; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025048 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025048
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:8489084..8493744
RNA-Seq ExpressionSpg025048
SyntenySpg025048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4291403.1 unnamed protein product [Prunus armeniaca]8.9e-1223.36Show/hide
Query:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA------------------------------------------RLENSNTASRLDIYLSKRMWKSI
        K+ GG+ FRDL  FN A+LAK GWRIL +P SL+A                                          R+ +  T           +WKS+
Subjt:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA------------------------------------------RLENSNTASRLDIYLSKRMWKSI

Query:  WNLECWPKVNDIKKRGINTNLS-----------CLGP--------------------VWDWW---------------NFKEYWEGAKKSMNKEEAGRVG-
        W+++  PK+     RG +  L+           C G                        +W               +F   W+    ++N  E      
Subjt:  WNLECWPKVNDIKKRGINTNLS-----------CLGP--------------------VWDWW---------------NFKEYWEGAKKSMNKEEAGRVG-

Query:  ----HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHG--CWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLI
              +W  W+ RN       + +P +    L+ ++ +F+     L   P + + S     W  P  G  K+N DAAW      GGVGW+IRDS G L+
Subjt:  ----HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHG--CWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLI

Query:  ETGNSKTCIKEEIKLMEARAI
          G           +ME  AI
Subjt:  ETGNSKTCIKEEIKLMEARAI

XP_021818901.1 uncharacterized protein LOC110760860 [Prunus avium]5.2e-1226.3Show/hide
Query:  QDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYL------SKRMWKSI------------WN----------LECW-P
        Q +CM KE GGM FRDL  FN AMLAK GWRI+K P+SL+A           D         S   WK I            W           L+ W P
Subjt:  QDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYL------SKRMWKSI------------WN----------LECW-P

Query:  KVNDIK-----------KRGINTN-------------LSCLG-------PVWDW-------WN------------------FKEYWEGA----KKSMNKE
        K +  K            +G+  N              SC+        P+  W       W+                  F E WE      +K++N +
Subjt:  KVNDIK-----------KRGINTN-------------LSCLG-------PVWDW-------WN------------------FKEYWEGA----KKSMNKE

Query:  EAGRVGHL-IWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQ-------FNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWII
        E  +V    +W  W+ RN         +P  + R L  ++++++          N L R   +       W+ P  G  K N D AW   +  GG GW+I
Subjt:  EAGRVGHL-IWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQ-------FNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWII

Query:  RDSIGSLI
        RD+ G L+
Subjt:  RDSIGSLI

XP_030495130.1 uncharacterized protein LOC115710918 [Cannabis sativa]3.6e-1325.08Show/hide
Query:  KRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLS------KRMWKSIWNLECWPKVND
        K NS +G+    G +      +   KE+GGM FR L  FN AMLAK GW++L  P+SL  R+  +      D   S        +W+SIW  +   ++  
Subjt:  KRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLS------KRMWKSIWNLECWPKVND

Query:  IKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKE-------------EAGRVGHLI---------------------------------------WAT
         +  G  T+   LG  W      +Y       ++               +AG V  L                                        WA 
Subjt:  IKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKE-------------EAGRVGHLI---------------------------------------WAT

Query:  WQLRNQIKQSNFKMNPKQLFRELMIKMEQF---QNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTC
        W+ RN++  +  K   K++     I  E +   QN+   L+ S + + +    W PP   + K+N+DAA +   NS G G + RD +G  +E   +KTC
Subjt:  WQLRNQIKQSNFKMNPKQLFRELMIKMEQF---QNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTC

XP_030928675.1 uncharacterized protein LOC115954851 [Quercus lobata]5.2e-1225.7Show/hide
Query:  VCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSN---TASRLDIYLSKR---MWKS------------IW------NLECW-------P
        +C SK  GGMDFRD+  FN A+L K  WR++   ++L+ ++ ++      S +D  + ++    W+S            IW       ++ W       P
Subjt:  VCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSN---TASRLDIYLSKR---MWKS------------IW------NLECW-------P

