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Spg025062 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025062
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box and associated interaction domains-containing protein
Genome locationscaffold12:10400729..10402716
RNA-Seq ExpressionSpg025062
SyntenySpg025062
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21408.1 hypothetical protein TSUD_32380 [Trifolium subterraneum]2.6e-0881.08Show/hide
Query:  RVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRA
        RVAAS + +VRCVWKLGI+NGFEYH DRLF DLFYRA
Subjt:  RVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRA

GEX44295.1 reverse transcriptase domain-containing protein [Tanacetum cinerariifolium]4.5e-0843.69Show/hide
Query:  VSGAPEWTRKKGDFSEQPNPPRFQTQESTFSYEHS--------------------------------------------DENEFGNPGHTHPGASTLLWG
        V   PEWTRKKG F E    PRFQTQESTF YEHS                                            DENEFGNP HTHPGA  LLWG
Subjt:  VSGAPEWTRKKGDFSEQPNPPRFQTQESTFSYEHS--------------------------------------------DENEFGNPGHTHPGASTLLWG

Query:  GVF
        G F
Subjt:  GVF

KAF3592190.1 hypothetical protein DY000_02021681 [Brassica cretica]3.7e-1873.33Show/hide
Query:  RVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRANYCVSGAPEWTRKKGDFSEQPNPPRFQTQESTFSYEHS
        RVAA T+ E+RCV KLGIVNGFEYHSDRLFHDLFYR   CV G P   R++ DFSEQP+  RFQTQESTF YEHS
Subjt:  RVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRANYCVSGAPEWTRKKGDFSEQPNPPRFQTQESTFSYEHS

RDY14781.1 hypothetical protein CR513_00081, partial [Mucuna pruriens]1.0e-0756.34Show/hide
Query:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLVWQGRVAASTRVE-------VRCVWKLGIVNGF
        ++KAAQRRLEGLLRKA RADE GK KGVFW PL R   VW G  A  T  E       +  V +LGIV+ F
Subjt:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLVWQGRVAASTRVE-------VRCVWKLGIVNGF

XP_021685654.1 LOW QUALITY PROTEIN: uncharacterized protein LOC110668632 [Hevea brasiliensis]1.3e-0767.39Show/hide
Query:  RFQTQESTFSYEHS----DENEFGNPGHTHPGASTLLWGGVFISRE
        R Q +E  FS++HS    DENE GNPGHTHPGAS LLWGG+FI RE
Subjt:  RFQTQESTFSYEHS----DENEFGNPGHTHPGASTLLWGGVFISRE

TrEMBL top hitse value%identityAlignment
A0A2Z6LUB0 Fe2OG dioxygenase domain-containing protein1.3e-0881.08Show/hide
Query:  RVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRA
        RVAAS + +VRCVWKLGI+NGFEYH DRLF DLFYRA
Subjt:  RVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRA

A0A371II96 Uncharacterized protein (Fragment)4.9e-0856.34Show/hide
Query:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLVWQGRVAASTRVE-------VRCVWKLGIVNGF
        ++KAAQRRLEGLLRKA RADE GK KGVFW PL R   VW G  A  T  E       +  V +LGIV+ F
Subjt:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLVWQGRVAASTRVE-------VRCVWKLGIVNGF

A0A5A7Q1Q1 F-box and associated interaction domains-containing protein1.2e-0682.05Show/hide
Query:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLV
        MRKA QRRLEGLLRKA RADE GK KG+FW PLSR VLV
Subjt:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLV

A0A5K0ZJQ1 Uncharacterized protein (Fragment)6.0e-0685.71Show/hide
Query:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSR
        MRKAAQRRLEGLLRKA RADE GK KGVFW PL R
Subjt:  MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSR

A0A5N5IX32 Uncharacterized protein1.7e-0589.29Show/hide
Query:  DENEFGNPGHTHPGASTLLWGGVFISRE
        DENE GNPGHTHPGAS LLWGGVFI RE
Subjt:  DENEFGNPGHTHPGASTLLWGGVFISRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGACAAGGGCCGATGAATGGGGGAAAATGAAAGGCGTTTTCTGGCCCCCTCTGAGCCGAGTGGT
GCTTGTGTGGCAGGGCCGAGTGGCGGCCTCGACTCGAGTGGAAGTGCGATGTGTCTGGAAACTCGGGATCGTAAATGGATTCGAGTACCATTCTGATCGCCTCTTTCATG
ATCTTTTCTATAGGGCGAACTACTGTGTGTCCGGTGCCCCTGAGTGGACAAGAAAGAAAGGAGATTTCTCGGAGCAACCCAACCCCCCAAGGTTTCAGACCCAGGAGTCA
ACTTTCTCGTATGAGCATTCGGACGAGAATGAATTCGGGAATCCAGGACATACTCATCCTGGAGCTTCTACTCTTCTCTGGGGAGGAGTTTTTATATCTCGAGAGCAGGA
AAAGAAAGAAGAGGAATTGGATGCCCTAGAGCAGCAACCCCCGGATAAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGACAAGGGCCGATGAATGGGGGAAAATGAAAGGCGTTTTCTGGCCCCCTCTGAGCCGAGTGGT
GCTTGTGTGGCAGGGCCGAGTGGCGGCCTCGACTCGAGTGGAAGTGCGATGTGTCTGGAAACTCGGGATCGTAAATGGATTCGAGTACCATTCTGATCGCCTCTTTCATG
ATCTTTTCTATAGGGCGAACTACTGTGTGTCCGGTGCCCCTGAGTGGACAAGAAAGAAAGGAGATTTCTCGGAGCAACCCAACCCCCCAAGGTTTCAGACCCAGGAGTCA
ACTTTCTCGTATGAGCATTCGGACGAGAATGAATTCGGGAATCCAGGACATACTCATCCTGGAGCTTCTACTCTTCTCTGGGGAGGAGTTTTTATATCTCGAGAGCAGGA
AAAGAAAGAAGAGGAATTGGATGCCCTAGAGCAGCAACCCCCGGATAAGCCTTAA
Protein sequenceShow/hide protein sequence
MRKAAQRRLEGLLRKATRADEWGKMKGVFWPPLSRVVLVWQGRVAASTRVEVRCVWKLGIVNGFEYHSDRLFHDLFYRANYCVSGAPEWTRKKGDFSEQPNPPRFQTQES
TFSYEHSDENEFGNPGHTHPGASTLLWGGVFISREQEKKEEELDALEQQPPDKP