; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg024975 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024975
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold12:13175901..13185464
RNA-Seq ExpressionSpg024975
SyntenySpg024975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]3.8e-0954.55Show/hide
Query:  LKVDSS---PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIP
        L++ SS   PTDPL+NNWF VQPIN+ P        P VQ  +S L GTT LLS  WVGVN     YVPSY P+ IP
Subjt:  LKVDSS---PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIP

KAA0047869.1 hypothetical protein E6C27_scaffold133G001380 [Cucumis melo var. makuwa]7.6e-1853.64Show/hide
Query:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS
        PTDPL+NNWF VQ IN  P        P VQ  +S L GTT LLS  WVGVNS  H    +   V  P+    L +R     TY DLRI  N+Q+FIVSS
Subjt:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS

Query:  GLRSSYLGHH
        GLRSSYLGHH
Subjt:  GLRSSYLGHH

KAA0051788.1 hypothetical protein E6C27_scaffold60G001950 [Cucumis melo var. makuwa]2.0e-1046.08Show/hide
Query:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS
        PTDPL+NNWF VQPIN  P          +Q  +S L GTT LLS  WVGVNS  H       P+ +  +            T  DLRI PN+Q FIVSS
Subjt:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS

Query:  GL
        GL
Subjt:  GL

TYK16320.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]1.9e-0868.52Show/hide
Query:  YVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSSGLRSSYLGHHM
        YVPSY     PEMGGLL +RY A LTYADLRI  N+Q+FIVS GLRSSYLG  +
Subjt:  YVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSSGLRSSYLGHHM

TYK30622.1 hypothetical protein E5676_scaffold84664G00370 [Cucumis melo var. makuwa]1.9e-0856Show/hide
Query:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDY-VPSYLPVPIPEMGGLL
        PTDPL+NNWF VQPIN  P        P VQ  +S L GTT LLS  WVGVNS  H   + SYL     EMGGLL
Subjt:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDY-VPSYLPVPIPEMGGLL

TrEMBL top hitse value%identityAlignment
A0A5A7T9D5 Uncharacterized protein9.1e-0956Show/hide
Query:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDY-VPSYLPVPIPEMGGLL
        PTDPL+NNWF VQPIN  P        P VQ  +S L GTT LLS  WVGVNS  H   + SYL     EMGGLL
Subjt:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDY-VPSYLPVPIPEMGGLL

A0A5A7U348 Uncharacterized protein3.7e-1853.64Show/hide
Query:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS
        PTDPL+NNWF VQ IN  P        P VQ  +S L GTT LLS  WVGVNS  H    +   V  P+    L +R     TY DLRI  N+Q+FIVSS
Subjt:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS

Query:  GLRSSYLGHH
        GLRSSYLGHH
Subjt:  GLRSSYLGHH

A0A5A7U922 Uncharacterized protein9.7e-1146.08Show/hide
Query:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS
        PTDPL+NNWF VQPIN  P          +Q  +S L GTT LLS  WVGVNS  H       P+ +  +            T  DLRI PN+Q FIVSS
Subjt:  PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSS

Query:  GL
        GL
Subjt:  GL

A0A5D3CY86 Retrotransposon protein, putative, Ty3-gypsy subclass9.1e-0968.52Show/hide
Query:  YVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSSGLRSSYLGHHM
        YVPSY     PEMGGLL +RY A LTYADLRI  N+Q+FIVS GLRSSYLG  +
Subjt:  YVPSYLPVPIPEMGGLLSRRYGATLTYADLRISPNKQEFIVSSGLRSSYLGHHM

