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Spg024995 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg024995
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-pro-like protein
Genome locationscaffold12:10104677..10107226
RNA-Seq ExpressionSpg024995
SyntenySpg024995
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066013.1 uncharacterized protein E6C27_scaffold32G00020 [Cucumis melo var. makuwa]1.1e-2126.76Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITD-TAGSSTAKKAVPSKKKEGE-------------------------------------
        +F+NTL++ FYD+M G+ASTNFS+I+  GERIEYGIKHGK+ + T      +K   SKKKEGE                                     
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITD-TAGSSTAKKAVPSKKKEGE-------------------------------------

Query:  -------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDL---GVRAYDDSLMCSYHTGAKGHSIDQCP
                                                    ++ PM  LFE LF  GY+  E    D+   G+R Y+ +           +S +   
Subjt:  -------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDL---GVRAYDDSLMCSYHTGAKGHSIDQCP

Query:  HFRLKVQEL----LDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIH-----
          + KV+ +    +     +++Q +  L +    D      RFGLGYK S  D I+ + ++++K L +LE RE    + +IP L+DTF   GI +     
Subjt:  HFRLKVQEL----LDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIH-----

Query:  -------PESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK
                + +  ++ A+ ++       +Y  P DFELNNW +++LP+F  +  K
Subjt:  -------PESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK

XP_022131653.1 uncharacterized protein LOC111004780 [Momordica charantia]5.7e-2639.09Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKK------------------------------------------------
        MFINTLK PFYD+MIGSASTNFS+IMT GE IEYG+KHG+IT T     A K                                                
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKK------------------------------------------------

Query:  ----------AVPSKKKEGESVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQ
                   + SK K G+ +  P+ ELFE L  +GY+ VE    +L  + YD S  C +H GAKGHS++QC  F+ +VQELLDS  LTV++  ++
Subjt:  ----------AVPSKKKEGESVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQ

XP_022131653.1 uncharacterized protein LOC111004780 [Momordica charantia]1.3e-0640.26Show/hide
Query:  RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAII-EQKKEAGPLV
        +FGL YKPS+  +I+    E+ KRL+R E+ E  Y   I+P L+ +F  AGIIH E  + + +A++ E++++ GP V
Subjt:  RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAII-EQKKEAGPLV

XP_022131653.1 uncharacterized protein LOC111004780 [Momordica charantia]1.2e-2332.6Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKEGE-----------SVVTP-MGE-------LFEILFSNGY-
        MFI+TL++P+YD+M+GSASTNFSD++  G+ IE+G+K+G+ITD+  SS  ++ + SKKK+ E            V +P +G+       L ++L S+   
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKEGE-----------SVVTP-MGE-------LFEILFSNGY-

Query:  IGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQ-------KMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQE
        I +  P     ++ YD +  C YH GA GHS + C   + KVQ L+   +L   +           LP Y +   IE+C  F    K   + ++ A    
Subjt:  IGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQ-------KMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQE

Query:  REKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMEL
          K L   +    + ++NII         A      S D +++ I E    + PLVY CP  FELNNW + ++
Subjt:  REKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMEL

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]3.6e-2834.6Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------
        MFINTLK PFYD+M+GSASTNFSDIM  GERIEYG++HG+IT TA     AKK   SKKKEGE                                     
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------

Query:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK
                                                               + TPM ELFEIL  +GY+ VE    +L  + YD+SL C +H GAK
Subjt:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK

Query:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHR
        GH+++QC  FR+ VQELLDS  LTV+       Q   ++++E+ S           D +K  R
Subjt:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHR

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.6e-2837.14Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------
        MFINTLK PFYD+MIGSASTNFSDIMT GERIEYG++H +IT TA     AKKA  SKKKEGE                                     
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------

Query:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK
                                                               + TP  ELFEIL  +GY+ VE    +L  + YD+SL C +H GAK
Subjt:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK

Query:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECS
        GHS++QC  FR+KVQELLDS  LTV+       Q   ++++E+ S
Subjt:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECS

TrEMBL top hitse value%identityAlignment
A0A5D3DUW8 Uncharacterized protein5.1e-2036.07Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITD-TAGSSTAKKAVPSKKKEGE-------------------------------------
        MF+NTL++PFY++MIG+ASTN  DI+  GERIEYGIKHG++ + T      KK   SKKKE E                                     
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITD-TAGSSTAKKAVPSKKKEGE-------------------------------------

Query:  ------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTV
                     +V PM   FE LF  GY+  E    ++    YD+S  C ++    GH + QC  FR KVQ+L+DS  LTV
Subjt:  ------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTV

A0A6J1BU14 uncharacterized protein LOC1110047802.8e-2639.09Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKK------------------------------------------------
        MFINTLK PFYD+MIGSASTNFS+IMT GE IEYG+KHG+IT T     A K                                                
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKK------------------------------------------------

Query:  ----------AVPSKKKEGESVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQ
                   + SK K G+ +  P+ ELFE L  +GY+ VE    +L  + YD S  C +H GAKGHS++QC  F+ +VQELLDS  LTV++  ++
Subjt:  ----------AVPSKKKEGESVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQKMVQ

A0A6J1BU14 uncharacterized protein LOC1110047806.4e-0740.26Show/hide
Query:  RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAII-EQKKEAGPLV
        +FGL YKPS+  +I+    E+ KRL+R E+ E  Y   I+P L+ +F  AGIIH E  + + +A++ E++++ GP V
Subjt:  RFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAII-EQKKEAGPLV

A0A6J1BU14 uncharacterized protein LOC1110047805.8e-2432.6Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKEGE-----------SVVTP-MGE-------LFEILFSNGY-
        MFI+TL++P+YD+M+GSASTNFSD++  G+ IE+G+K+G+ITD+  SS  ++ + SKKK+ E            V +P +G+       L ++L S+   
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKEGE-----------SVVTP-MGE-------LFEILFSNGY-

Query:  IGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQ-------KMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQE
        I +  P     ++ YD +  C YH GA GHS + C   + KVQ L+   +L   +           LP Y +   IE+C  F    K   + ++ A    
Subjt:  IGVERPQLDLGVRAYDDSLMCSYHTGAKGHSIDQCPHFRLKVQELLDSHFLTVSQ-------KMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQE

Query:  REKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMEL
          K L   +    + ++NII         A      S D +++ I E    + PLVY CP  FELNNW + ++
Subjt:  REKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAIIEQKKEAGPLVYLCPEDFELNNWTVMEL

A0A6J1CNY7 Ribonuclease H1.7e-2834.6Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------
        MFINTLK PFYD+M+GSASTNFSDIM  GERIEYG++HG+IT TA     AKK   SKKKEGE                                     
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------

Query:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK
                                                               + TPM ELFEIL  +GY+ VE    +L  + YD+SL C +H GAK
Subjt:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK

Query:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHR
        GH+++QC  FR+ VQELLDS  LTV+       Q   ++++E+ S           D +K  R
Subjt:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHR

A0A6J1DZ90 Ribonuclease H7.8e-2937.14Show/hide
Query:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------
        MFINTLK PFYD+MIGSASTNFSDIMT GERIEYG++H +IT TA     AKKA  SKKKEGE                                     
Subjt:  MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSS-TAKKAVPSKKKEGE-------------------------------------

Query:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK
                                                               + TP  ELFEIL  +GY+ VE    +L  + YD+SL C +H GAK
Subjt:  ------------------------------------------------------SVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAK

Query:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECS
        GHS++QC  FR+KVQELLDS  LTV+       Q   ++++E+ S
Subjt:  GHSIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAACTGGAGAGAGAATCGAGTACGGAATTAA
GCATGGAAAGATAACTGATACGGCTGGATCATCGACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGGGAAAGCGTAGTGACTCCCATGGGAGAACTATTCGAAA
TATTATTCAGTAATGGATACATTGGTGTAGAACGCCCCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCAT
TCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAGCTCCCTCAGTATGGGGAAGTTGA
TATTATAGAAGAATGCTCAAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCC
GTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAGTCATGGCTATAATCGAA
CAGAAGAAAGAAGCTGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTATTAATACTCTCAAATCTCCTTTCTATGATAAGATGATTGGGAGTGCCTCTACCAATTTCTCTGACATAATGACAACTGGAGAGAGAATCGAGTACGGAATTAA
GCATGGAAAGATAACTGATACGGCTGGATCATCGACAGCGAAAAAGGCGGTTCCATCGAAGAAAAAAGAGGGGGAAAGCGTAGTGACTCCCATGGGAGAACTATTCGAAA
TATTATTCAGTAATGGATACATTGGTGTAGAACGCCCCCAATTAGATTTGGGTGTCAGAGCATACGATGACAGTTTGATGTGTTCTTATCACACTGGGGCAAAAGGGCAT
TCTATCGACCAATGTCCTCATTTTCGTCTGAAGGTCCAGGAGTTGTTAGATTCACATTTTTTAACAGTTTCTCAAAAGATGGTTCAGCTCCCTCAGTATGGGGAAGTTGA
TATTATAGAAGAATGCTCAAGGTTTGGTTTGGGATATAAACCAAGCAAAAAAGATATGATTAAAGCACACAGACAGGAGAGAGAAAAACGACTGGCTAGATTGGAGAGCC
GTGAGCCAAAGTATCAAATGAATATCATTCCTCATCTTCATGATACCTTCATCTTTGCTGGAATAATTCATCCGGAATCTCAAGACCCTGCAGTCATGGCTATAATCGAA
CAGAAGAAAGAAGCTGGTCCCTTGGTTTATCTGTGCCCAGAAGACTTTGAACTCAATAATTGGACTGTAATGGAGCTACCATCATTTGTTAATGAGATATCAAAGTAA
Protein sequenceShow/hide protein sequence
MFINTLKSPFYDKMIGSASTNFSDIMTTGERIEYGIKHGKITDTAGSSTAKKAVPSKKKEGESVVTPMGELFEILFSNGYIGVERPQLDLGVRAYDDSLMCSYHTGAKGH
SIDQCPHFRLKVQELLDSHFLTVSQKMVQLPQYGEVDIIEECSRFGLGYKPSKKDMIKAHRQEREKRLARLESREPKYQMNIIPHLHDTFIFAGIIHPESQDPAVMAIIE
QKKEAGPLVYLCPEDFELNNWTVMELPSFVNEISK