y8 uncharacterized protein LOC1034977813.5e-7670.34Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKRMKD+QTPQR+   NRR RKPQKIAK LTA+FSSLS+DKI  I KE+ SP SVVSD++++S   S                   SFL GVNP  SA 
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C +SLFPDLSPSSVV+FDNE L+KVSVDFSGSND++EAS GS+EAEIAVNSLR+ALT+VL STDVDHQSKKLIDASMRIIV+DFLAIPQERD+IAQLIS 
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+ VLS+ +F+WIVVLA+AFF  SGVKSSF GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

A0A5D3BTA3 Uncharacterized protein3.5e-7670.34Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKRMKD+QTPQR+   NRR RKPQKIAK LTA+FSSLS+DKI  I KE+ SP SVVSD++++S   S                   SFL GVNP  SA 
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C +SLFPDLSPSSVV+FDNE L+KVSVDFSGSND++EAS GS+EAEIAVNSLR+ALT+VL STDVDHQSKKLIDASMRIIV+DFLAIPQERD+IAQLIS 
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+ VLS+ +F+WIVVLA+AFF  SGVKSSF GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

A0A6J1EQ83 uncharacterized protein LOC1114368221.6e-7369.07Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKR K+YQTP RD AANRR +KP KI KSLTATFSS  DDKIQ I KEDFSP SVVS+I ++    S                   SFL  VNPALS S
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C SSLFP+LSPSSVVTFDN+QL+KV V+F GSN+LDEAS GSVEAEIAVN LR+AL++VLQSTDVDHQSKKLIDAS+RIIV++FLAIPQERD I +LIS+
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        KS VLSLGLF+WI+VL LAFF  SGV++ F+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

A0A6J1H5Y6 uncharacterized protein LOC111460327 isoform X13.9e-7569.92Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        ME+RMKD QTPQRD AANRR RKP KIAK LTATFSSLSDDKIQ   K+DFS  SVVSD++++                     + +SFL  VNPALSA 
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        CGSSL PDLSPSSVVTFDN QL+KV V+FSGSNDLDE   GSV AEIAV+SL +ALT+VLQSTDVDHQ+KKLIDAS+RIIV+DFLAIPQ+RD I Q+ISA
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        K+QVLS+ LF+WI+VLALAFFF+S VKSSF+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

A0A6J1KL67 uncharacterized protein LOC1114942868.1e-7369.07Show/hide
Query:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS
        MEKR K+YQTP RD AANRR +KP KI KSLTATFSS  DDKIQ I KEDFSP SVVS+I ++    S                   SFL  VNPALS S
Subjt:  MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSAS

Query:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA
        C SSLFP+LSPSSVVTFDN+QL+KV V+F  SN+LDEAS GSVEAEIAVN LR+AL +VLQSTDVDHQSKKLIDAS+RIIV+DFLAIPQERD I +LIS+
Subjt:  CGSSLFPDLSPSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISA

Query:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT
        KS VLSLGLF+WI+VL LAFF  SGV++ F+GPLPT
Subjt:  KSQVLSLGLFMWIVVLALAFFFSSGVKSSFMGPLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGGATGAAAGATTACCAAACTCCGCAGAGAGATCCAGCGGCAAATCGTAGATTAAGGAAGCCTCAGAAGATCGCCAAGAGTTTGACTGCCACATTTTCATC
ACTTTCCGACGATAAAATCCAGCTAATTCCGAAGGAAGACTTCTCTCCGACTTCTGTTGTCTCAGATATCGACAGAGTAAGTTCCGATTCGTCTTTAATTTTTCGGACGA
TCGGAGATTCACTTGGAGTATTTAACTTTTCTCTATTTCAGAGTTTCTTGCTAGGTGTTAATCCGGCTCTTTCTGCTTCCTGCGGGAGCTCGCTTTTCCCCGATCTTTCT
CCATCTTCAGTCGTCACTTTTGACAATGAACAACTAGAGAAGGTTTCTGTTGATTTTTCTGGATCTAATGATTTAGATGAAGCAAGCGGTGGTTCAGTAGAGGCAGAGAT
TGCTGTGAATTCTTTAAGGCAGGCTTTAACTCGAGTCCTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGAGGACT
TCCTTGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCAGGTTCTGTCTCTAGGTTTATTCATGTGGATCGTCGTCTTGGCTTTAGCTTTC
TTTTTTAGTTCGGGAGTCAAGAGCTCTTTCATGGGGCCACTGCCGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAGGATGAAAGATTACCAAACTCCGCAGAGAGATCCAGCGGCAAATCGTAGATTAAGGAAGCCTCAGAAGATCGCCAAGAGTTTGACTGCCACATTTTCATC
ACTTTCCGACGATAAAATCCAGCTAATTCCGAAGGAAGACTTCTCTCCGACTTCTGTTGTCTCAGATATCGACAGAGTAAGTTCCGATTCGTCTTTAATTTTTCGGACGA
TCGGAGATTCACTTGGAGTATTTAACTTTTCTCTATTTCAGAGTTTCTTGCTAGGTGTTAATCCGGCTCTTTCTGCTTCCTGCGGGAGCTCGCTTTTCCCCGATCTTTCT
CCATCTTCAGTCGTCACTTTTGACAATGAACAACTAGAGAAGGTTTCTGTTGATTTTTCTGGATCTAATGATTTAGATGAAGCAAGCGGTGGTTCAGTAGAGGCAGAGAT
TGCTGTGAATTCTTTAAGGCAGGCTTTAACTCGAGTCCTGCAATCGACGGATGTTGATCATCAGTCTAAGAAGCTTATAGATGCATCCATGAGGATCATTGTGGAGGACT
TCCTTGCTATACCTCAAGAGCGAGACCAGATTGCTCAACTTATTTCTGCCAAAAGTCAGGTTCTGTCTCTAGGTTTATTCATGTGGATCGTCGTCTTGGCTTTAGCTTTC
TTTTTTAGTTCGGGAGTCAAGAGCTCTTTCATGGGGCCACTGCCGACTTAA
Protein sequenceShow/hide protein sequence
MEKRMKDYQTPQRDPAANRRLRKPQKIAKSLTATFSSLSDDKIQLIPKEDFSPTSVVSDIDRVSSDSSLIFRTIGDSLGVFNFSLFQSFLLGVNPALSASCGSSLFPDLS
PSSVVTFDNEQLEKVSVDFSGSNDLDEASGGSVEAEIAVNSLRQALTRVLQSTDVDHQSKKLIDASMRIIVEDFLAIPQERDQIAQLISAKSQVLSLGLFMWIVVLALAF
FFSSGVKSSFMGPLPT