A0A5D3DRY2 Gag-protease polyprotein1.8e-0954.55Show/hide
Query:  LKVDSS---PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIP
        L++ SS   PTDPL+NNWF VQPIN+ P        P VQ  +S L GTT LLS  WVGVN     YVPSY P+ IP
Subjt:  LKVDSS---PTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATACGGAAGCATTTTTGTAGAGAAGGGCATGTGGCTGACGAAATAAGACGTCCTCTTCTCAAGGTTTTCTTCGCCCTGAGGGACGAAATCAGCCTGCCTCACGA
TGGGCCCAAGCCCATGCACCTGGTCACCCTTAGCATAAGGCCGAGGCTGAGGAGGATCACGACTAGTGACGATTTCGTTACATCCCCTGATGTTGACGAGTTTTACTCCG
ACGAGAGATCTCATAGTTCTAGTGTCTATAGGGATCCCTCATTTTCGAAAGACAGTGACTATGAACCTCCCGCTCATCCTTCGACTTTGTCATCCTCGATGACCGAGGCT
CAACTTCAGCGCCTACGGTACGAGTATGATATTTCCGAAGATGTGCATTTACGGGTTCCCAGTCCTGATCTTATTGATAATAATCAATGGCCAGGATCGATTAGGGAAGT
TACAAGATCGTGTACCTTCCCTCTCCCTTCTATACGTGGTCCTCACCGGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAACCCGAAGCGTAAAATGACCATTTTGC
CCCTGAAGCCTCATCAGCGTCGAGACGCCCATCATCAGAGTCGAGACGCTAGCCAAATAAGGAAGCTACTTGGAGATCAAGCTGGCGACAGCGTCGCGACGCTAGGGCAA
TCCGAGAGCAACTTTCCATATTTGAAGGGACAGCGTCGCGACACTAGACATTCTTTGTCTATAAGTTTAGAATGTGGTAAGTCTCTTGAGGATCAAATTTATGAGCTTGC
TAAAAATACTCTTCAGTTTCAGGAAAGTACTCGAGCTGAGTTGAAAGGCATGTATGATAATATTGATAAGATAGAAACACATGTGACAAAACTGGGGAAGCATGTAGAGC
AACAAGCGCAACTGACCCAAGAGATAATCCTTACAACAGAAGTTCCCTTCGTTGCAAAGGTTGATGATGAAGAAATTGAGTGTCCATTGCCATCTCACGATCGATCATGT
GAGGTTAAAGAAGAATCTGAACCAGATTGCAAGGAAACTCTGGTGATAGAGTTTCAGGCTGATGAATCTGAATTTGTTCTTCCCCTTGATCTCCCTTCATCTGATTTATC
TTCTAAGCTGACAACCCTTAGAGTCTTCCTTACTATTCTCCGGGCCAAGAACAACTTGTGGGAGTCTATAAAGATAGGGAATGGGAAGGGAATGCTTGAAGGATCAAGCT
ATAGAGAAGTATGTGAAATGAGAGAGTTTGAGTCAAAATTCCAGCAGCATAACAATAAGGAAATGGCTCTCTTCTTTGATGAATCTGATTCATACTCATTATATAGACAT
CTACCATGCAAGGAGAAGCCTTATGACACAAGACACATGGTGAAATTGCAACTCAAAGTGGATTCTAGTCCCACTGATCCTCTAATGAACAATTGGTTTATGGTCCAACC
AATAAACCGAGTCCCTCTCGGGCCAATGAGAGGGAGGGATCCCTTTGTTCAAGCCCCAGAGTCAGCACTTAACGGAACAACCTCTCTACTATCCCTAATTTGGGTAGGAG
TGAATTCCTTCTCGCACGACTATGTCCCCAGCTATTTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACGGAGCCACTCTCACCTATGCAGATCTA
AGGATAAGCCCGAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCACATGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCATACGGAAGCATTTTTGTAGAGAAGGGCATGTGGCTGACGAAATAAGACGTCCTCTTCTCAAGGTTTTCTTCGCCCTGAGGGACGAAATCAGCCTGCCTCACGA
