CuGenDBv2

Gene ID	Spg025038
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	FAD/NAD(P)-binding oxidoreductase family protein
Genome location	scaffold12:7985680..7987951
RNA-Seq Expression	Spg025038
Synteny	Spg025038
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010308.1 hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma]

1.8e-33

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK
        QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG +SSN SR S GKRKPE+ VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+  KGRRKGGK
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK

Query:  KKNKSKKNGGGGEKRH
        KKN      GGG+KRH
Subjt:  KKNKSKKNGGGGEKRH

XP_022152964.1 uncharacterized protein LOC111020577 [Momordica charantia]

1.1e-33

73.98

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVVVK
        QKKQ+LPLSVARPIMKKQKEREQKM++E LNLG   G   +NSRRS GKRKPED VL+ SEGIFR GVLDVKHLLHRAPT        RN+D GN++V K
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVVVK

Query:  GRRKGGKKKNKSKKNGGGGEKRH
        GRRKGGKKKNKSKK  GGG+KRH
Subjt:  GRRKGGKKKNKSKKNGGGGEKRH

XP_022944773.1 uncharacterized protein LOC111449125 [Cucurbita moschata]

1.8e-33

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK
        QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG +SSN SR S GKRKPE+ VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+  KGRRKGGK
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK

Query:  KKNKSKKNGGGGEKRH
        KKN      GGG+KRH
Subjt:  KKNKSKKNGGGGEKRH

XP_022985670.1 uncharacterized protein LOC111483659 [Cucurbita maxima]

5.3e-33

74.14

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK
        QKKQRLPLSVARPI+KKQKEREQKMVQE  N+  FGG++SSN SR S GKRKPE  VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+  KGRRKGGK
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK

Query:  KKNKSKKNGGGGEKRH
        KKN      GGG+KRH
Subjt:  KKNKSKKNGGGGEKRH

XP_023511857.1 uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo]

4.0e-33

74.14

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK
        QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG++SSN SR S GKRKPE+ VLKSSEG F+ GVLDV HLL  AP+RNSD GNE+  KGRRKGGK
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK

Query:  KKNKSKKNGGGGEKRH
        KKN      GGG+KRH
Subjt:  KKNKSKKNGGGGEKRH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BNE0 uncharacterized protein LOC103491457

9.1e-31

67.19

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGI-SSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGN
        QKKQRLPLSVARPIMKKQKEREQKMVQE  ++  FGG+ SSSNSR+SSGKR+PE+ VLKSSEG F+ GVLDVKHLL  +            P RN+D GN
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGI-SSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGN

Query:  EVVVKGRRKGGKKKNKSKKNGGGGEKRH
        E+  KGRRKGGKKKN   K  GGG+KRH
Subjt:  EVVVKGRRKGGKKKNKSKKNGGGGEKRH

A0A5A7V3A9 Uncharacterized protein

1.1e-31

67.97

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGI-SSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGN
        QKKQRLPLSVARPIMKKQKEREQKMVQE  ++G FGG+ SSSNSR+SSGKR+PE+ VLKSSEG F+ GVLDVKHLL  +            P RN+D GN
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGI-SSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGN

Query:  EVVVKGRRKGGKKKNKSKKNGGGGEKRH
        E+  KGRRKGGKKKN   K  GGG+KRH
Subjt:  EVVVKGRRKGGKKKNKSKKNGGGGEKRH

A0A6J1DHM3 uncharacterized protein LOC111020577

5.1e-34

73.98

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVVVK
        QKKQ+LPLSVARPIMKKQKEREQKM++E LNLG   G   +NSRRS GKRKPED VL+ SEGIFR GVLDVKHLLHRAPT        RN+D GN++V K
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVVVK

Query:  GRRKGGKKKNKSKKNGGGGEKRH
        GRRKGGKKKNKSKK  GGG+KRH
Subjt:  GRRKGGKKKNKSKKNGGGGEKRH

A0A6J1FZ06 uncharacterized protein LOC111449125

8.8e-34

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK
        QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG +SSN SR S GKRKPE+ VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+  KGRRKGGK
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK

Query:  KKNKSKKNGGGGEKRH
        KKN      GGG+KRH
Subjt:  KKNKSKKNGGGGEKRH

A0A6J1JBZ2 uncharacterized protein LOC111483659

2.5e-33

74.14

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Query:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK
        QKKQRLPLSVARPI+KKQKEREQKMVQE  N+  FGG++SSN SR S GKRKPE  VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+  KGRRKGGK
Subjt:  QKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSN-SRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGK

Query:  KKNKSKKNGGGGEKRH
        KKN      GGG+KRH
Subjt:  KKNKSKKNGGGGEKRH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G44820.1 unknown protein

5.3e-23

48.51

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Query:  QAQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD--------------
        +AQK  RLPLSVAR  MKKQK+RE+KM+++++ LG FGG  SS+ + +  KR PE+ VLKS+ GIF+ GVLDVKHLL   P+ +SD              
Subjt:  QAQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD--------------

Query:  -----SGNEVVVKGRRKGGKKKNKSKKNGGGGEK
              G  +  KG++KGGK KNK KK GGG ++
Subjt:  -----SGNEVVVKGRRKGGKKKNKSKKNGGGGEK

AT2G44820.2 unknown protein

5.3e-23

48.51

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Query:  QAQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD--------------
        +AQK  RLPLSVAR  MKKQK+RE+KM+++++ LG FGG  SS+ + +  KR PE+ VLKS+ GIF+ GVLDVKHLL   P+ +SD              
Subjt:  QAQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD--------------

Query:  -----SGNEVVVKGRRKGGKKKNKSKKNGGGGEK
              G  +  KG++KGGK KNK KK GGG ++
Subjt:  -----SGNEVVVKGRRKGGKKKNKSKKNGGGGEK

Sequences

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CDS sequence

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ATGAAGCCTTTGGATTCTTCTTCCGTCCAAAGAGGGCTGAGAAGTAAGCGGCAGCCTTTATATTGCGAGGGTTTAGGGTTTGAAGGGTTTGAACTTACATCTATTGCATT
TAGAGCATCAATCTTGTTTCCCGCTGTGCAGGCTCAAAAGAAGCAAAGACTGCCTCTAAGTGTAGCACGACCAATTATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGG
TACAAGAGAGTTTGAATCTTGGACTATTTGGAGGGATTTCGAGTAGCAATTCTAGAAGATCCTCAGGTAAGCGCAAGCCTGAGGACCATGTTCTCAAGTCAAGCGAAGGC
ATTTTTAGGAAAGGAGTGCTTGATGTCAAGCATCTACTACACCGAGCTCCTACTAGGAATAGTGACTCTGGAAACGAAGTTGTCGTTAAGGGTAGAAGGAAGGGAGGTAA
AAAGAAGAATAAAAGTAAGAAAAATGGTGGTGGCGGCGAGAAACGCCATTGA

mRNA sequence

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Protein sequence

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MKPLDSSSVQRGLRSKRQPLYCEGLGFEGFELTSIAFRASILFPAVQAQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGISSSNSRRSSGKRKPEDHVLKSSEG
IFRKGVLDVKHLLHRAPTRNSDSGNEVVVKGRRKGGKKKNKSKKNGGGGEKRH

Spg025038 (gene) of Sponge gourd (cylindrica) v1 genome