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Spg025084 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025084
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain
Genome locationscaffold12:9444916..9446725
RNA-Seq ExpressionSpg025084
SyntenySpg025084
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013650.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4096.7Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG
        MSNDAKRSIQGNLMVKSVSEDRKP AVAT GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG

KAG7026318.1 Dynein light chain 2, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]4.3e-4094.57Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGN MVK+VSEDRKP AVAT GKKIVIKSADMFGDVQKEAVDVAI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

XP_022959519.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]8.6e-4195.65Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP AVAT GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

XP_023006429.1 dynein light chain 1, cytoplasmic [Cucurbita maxima]5.6e-4093.48Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP  +AT GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

XP_038906782.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]2.5e-4093.48Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKPPAVAT GKKIVIKSADMFGDVQKEA++VAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

TrEMBL top hitse value%identityAlignment
A0A1S3C7T8 Dynein light chain4.6e-4092.39Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKPPAV   GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKD+AE IKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1EQC6 Dynein light chain7.9e-4093.48Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGN MVK+VSEDRKP AVAT GKKIVIKSADMFGDVQKEAVDVAI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1H8A5 Dynein light chain4.2e-4195.65Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP AVAT GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1KH59 Dynein light chain1.0e-3992.39Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGN MVK+VSEDRKP AVAT GKKIVIKSADMFGDVQKEAVD+AI AFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

A0A6J1L253 Dynein light chain2.7e-4093.48Show/hide
Query:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        MSNDAKRSIQGNLMVKSVSEDRKP  +AT GKKIVIKSADMFGDVQKEA+DVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFG+
Subjt:  MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic8.2e-1863.93Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++A+D A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q39580 Dynein 8 kDa light chain, flagellar outer arm6.2e-1860.61Show/hide
Query:  VATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +A+   K VIK+ADM  ++Q +AVD A  A EK+++EKD+A YIKKEFD++H PTWHCIVGRNFG+
Subjt:  VATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q3MHR3 Dynein light chain 2, cytoplasmic8.2e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q96FJ2 Dynein light chain 2, cytoplasmic8.2e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Q9D0M5 Dynein light chain 2, cytoplasmic8.2e-1865.57Show/hide
Query:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +K VIK+ADM  D+Q++AVD A  A EK+++EKD+A YIKKEFDK++ PTWHCIVGRNFG+
Subjt:  KKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.3e-0640.98Show/hide
Query:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVE--KDVAEYIKKEFDKRHGPTWHCIVGRNFG
        K +++ +DM   +Q +A+  A  A +   V   K +A +IKKEFD+R+G  W C+VG NFG
Subjt:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVE--KDVAEYIKKEFDKRHGPTWHCIVGRNFG

AT3G16120.1 Dynein light chain type 1 family protein1.6e-0537.7Show/hide
Query:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSV--EKDVAEYIKKEFDKRHGPTWHCIVGRNFG
        K  ++  DM   +Q +A+ +A  + +   V     +A +IKKEFD+R+G  W C+VG NFG
Subjt:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSV--EKDVAEYIKKEFDKRHGPTWHCIVGRNFG

AT4G15930.1 Dynein light chain type 1 family protein7.1e-2558.7Show/hide
Query:  KRSIQGNLMVKSVSEDRKP-----PAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        K+S+ G    +++ +DR+       A   AGK+ VIKSADM  D+QKEA+++AI+AFEK+SVEKD+AE IKKEFDK+HG TWHCIVGRNFG+
Subjt:  KRSIQGNLMVKSVSEDRKP-----PAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN

AT4G27360.1 Dynein light chain type 1 family protein2.1e-0537.1Show/hide
Query:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVEK--DVAEYIKKEFDKRHGPTWHCIVGRNFGN
        K V+   DM   ++++A+ +A  A +   V +   +A +IKKEFD+ +G  W CIVG +FG+
Subjt:  KIVIKSADMFGDVQKEAVDVAIAAFEKHSVEK--DVAEYIKKEFDKRHGPTWHCIVGRNFGN

AT5G20110.1 Dynein light chain type 1 family protein1.1e-0641.38Show/hide
Query:  QGNLMVKSVSEDRKPPAVATAGKKIV-IKSADMFGDVQKEAVDVA---IAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN
        +G   V  V  D      A A    V I +ADM G +Q  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FG+
Subjt:  QGNLMVKSVSEDRKPPAVATAGKKIV-IKSADMFGDVQKEAVDVA---IAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAACGATGCGAAGAGAAGCATCCAAGGGAATCTAATGGTGAAATCTGTATCGGAAGATCGGAAACCGCCGGCGGTGGCCACTGCCGGCAAGAAAATTGTCATTAA
GAGTGCCGATATGTTTGGTGATGTGCAGAAGGAGGCTGTTGATGTTGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATGTAGCGGAGTATATTAAGAAAGAGT
TCGATAAGAGGCATGGACCGACCTGGCATTGCATTGTGGGCCGTAATTTTGGTAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAACGATGCGAAGAGAAGCATCCAAGGGAATCTAATGGTGAAATCTGTATCGGAAGATCGGAAACCGCCGGCGGTGGCCACTGCCGGCAAGAAAATTGTCATTAA
GAGTGCCGATATGTTTGGTGATGTGCAGAAGGAGGCTGTTGATGTTGCCATAGCTGCATTTGAAAAGCATAGTGTAGAGAAGGATGTAGCGGAGTATATTAAGAAAGAGT
TCGATAAGAGGCATGGACCGACCTGGCATTGCATTGTGGGCCGTAATTTTGGTAACTGA
Protein sequenceShow/hide protein sequence
MSNDAKRSIQGNLMVKSVSEDRKPPAVATAGKKIVIKSADMFGDVQKEAVDVAIAAFEKHSVEKDVAEYIKKEFDKRHGPTWHCIVGRNFGN