; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025070 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025070
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold12:14695189..14698545
RNA-Seq ExpressionSpg025070
SyntenySpg025070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]6.5e-1563.33Show/hide
Query:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP
        T   S    +  SSS++ PSP+S DQYAM+LGFT VTR  +RS GI  GS  ESST PPRPSTNL+RPSSGVVQMR P SPSS   SS P
Subjt:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]1.8e-1766.67Show/hide
Query:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP
        T   S    + SSSS++TPSPMS DQYAM+LGFT VTRS++RS  I+ GS  ESST PP+PSTNL+RPS GVVQMRSPVSPSS   SS P
Subjt:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]1.4e-1465.12Show/hide
Query:  SKGK-SSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIPS
        SKG  +SSSS++ PSP   DQYAME+GFT VTRS++RS  I+ GS  ES+T PPRPS NL+ PSSGVVQMR P SPSS   SS PS
Subjt:  SKGK-SSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIPS

TYK14869.1 hypothetical protein E5676_scaffold1432G00040 [Cucumis melo var. makuwa]1.9e-1463.33Show/hide
Query:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP
        T   S    + SSSS++TPSP S DQ AM+LGFT VTRS++RS GI+ GS ME ST PPRPSTNL+RPS GVVQMR   SPSS   SS P
Subjt:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP

TYK23885.1 hypothetical protein E5676_scaffold419G00630 [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  SSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSS
        SSSS++TPSPMS DQ+AM+LGFT VTRS++RS  I  GS  ESST PPRPS NL+R SSGVVQMR P SPSS
Subjt:  SSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSS

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein3.1e-1563.33Show/hide
Query:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP
        T   S    +  SSS++ PSP+S DQYAM+LGFT VTR  +RS GI  GS  ESST PPRPSTNL+RPSSGVVQMR P SPSS   SS P
Subjt:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP

A0A5A7U8A0 Uncharacterized protein8.8e-1866.67Show/hide
Query:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP
        T   S    + SSSS++TPSPMS DQYAM+LGFT VTRS++RS  I+ GS  ESST PP+PSTNL+RPS GVVQMRSPVSPSS   SS P
Subjt:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP

A0A5D3BPD3 Uncharacterized protein7.0e-1565.12Show/hide
Query:  SKGK-SSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIPS
        SKG  +SSSS++ PSP   DQYAME+GFT VTRS++RS  I+ GS  ES+T PPRPS NL+ PSSGVVQMR P SPSS   SS PS
Subjt:  SKGK-SSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIPS

A0A5D3CXD5 Uncharacterized protein9.1e-1563.33Show/hide
Query:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP
        T   S    + SSSS++TPSP S DQ AM+LGFT VTRS++RS GI+ GS ME ST PPRPSTNL+RPS GVVQMR   SPSS   SS P
Subjt:  TAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIP

A0A5D3DJW3 Uncharacterized protein5.9e-1472.22Show/hide
Query:  SSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSS
        SSSS++TPSPMS DQ+AM+LGFT VTRS++RS  I  GS  ESST PPRPS NL+R SSGVVQMR P SPSS
Subjt:  SSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGAAAATGAAGAAGAAGAATCCTATAGTACATGTTATAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGG
CTAGGAGACCGACCCAGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCATATGGTCGGCCTCTGCCCAAGGCCGAGGCCGACCATTCGGCCCGC
TTGTGCGGGCCGAGCTCGGTCACCTCCTCTCAGTCCCTGATGCCTTTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACACCTCCGAATTCCTAAAAACCCTA
GGAGCACGAGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGCAAAAGCCTCATTTTCAAAGGGCAAAAGTTCATCCTCTTCAAGTACAACACCCTCTCCA
ATGAGTGATGATCAATATGCTATGGAATTGGGATTTACTCCGGTAACCCGTTCCAAAACAAGGTCCGTCGGTATACAACCTGGATCGACCATGGAGTCATCTACT
CCACCTCCAAGGCCTTCAACCAATTTAGTCCGTCCTTCAAGCGGAGTTGTTCAAATGAGATCTCCTGTCTCACCATCTTCAAAATCGGGATCATCTATCCCATCT
CCTTCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGAAAATGAAGAAGAAGAATCCTATAGTACATGTTATAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGG
CTAGGAGACCGACCCAGAGGAAGAACCGACCAAAGGGCCGGGCCAACTTGGCCCGACCCATATGGTCGGCCTCTGCCCAAGGCCGAGGCCGACCATTCGGCCCGC
TTGTGCGGGCCGAGCTCGGTCACCTCCTCTCAGTCCCTGATGCCTTTAGCCGCCCCGGTTTCGCCTGGTTTGTCCCGAAACACCTCCGAATTCCTAAAAACCCTA
GGAGCACGAGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGCAAAAGCCTCATTTTCAAAGGGCAAAAGTTCATCCTCTTCAAGTACAACACCCTCTCCA
ATGAGTGATGATCAATATGCTATGGAATTGGGATTTACTCCGGTAACCCGTTCCAAAACAAGGTCCGTCGGTATACAACCTGGATCGACCATGGAGTCATCTACT
CCACCTCCAAGGCCTTCAACCAATTTAGTCCGTCCTTCAAGCGGAGTTGTTCAAATGAGATCTCCTGTCTCACCATCTTCAAAATCGGGATCATCTATCCCATCT
CCTTCAAGATAA
Protein sequenceShow/hide protein sequence
MELKMKKKNPIVHVIGNFGPPDAQGADEDVRAKIGLGDRPRGRTDQRAGPTWPDPYGRPLPKAEADHSARLCGPSSVTSSQSLMPLAAPVSPGLSRNTSEFLKTL
GARAGHVFPLIYKFTAKASFSKGKSSSSSSTTPSPMSDDQYAMELGFTPVTRSKTRSVGIQPGSTMESSTPPPRPSTNLVRPSSGVVQMRSPVSPSSKSGSSIPS
PSR