; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025003 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025003
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold12:14451693..14460782
RNA-Seq ExpressionSpg025003
SyntenySpg025003
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]3.5e-0635.34Show/hide
Query:  NEETRQKYQEVLKQNVL-MERGF--DGGKKLPHFPLAD--ITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFP
        +E    +Y+E ++   L  E+GF  D  K L   P  +  IT H+W+  CA PE  +A LVREFY N+       V V GV +  S   IN+++ L D P
Subjt:  NEETRQKYQEVLKQNVL-MERGF--DGGKKLPHFPLAD--ITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFP

Query:  NDIFNEILVASSNEQL
         D  +E + A +  +L
Subjt:  NDIFNEILVASSNEQL

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]6.0e-0635.29Show/hide
Query:  RFINEETRQKYQEVLKQNVL-MERGF--DGGKKL--PHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ
        +F +E    +Y+E ++   L  E+GF  D  K L  P F    IT H+W+  CA PE  +  LVREFY N+       V V GV +  S   IN+++ L 
Subjt:  RFINEETRQKYQEVLKQNVL-MERGF--DGGKKL--PHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ

Query:  DFPNDIFNEILVASSNEQL
        D P D  +E + A +  +L
Subjt:  DFPNDIFNEILVASSNEQL

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]2.4e-0733.61Show/hide
Query:  RFINEETRQKYQE-VLKQNVLMERGF--DGGKKLPHFP-LADITN-HSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ
        +F  EE   +Y+E + KQ +  E+GF  +  + +   P +A + N H+W + CA PE  +  LVREFY N+ + +   V V GV + W+   IN++F L 
Subjt:  RFINEETRQKYQE-VLKQNVLMERGF--DGGKKLPHFP-LADITN-HSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ

Query:  DFPNDIFNEILVASSNEQL
        D P D  +E +   + ++L
Subjt:  DFPNDIFNEILVASSNEQL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.3e-0535.64Show/hide
Query:  RFINEETRQKYQEVLKQNVL-MERGFDGGKK----LPHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ
        +F +E    +Y+E +K   L  E+GF          P F    I  H+W+  CA  E  +  LVREFY N+ + +   V V GV + WS   IN+LF L 
Subjt:  RFINEETRQKYQEVLKQNVL-MERGFDGGKK----LPHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ

Query:  D
        D
Subjt:  D

XP_004514776.1 uncharacterized protein LOC101493401 isoform X3 [Cicer arietinum]3.0e-0524.48Show/hide
Query:  FWRFINEETRQKYQEVLK-QNVLMERGFDGGKKLPHFPL-----ADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLF
        F +FIN++T+ K+  ++K +N  +E GF      P + L     + I  H+W+          A +VREFY  I E K   V+V GV + ++P  +N  F
Subjt:  FWRFINEETRQKYQEVLK-QNVLMERGFDGGKKLPHFPL-----ADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLF

Query:  NLQDFPNDIFNEILVASSNEQLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGE-------LGLVSLVRSRYSDLQNLLLEHSFLPSHDCCKSSEDS
        NL         + L  + N+ ++    L+   S   +N   K +       + +KG+       L L ++ +  Y  +   LL +S   S D        
Subjt:  NLQDFPNDIFNEILVASSNEQLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGE-------LGLVSLVRSRYSDLQNLLLEHSFLPSHDCCKSSEDS

Query:  VKGGDYLFNAERTILLRQCVV--LQDAQGKIIVEGLHATTF--KPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTR
                  +  +LL  CVV       GKII + + A  F  K    +    +++ LC+++ V    + E    R+    C L R
Subjt:  VKGGDYLFNAERTILLRQCVV--LQDAQGKIIVEGLHATTF--KPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTR

TrEMBL top hitse value%identityAlignment
A0A1S2Z475 uncharacterized protein LOC101493401 isoform X31.4e-0524.48Show/hide
Query:  FWRFINEETRQKYQEVLK-QNVLMERGFDGGKKLPHFPL-----ADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLF
        F +FIN++T+ K+  ++K +N  +E GF      P + L     + I  H+W+          A +VREFY  I E K   V+V GV + ++P  +N  F
Subjt:  FWRFINEETRQKYQEVLK-QNVLMERGFDGGKKLPHFPL-----ADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLF

Query:  NLQDFPNDIFNEILVASSNEQLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGE-------LGLVSLVRSRYSDLQNLLLEHSFLPSHDCCKSSEDS
        NL         + L  + N+ ++    L+   S   +N   K +       + +KG+       L L ++ +  Y  +   LL +S   S D        
Subjt:  NLQDFPNDIFNEILVASSNEQLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGE-------LGLVSLVRSRYSDLQNLLLEHSFLPSHDCCKSSEDS

Query:  VKGGDYLFNAERTILLRQCVV--LQDAQGKIIVEGLHATTF--KPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTR
                  +  +LL  CVV       GKII + + A  F  K    +    +++ LC+++ V    + E    R+    C L R
Subjt:  VKGGDYLFNAERTILLRQCVV--LQDAQGKIIVEGLHATTF--KPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTR

A0A2P5B0K0 Uncharacterized protein1.7e-0635.34Show/hide
Query:  NEETRQKYQEVLKQNVL-MERGF--DGGKKLPHFPLAD--ITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFP
        +E    +Y+E ++   L  E+GF  D  K L   P  +  IT H+W+  CA PE  +A LVREFY N+       V V GV +  S   IN+++ L D P
Subjt:  NEETRQKYQEVLKQNVL-MERGF--DGGKKLPHFPLAD--ITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFP

Query:  NDIFNEILVASSNEQL
         D  +E + A +  +L
Subjt:  NDIFNEILVASSNEQL

A0A2P5CXV1 Uncharacterized protein2.9e-0635.29Show/hide
Query:  RFINEETRQKYQEVLKQNVL-MERGF--DGGKKL--PHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ
        +F +E    +Y+E ++   L  E+GF  D  K L  P F    IT H+W+  CA PE  +  LVREFY N+       V V GV +  S   IN+++ L 
Subjt:  RFINEETRQKYQEVLKQNVL-MERGF--DGGKKL--PHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ

Query:  DFPNDIFNEILVASSNEQL
        D P D  +E + A +  +L
Subjt:  DFPNDIFNEILVASSNEQL

A0A2P5EK98 Uncharacterized protein (Fragment)1.2e-0733.61Show/hide
Query:  RFINEETRQKYQE-VLKQNVLMERGF--DGGKKLPHFP-LADITN-HSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ
        +F  EE   +Y+E + KQ +  E+GF  +  + +   P +A + N H+W + CA PE  +  LVREFY N+ + +   V V GV + W+   IN++F L 
Subjt:  RFINEETRQKYQE-VLKQNVLMERGF--DGGKKLPHFP-LADITN-HSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ

Query:  DFPNDIFNEILVASSNEQL
        D P D  +E +   + ++L
Subjt:  DFPNDIFNEILVASSNEQL

A0A2P5EYL5 Uncharacterized protein6.5e-0635.64Show/hide
Query:  RFINEETRQKYQEVLKQNVL-MERGFDGGKK----LPHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ
        +F +E    +Y+E +K   L  E+GF          P F    I  H+W+  CA  E  +  LVREFY N+ + +   V V GV + WS   IN+LF L 
Subjt:  RFINEETRQKYQEVLKQNVL-MERGFDGGKK----LPHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQ

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATGAGAATTTCAATCATAACGCATTCTTTGATGACCCTCTGTTTGAGAATGAGCTAATTGATGTAGAATTGCCTGATTTTGAAAATGAATTAGACATGCTTGC
TTTTGAGAATGAAATGTCTGCAATTGATGACTTACCTTCTTTTGAGAATGAATTGGAATTGCCTGAAATTGATAATTTTGAAAATGAAATCGAATTGCCTGATTTGTCTA
AGAATGAGCATGATTTGTCTGATAATGTGCGTAATTTGCATGGAGATGACTACTTGATAGATGATAATTCTGAGTCTAATCATGATAATGCTGAATCTATTGAGTCTGAT
CCAGATGAGTACATAGAATCAGACCCTGAAAGTGTGGATAATGTTGATTCGGGTCCTGATGATGTAGATAGTATAGAATCTGACCCAGAGGAGCTTATATTCTTTAATTC
TTCTGACAGTGAGTCATATGATAGCTTAGTTGAATCATTTTTTAATTCTGAGTCTGGGGAATCTTCTGAGCATATAGATTTTATATCTGATGAATGGACTGGCATGGTTG
ATAGGCCACCTTTAGATCCTAGACCGGTAGATATCATAACGTTTGATGACTCTGTAGAGGAAAAACAAGATGAGGGGATTGAAGTTGAGACTGAGAGAGAACTAAGTGAA
GAAGTTGAGCTTGATGAAAGATTTTGGAGGTTCATTAATGAAGAGACAAGACAAAAATATCAAGAAGTCCTAAAGCAAAATGTTCTAATGGAGCGCGGCTTCGATGGTGG
CAAAAAGCTCCCACATTTTCCTTTAGCGGACATCACTAATCACAGTTGGGAACGGTTGTGCGCAAAGCCGGAGCCCACTGTTGCTGAGCTAGTACGAGAGTTTTACGTCA
ACATTGATGAAAATAAAGGATTCTTGGTTATTGTTCATGGAGTTGCTCTCGACTGGAGCCCTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCCCAATGATATT
TTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTAAATGCCCAGTGGAGGCTCAGAGTCCCAAAGAGTTCCAATAATATAAACTTGTTTGATAAGGGGATTATTGA
CACTGCCAATCTGGCTAGGCTTCAAAAAGGTGAGCTTGGACTAGTTAGCTTAGTTAGATCAAGGTATTCTGATCTCCAGAACCTTTTGCTTGAGCATTCCTTCTTGCCTA
GTCATGACTGCTGCAAAAGTTCTGAGGATTCAGTTAAAGGTGGTGATTATTTGTTCAATGCTGAAAGAACTATTTTGCTGCGACAATGCGTGGTTTTGCAGGATGCTCAG
GGGAAAATCATTGTTGAAGGCCTTCACGCAACAACCTTCAAACCCTGCGGCGCAATGTGTTGCTCGGGTATGGTAACGCAGCTTTGCCTGCAGTCAAGAGTCAACCCTAC
GCCAGAGAAGGAAAGGCAGCCAATCCGCCAGATGTTTGATGGGTGCTGGCTGACGCGCATAAAAGCCAACGTCAATAGTAGAATTATAGCCCCCGCGTCAATGCTAGAAG
AAGCGCTTGCGGCAGAGAACCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATGAGAATTTCAATCATAACGCATTCTTTGATGACCCTCTGTTTGAGAATGAGCTAATTGATGTAGAATTGCCTGATTTTGAAAATGAATTAGACATGCTTGC
TTTTGAGAATGAAATGTCTGCAATTGATGACTTACCTTCTTTTGAGAATGAATTGGAATTGCCTGAAATTGATAATTTTGAAAATGAAATCGAATTGCCTGATTTGTCTA
AGAATGAGCATGATTTGTCTGATAATGTGCGTAATTTGCATGGAGATGACTACTTGATAGATGATAATTCTGAGTCTAATCATGATAATGCTGAATCTATTGAGTCTGAT
CCAGATGAGTACATAGAATCAGACCCTGAAAGTGTGGATAATGTTGATTCGGGTCCTGATGATGTAGATAGTATAGAATCTGACCCAGAGGAGCTTATATTCTTTAATTC
TTCTGACAGTGAGTCATATGATAGCTTAGTTGAATCATTTTTTAATTCTGAGTCTGGGGAATCTTCTGAGCATATAGATTTTATATCTGATGAATGGACTGGCATGGTTG
ATAGGCCACCTTTAGATCCTAGACCGGTAGATATCATAACGTTTGATGACTCTGTAGAGGAAAAACAAGATGAGGGGATTGAAGTTGAGACTGAGAGAGAACTAAGTGAA
GAAGTTGAGCTTGATGAAAGATTTTGGAGGTTCATTAATGAAGAGACAAGACAAAAATATCAAGAAGTCCTAAAGCAAAATGTTCTAATGGAGCGCGGCTTCGATGGTGG
CAAAAAGCTCCCACATTTTCCTTTAGCGGACATCACTAATCACAGTTGGGAACGGTTGTGCGCAAAGCCGGAGCCCACTGTTGCTGAGCTAGTACGAGAGTTTTACGTCA
ACATTGATGAAAATAAAGGATTCTTGGTTATTGTTCATGGAGTTGCTCTCGACTGGAGCCCTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCCCAATGATATT
TTCAATGAAATATTAGTTGCTTCCTCAAACGAGCAACTAAATGCCCAGTGGAGGCTCAGAGTCCCAAAGAGTTCCAATAATATAAACTTGTTTGATAAGGGGATTATTGA
CACTGCCAATCTGGCTAGGCTTCAAAAAGGTGAGCTTGGACTAGTTAGCTTAGTTAGATCAAGGTATTCTGATCTCCAGAACCTTTTGCTTGAGCATTCCTTCTTGCCTA
GTCATGACTGCTGCAAAAGTTCTGAGGATTCAGTTAAAGGTGGTGATTATTTGTTCAATGCTGAAAGAACTATTTTGCTGCGACAATGCGTGGTTTTGCAGGATGCTCAG
GGGAAAATCATTGTTGAAGGCCTTCACGCAACAACCTTCAAACCCTGCGGCGCAATGTGTTGCTCGGGTATGGTAACGCAGCTTTGCCTGCAGTCAAGAGTCAACCCTAC
GCCAGAGAAGGAAAGGCAGCCAATCCGCCAGATGTTTGATGGGTGCTGGCTGACGCGCATAAAAGCCAACGTCAATAGTAGAATTATAGCCCCCGCGTCAATGCTAGAAG
AAGCGCTTGCGGCAGAGAACCCTTAG
Protein sequenceShow/hide protein sequence
MDDENFNHNAFFDDPLFENELIDVELPDFENELDMLAFENEMSAIDDLPSFENELELPEIDNFENEIELPDLSKNEHDLSDNVRNLHGDDYLIDDNSESNHDNAESIESD
PDEYIESDPESVDNVDSGPDDVDSIESDPEELIFFNSSDSESYDSLVESFFNSESGESSEHIDFISDEWTGMVDRPPLDPRPVDIITFDDSVEEKQDEGIEVETERELSE
EVELDERFWRFINEETRQKYQEVLKQNVLMERGFDGGKKLPHFPLADITNHSWERLCAKPEPTVAELVREFYVNIDENKGFLVIVHGVALDWSPGVINSLFNLQDFPNDI
FNEILVASSNEQLNAQWRLRVPKSSNNINLFDKGIIDTANLARLQKGELGLVSLVRSRYSDLQNLLLEHSFLPSHDCCKSSEDSVKGGDYLFNAERTILLRQCVVLQDAQ
GKIIVEGLHATTFKPCGAMCCSGMVTQLCLQSRVNPTPEKERQPIRQMFDGCWLTRIKANVNSRIIAPASMLEEALAAENP