TGGGCCCAAGCCCATGCACCTGGTCACCCTTAGCATAAGGCCGAGGCTGAGGAGGATCACGACTAGTGACGATTTCGTTACATCCCCTGATGTTGACGAGTTTTACTCCG
ACGAGAGATCTCATAGTTCTAGTGTCTATAGGGATCCCTCATTTTCGAAAGACAGTGACTATGAACCTCCCGCTCATCCTTCGACTTTGTCATCCTCGATGACCGAGGCT
CAACTTCAGCGCCTACGGTACGAGTATGATATTTCCGAAGATGTGCATTTACGGGTTCCCAGTCCTGATCTTATTGATAATAATCAATGGCCAGGATCGATTAGGGAAGT
TACAAGATCGTGTACCTTCCCTCTCCCTTCTATACGTGGTCCTCACCGGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAACCCGAAGCGTAAAATGACCATTTTGC
CCCTGAAGCCTCATCAGCGTCGAGACGCCCATCATCAGAGTCGAGACGCTAGCCAAATAAGGAAGCTACTTGGAGATCAAGCTGGCGACAGCGTCGCGACGCTAGGGCAA
TCCGAGAGCAACTTTCCATATTTGAAGGGACAGCGTCGCGACACTAGACATTCTTTGTCTATAAGTTTAGAATGTGGTAAGTCTCTTGAGGATCAAATTTATGAGCTTGC
TAAAAATACTCTTCAGTTTCAGGAAAGTACTCGAGCTGAGTTGAAAGGCATGTATGATAATATTGATAAGATAGAAACACATGTGACAAAACTGGGGAAGCATGTAGAGC
AACAAGCGCAACTGACCCAAGAGATAATCCTTACAACAGAAGTTCCCTTCGTTGCAAAGGTTGATGATGAAGAAATTGAGTGTCCATTGCCATCTCACGATCGATCATGT
GAGGTTAAAGAAGAATCTGAACCAGATTGCAAGGAAACTCTGGTGATAGAGTTTCAGGCTGATGAATCTGAATTTGTTCTTCCCCTTGATCTCCCTTCATCTGATTTATC
TTCTAAGCTGACAACCCTTAGAGTCTTCCTTACTATTCTCCGGGCCAAGAACAACTTGTGGGAGTCTATAAAGATAGGGAATGGGAAGGGAATGCTTGAAGGATCAAGCT
ATAGAGAAGTATGTGAAATGAGAGAGTTTGAGTCAAAATTCCAGCAGCATAACAATAAGGAAATGGCTCTCTTCTTTGATGAATCTGATTCATACTCATTATATAGACAT
CTACCATGCAAGGAGAAGCCTTATGACACAAGACACATGGTGAAATTGCAACTCAAAGTGGATTCTAGTCCCACTGATCCTCTAATGAACAATTGGTTTATGGTCCAACC
AATAAACCGAGTCCCTCTCGGGCCAATGAGAGGGAGGGATCCCTTTGTTCAAGCCCCAGAGTCAGCACTTAACGGAACAACCTCTCTACTATCCCTAATTTGGGTAGGAG
TGAATTCCTTCTCGCACGACTATGTCCCCAGCTATTTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACGGAGCCACTCTCACCTATGCAGATCTA
AGGATAAGCCCGAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCACATGAAATAG
Protein sequenceShow/hide protein sequence
MFIRKHFCREGHVADEIRRPLLKVFFALRDEISLPHDGPKPMHLVTLSIRPRLRRITTSDDFVTSPDVDEFYSDERSHSSSVYRDPSFSKDSDYEPPAHPSTLSSSMTEA
QLQRLRYEYDISEDVHLRVPSPDLIDNNQWPGSIREVTRSCTFPLPSIRGPHRSFGSNSGLKRANPKRKMTILPLKPHQRRDAHHQSRDASQIRKLLGDQAGDSVATLGQ
SESNFPYLKGQRRDTRHSLSISLECGKSLEDQIYELAKNTLQFQESTRAELKGMYDNIDKIETHVTKLGKHVEQQAQLTQEIILTTEVPFVAKVDDEEIECPLPSHDRSC
EVKEESEPDCKETLVIEFQADESEFVLPLDLPSSDLSSKLTTLRVFLTILRAKNNLWESIKIGNGKGMLEGSSYREVCEMREFESKFQQHNNKEMALFFDESDSYSLYRH
LPCKEKPYDTRHMVKLQLKVDSSPTDPLMNNWFMVQPINRVPLGPMRGRDPFVQAPESALNGTTSLLSLIWVGVNSFSHDYVPSYLPVPIPEMGGLLSRRYGATLTYADL
RISPNKQEFIVSSGLRSSYLGHHMK