Query:  KVNDIKKRGINTNLSCLGP-------VWDWWNFKEY---WEGAKKS-----------MNKEEAGRVG---HLIWATWQLRNQIKQSNFKMNPKQLFRELM
          N I      +++S +         +WD    +E    WE   K            M K    RV       W+ WQ RN++++     N  +L  +  
Subjt:  KVNDIKKRGINTNLSCLGP-------VWDWWNFKEY---WEGAKKS-----------MNKEEAGRVG---HLIWATWQLRNQIKQSNFKMNPKQLFRELM

Query:  IKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARA
          +  F N  NY   S   + ++   W PP +  +K N DAA+FD+S   GVG +  D  G +I   + K  + + ++L+EA A
Subjt:  IKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARA

XP_039791740.1 uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum]1.5e-1128.64Show/hide
Query:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIY------LSKRMWKSI--------WNLE----CWPKVNDIKKRGINTNLSCL
        K  GGM FRD+ +FN+AML K  WRIL  P SL AR+           +       S   W+SI        WN E    C+   N+     I     C 
Subjt:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIY------LSKRMWKSI--------WNLE----CWPKVNDIKKRGINTNLSCL

Query:  GPVWDWWNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDA
         P  D   F  +     ++    EA      +W  W+ RN ++     M+P+ + +  +  +E F            ++  S   W PP  G   +N+DA
Subjt:  GPVWDWWNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDA

Query:  AWFDSSNSGGVGWIIRDSIG
        A F + +  GVG +IRD  G
Subjt:  AWFDSSNSGGVGWIIRDSIG

TrEMBL top hitse value%identityAlignment
A0A6J5VSP2 Uncharacterized protein4.3e-1223.36Show/hide
Query:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA------------------------------------------RLENSNTASRLDIYLSKRMWKSI
        K+ GG+ FRDL  FN A+LAK GWRIL +P SL+A                                          R+ +  T           +WKS+
Subjt:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMA------------------------------------------RLENSNTASRLDIYLSKRMWKSI

Query:  WNLECWPKVNDIKKRGINTNLS-----------CLGP--------------------VWDWW---------------NFKEYWEGAKKSMNKEEAGRVG-
        W+++  PK+     RG +  L+           C G                        +W               +F   W+    ++N  E      
Subjt:  WNLECWPKVNDIKKRGINTNLS-----------CLGP--------------------VWDWW---------------NFKEYWEGAKKSMNKEEAGRVG-

Query:  ----HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHG--CWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLI
              +W  W+ RN       + +P +    L+ ++ +F+     L   P + + S     W  P  G  K+N DAAW      GGVGW+IRDS G L+
Subjt:  ----HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHG--CWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLI

Query:  ETGNSKTCIKEEIKLMEARAI
          G           +ME  AI
Subjt:  ETGNSKTCIKEEIKLMEARAI

A0A6P5SYW2 uncharacterized protein LOC1107608602.5e-1226.3Show/hide
Query:  QDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYL------SKRMWKSI------------WN----------LECW-P
        Q +CM KE GGM FRDL  FN AMLAK GWRI+K P+SL+A           D         S   WK I            W           L+ W P
Subjt:  QDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYL------SKRMWKSI------------WN----------LECW-P

Query:  KVNDIK-----------KRGINTN-------------LSCLG-------PVWDW-------WN------------------FKEYWEGA----KKSMNKE
        K +  K            +G+  N              SC+        P+  W       W+                  F E WE      +K++N +
Subjt:  KVNDIK-----------KRGINTN-------------LSCLG-------PVWDW-------WN------------------FKEYWEGA----KKSMNKE

Query:  EAGRVGHL-IWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQ-------FNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWII
        E  +V    +W  W+ RN         +P  + R L  ++++++          N L R   +       W+ P  G  K N D AW   +  GG GW+I
Subjt:  EAGRVGHL-IWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQNQ-------FNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWII

Query:  RDSIGSLI
        RD+ G L+
Subjt:  RDSIGSLI

A0A803P5I6 Uncharacterized protein1.7e-1325.08Show/hide
Query:  KRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLS------KRMWKSIWNLECWPKVND
        K NS +G+    G +      +   KE+GGM FR L  FN AMLAK GW++L  P+SL  R+  +      D   S        +W+SIW  +   ++  
Subjt:  KRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLS------KRMWKSIWNLECWPKVND

Query:  IKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKE-------------EAGRVGHLI---------------------------------------WAT
         +  G  T+   LG  W      +Y       ++               +AG V  L                                        WA 
Subjt:  IKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKE-------------EAGRVGHLI---------------------------------------WAT

Query:  WQLRNQIKQSNFKMNPKQLFRELMIKMEQF---QNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTC
        W+ RN++  +  K   K++     I  E +   QN+   L+ S + + +    W PP   + K+N+DAA +   NS G G + RD +G  +E   +KTC
Subjt:  WQLRNQIKQSNFKMNPKQLFRELMIKMEQF---QNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTC

A0A803PZ52 Uncharacterized protein9.6e-1225.88Show/hide
Query:  DVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKRMWKS---IWNLECWPKVNDIKKRGINTNLSCLGPVWDW----
        ++C SK  GG+ FR L   N+AM+AK  WR+L +P S +A +  +        Y   R+  S    W+   W +  D+  +  +  L C      W    
Subjt:  DVCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKRMWKS---IWNLECWPKVNDIKKRGINTNLSCLGPVWDW----

Query:  ----------WNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQ-NQFNYLSRSPAKTLQSHGCWLPPIDGHWK
                   + KE+       +NKE+   +   +WA W LRN+   +N  M+   +   +   +  +   Q N    SP++ L  HG       G+++
Subjt:  ----------WNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNFKMNPKQLFRELMIKMEQFQ-NQFNYLSRSPAKTLQSHGCWLPPIDGHWK

Query:  MNMDAAWFDSSNSGGVGWIIRDSIGSLI
        +N DAA   S    G G +I D  G ++
Subjt:  MNMDAAWFDSSNSGGVGWIIRDSIGSLI

A2YY55 Uncharacterized protein1.3e-1124.73Show/hide
Query:  VCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKR------MWKS------------IW------NLECWPKV-----
        +C  KEQGG+ +RDL LFN AMLA+ GWR++ +P SL A++  +      D+   +        W+S            IW      N++ W        
Subjt:  VCMSKEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENSNTASRLDIYLSKR------MWKS------------IW------NLECWPKV-----

Query:  ---NDIKKRG---INTNLSCLGPVWDWWNFKE-----YWEGAKKSM------NKEEAGRVG------HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKM
             I  RG   +N     + P    W+ KE     +WE   K +         E G+V       HL+W  W  RN+      K++  ++   +    
Subjt:  ---NDIKKRG---INTNLSCLGPVWDWWNFKE-----YWEGAKKSM------NKEEAGRVG------HLIWATWQLRNQIKQSNFKMNPKQLFRELMIKM

Query:  EQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAIL
           +N   +       +++    W  P  G  K+N D A+ + S  G  G++IR   G  +  G+ +  +  +  + EA A L
Subjt:  EQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAIL

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.4e-0451.06Show/hide
Query:  QDVCMSKE-QGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS
        Q +C SKE  GG+ FRDL  FN+A+LAK  +RI+  P +L++RL  S
Subjt:  QDVCMSKE-QGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-0542.19Show/hide
Query:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS---NTASRLDIYLSKR---MWKSI
        K +GG+ F+D+  FN A+L K  WR+L  PESLMA++  S   + +  L+  L  R   +WKSI
Subjt:  KEQGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS---NTASRLDIYLSKR---MWKSI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.0e-0551.06Show/hide
Query:  QDVCMSKE-QGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS
        Q +C SKE  GG+ FRDL  FN+A+LAK  +RI+  P +L++RL  S
Subjt:  QDVCMSKE-QGGMDFRDLALFNKAMLAKPGWRILKDPESLMARLENS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGG
GGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCA
AAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTA
GCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAA
GTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGGACTGGTGGAACTTTAAGG
AATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTC
AAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGG
GTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTT
CTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGAT
TACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGT
CTGGCAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGCTGACCGACCGATCGGTCGGTTCGGTTGGTTTTTTAATATTATTCTGGTGAAGGAGGCAACGAAGAACTTAGAACAGAGAAGAGAGTGCGATGCTGAAGGAGG
GGAGACGACAACGACGATGCTGAAGGAGGCGAGACGAGGGCGACCTTATCCTACAAAACTGGAAAGGAAAGCTTATTTCTGCAGGAGGAAAAGAAATTCTCATCAAGGCA
AAACTGGAAAGGAAGGCTCACTGGGCCAGCCGGGGCAAGATGTGTGTATGAGTAAAGAGCAAGGGGGAATGGATTTCAGAGACCTCGCCTTATTTAACAAAGCTATGCTA
GCCAAACCAGGTTGGAGAATCCTAAAAGACCCCGAGAGCCTCATGGCTCGGCTGGAGAACTCTAATACAGCTTCGAGATTGGATATATATCTTTCCAAAAGGATGTGGAA
GTCTATTTGGAATCTTGAGTGCTGGCCAAAAGTGAACGATATTAAGAAGAGGGGAATTAACACTAATTTGAGTTGTTTGGGACCCGTTTGGGACTGGTGGAACTTTAAGG
AATACTGGGAAGGAGCTAAAAAGAGCATGAACAAAGAAGAGGCGGGGAGAGTTGGCCATCTAATTTGGGCGACTTGGCAATTAAGAAATCAGATCAAGCAATCAAATTTC
AAGATGAACCCAAAACAACTTTTCAGAGAGTTAATGATCAAAATGGAGCAGTTTCAAAACCAATTCAATTACCTGTCGAGAAGTCCAGCGAAGACCCTTCAGAGTCACGG
GTGTTGGCTGCCGCCGATTGATGGTCATTGGAAGATGAACATGGACGCTGCATGGTTCGACTCCTCTAATTCGGGGGGAGTGGGATGGATCATTCGTGACTCCATAGGTT
CTTTGATCGAGACGGGAAACTCGAAGACATGCATAAAAGAGGAAATCAAATTGATGGAGGCTAGAGCCATTCTTGAATGGATTAAGAAACTCACTGAGAAAATTAAAGAT
TACCCGGATTTGATAGTCCCTCCGTTGCTGGTGGAGCCGGACGCTGCCGGGGAGTGCAAGACAACTTGGAAATCACGCTGGCGATCGATGAAATTGAAAGCTTGGCGAGT
CTGGCAAATGTGA
Protein sequenceShow/hide protein sequence
MPADRPIGRFGWFFNIILVKEATKNLEQRRECDAEGGETTTTMLKEARRGRPYPTKLERKAYFCRRKRNSHQGKTGKEGSLGQPGQDVCMSKEQGGMDFRDLALFNKAML
AKPGWRILKDPESLMARLENSNTASRLDIYLSKRMWKSIWNLECWPKVNDIKKRGINTNLSCLGPVWDWWNFKEYWEGAKKSMNKEEAGRVGHLIWATWQLRNQIKQSNF
KMNPKQLFRELMIKMEQFQNQFNYLSRSPAKTLQSHGCWLPPIDGHWKMNMDAAWFDSSNSGGVGWIIRDSIGSLIETGNSKTCIKEEIKLMEARAILEWIKKLTEKIKD
YPDLIVPPLLVEPDAAGECKTTWKSRWRSMKLKAWRVWQM