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Spg025009 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025009
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold12:12284471..12287121
RNA-Seq ExpressionSpg025009
SyntenySpg025009
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_027338038.1 uncharacterized protein LOC113851969 [Abrus precatorius]7.8e-0647.62Show/hide
Query:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTM
        F  D  I+    +  +P+ILGRPFLATGR +ID+++ EL++RVQ+EK +   FE  K+ SD M
Subjt:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTM

XP_027338039.1 uncharacterized protein LOC113851970 [Abrus precatorius]8.6e-0547.54Show/hide
Query:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD
        F  D  I+    +  +P+ILGRPFLATGR +ID+++ EL++RVQ EK     FE  K+ SD
Subjt:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD

XP_027344469.1 uncharacterized protein LOC113856881 [Abrus precatorius]1.7e-0550.82Show/hide
Query:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD
        F  D  I+    +  +PIILGRPFLATGR +ID+++ EL++RVQ EK  L  FE  K+ SD
Subjt:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD

XP_027348055.1 uncharacterized protein LOC113859495 [Abrus precatorius]2.3e-0546.03Show/hide
Query:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTM
        F  D  I+    +  +P+ILGRPFLATGR +ID+++ EL++RVQ+EK +   F+  K+ SD M
Subjt:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTM

XP_027351287.1 uncharacterized protein LOC113862397 [Abrus precatorius]2.3e-0546.03Show/hide
Query:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTM
        F  D  I+  + +  +P+ILGRPFLA GR +ID+++ EL++RVQ+EK +   FE  K+ SD M
Subjt:  FSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTM

TrEMBL top hitse value%identityAlignment
A0A1S3XS84 uncharacterized protein LOC1077681479.3e-0544.44Show/hide
Query:  CITVNNEAKFSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFE
        C+   ++  F  D  +M    N  +P+ILGRPFLATGR I+DI+ R+L++RV +E+ V K  E
Subjt:  CITVNNEAKFSNDTWIMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFE

A0A2Z6NIX5 Integrase catalytic domain-containing protein1.6e-0429.49Show/hide
Query:  MPRRQRRPPPVTRDTHGGSLVVVRIRWSCLCHERRRIELVGL-CINQVSSCTNRETLIMYGLSYEMLDYVCSGVIEHPDYVHLSECITVNNEAKFSNDTW
        +P++++ P   T     G+L +    W  LC+ R  I L+ L  + ++     + T +   L+   + Y     I H   V + E I       F  D  
Subjt:  MPRRQRRPPPVTRDTHGGSLVVVRIRWSCLCHERRRIELVGL-CINQVSSCTNRETLIMYGLSYEMLDYVCSGVIEHPDYVHLSECITVNNEAKFSNDTW

Query:  IM-VGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD
        IM +        ++LGRPFLATGR +ID+E  EL++R+ +EK +   FE  K   D
Subjt:  IM-VGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD

A0A392N252 Uncharacterized protein (Fragment)9.3e-0527.56Show/hide
Query:  MPRRQRRPPPVTRDTHGGSLVVVRIRWSCLCHERRRIELVGL-CINQVSSCTNRETLIMYGLSYEMLDYVCSGVIEHPDYVHLSECITVNNEAKFSNDTW
        +P++Q+ P   T     G+L + R     LC     + L+ L  +  +     + T +   L+   + +          Y  L + +    +  F  D  
Subjt:  MPRRQRRPPPVTRDTHGGSLVVVRIRWSCLCHERRRIELVGL-CINQVSSCTNRETLIMYGLSYEMLDYVCSGVIEHPDYVHLSECITVNNEAKFSNDTW

Query:  IMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDT
        I+    N  +P++LGRPFLATGR +ID+ER EL++R+ +E+   K FE  K+   T
Subjt:  IMVGRYNPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDT

A0A445CFS8 Uncharacterized protein4.6e-0453.06Show/hide
Query:  NPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD
        NP  PIILGRPFLAT R +ID+ER EL++R+  E+     F+ P   SD
Subjt:  NPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSD

A0A6L2J978 Reverse transcriptase domain-containing protein3.5e-0433.72Show/hide
Query:  DYVHLSECITVNNEAKFSNDTWIMVGRY-------------NPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPK
        D+  L EC+ + + A  + D ++ VG++             +P +P+ILGRPFL TGR +ID+   EL +RV  E    K  +  K
Subjt:  DYVHLSECITVNNEAKFSNDTWIMVGRY-------------NPAMPIILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGACGCCAGCGCCGCCCTCCTCCGGTGACGCGCGATACCCACGGCGGCAGCCTCGTTGTTGTTCGAATTAGATGGAGTTGCTTGTGTCATGAGCGACGTCGCAT
TGAATTAGTTGGTTTGTGCATAAATCAAGTATCTTCTTGCACTAATCGGGAGACATTGATCATGTATGGTTTGAGTTATGAGATGTTGGATTATGTGTGTTCTGGTGTTA
TTGAACATCCCGATTATGTGCATTTGTCTGAATGCATTACAGTTAATAACGAGGCTAAGTTTAGTAATGACACTTGGATTATGGTGGGTCGTTACAATCCTGCTATGCCT
ATTATATTAGGGAGACCATTCCTTGCTACAGGGAGGGTTATAATTGATATTGAACGCAGGGAGCTAATCATCAGAGTCCAACAGGAGAAGAAGGTCTTAAAAGCTTTTGA
GGACCCTAAGAACACATCAGATACCATGTTGGTGGGCTATAGGAGAGGTGCTAGGAAGAGCACCAATGATGGAACATCTGACAGGAGACCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACGACGCCAGCGCCGCCCTCCTCCGGTGACGCGCGATACCCACGGCGGCAGCCTCGTTGTTGTTCGAATTAGATGGAGTTGCTTGTGTCATGAGCGACGTCGCAT
TGAATTAGTTGGTTTGTGCATAAATCAAGTATCTTCTTGCACTAATCGGGAGACATTGATCATGTATGGTTTGAGTTATGAGATGTTGGATTATGTGTGTTCTGGTGTTA
TTGAACATCCCGATTATGTGCATTTGTCTGAATGCATTACAGTTAATAACGAGGCTAAGTTTAGTAATGACACTTGGATTATGGTGGGTCGTTACAATCCTGCTATGCCT
ATTATATTAGGGAGACCATTCCTTGCTACAGGGAGGGTTATAATTGATATTGAACGCAGGGAGCTAATCATCAGAGTCCAACAGGAGAAGAAGGTCTTAAAAGCTTTTGA
GGACCCTAAGAACACATCAGATACCATGTTGGTGGGCTATAGGAGAGGTGCTAGGAAGAGCACCAATGATGGAACATCTGACAGGAGACCACCTTGA
Protein sequenceShow/hide protein sequence
MPRRQRRPPPVTRDTHGGSLVVVRIRWSCLCHERRRIELVGLCINQVSSCTNRETLIMYGLSYEMLDYVCSGVIEHPDYVHLSECITVNNEAKFSNDTWIMVGRYNPAMP
IILGRPFLATGRVIIDIERRELIIRVQQEKKVLKAFEDPKNTSDTMLVGYRRGARKSTNDGTSDRRPP