; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025114 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025114
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit B-like
Genome locationscaffold12:9861592..9864567
RNA-Seq ExpressionSpg025114
SyntenySpg025114
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR013955 - Replication factor A, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5560633.1 hypothetical protein RHGRI_003829 [Rhododendron griersonianum]1.2e-2831.68Show/hide
Query:  KASRVGDFFPVYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMS
        KA  VG      V  +   C +   LTLW D+ATNEG  LE+     PI+    +K++ Y G LSM+T   + + ++P   ++  +K+R    L  T  +
Subjt:  KASRVGDFFPVYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMS

Query:  TFIPPSKKMERAKLVSIKDIIHGLV---DDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDL-VQFIRKYMLKLKICDGQMTAHI
        T     K  E A+ V I D++   +    + YC    +I+ I N + PW+  CK+CN++V P G Q M  C  C D   +   +Y++K+ + DG+   +I
Subjt:  TFIPPSKKMERAKLVSIKDIIHGLV---DDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDL-VQFIRKYMLKLKICDGQMTAHI

Query:  TAFEAAEVIVGSSVSHYATQILQMKKKEDS--KIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVL-------HVKKKIK
        T FEAAE I G SV       ++ K++E++  K+      A GK Y F  ++DK  + DR+ G  +  E+      + D ET+E+          KK IK
Subjt:  TAFEAAEVIVGSSVSHYATQILQMKKKEDS--KIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVL-------HVKKKIK

Query:  IER
        +E+
Subjt:  IER

KAG5563556.1 hypothetical protein RHGRI_006105 [Rhododendron griersonianum]5.8e-2831.35Show/hide
Query:  KASRVGDFFPVYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMS
        KA  VG      V  +   C +   LTLW D+ATNEG  LE+     PI+    +K++ Y G LSM+T   + + ++P   ++  +K+R    L    M 
Subjt:  KASRVGDFFPVYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMS

Query:  TFIPPSKKMERAKLVSIKDIIHGLV---DDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDL-VQFIRKYMLKLKICDGQMTAHI
              K  E A+ V I D++   +    + YC    +I+ I N + PW+  CK+CN++V P G Q M  C  C D   +   +Y++K+ + DG+   +I
Subjt:  TFIPPSKKMERAKLVSIKDIIHGLV---DDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDL-VQFIRKYMLKLKICDGQMTAHI

Query:  TAFEAAEVIVGSSVSHYATQILQMKKKEDS--KIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVL-------HVKKKIK
        T FEAAE I G SV       ++ K++E++  K+      A GK Y F  ++DK  + DR+ G  +  E+      + D ET+E+          KK IK
Subjt:  TAFEAAEVIVGSSVSHYATQILQMKKKEDS--KIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVL-------HVKKKIK

Query:  IER
        +E+
Subjt:  IER

KAG5574299.1 hypothetical protein H5410_054433 [Solanum commersonii]3.4e-2832.71Show/hide
Query:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLV
        +TLW D A N+G  LE+     PI+   +++V++++G   ++T   S++LI P F  + DL+  RE++       T I P+K M+RA  V +  I+ G  
Subjt:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLV

Query:  DDLYCCII---GSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCN-DLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK
         D   C+     +I +I+NKD PW+  CK C+++V     +    CNNCN D V++  +Y L+L++C+G+  A +  FEAA+ ++G +V  Y        
Subjt:  DDLYCCII---GSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCN-DLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK

Query:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDL---ETLEVLHVKKKIK
        KK++   YR  +L++   + FLVR+D      R     +V+EI++VE E   +   E   V   KK+ K
Subjt:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDL---ETLEVLHVKKKIK

XP_016485940.1 PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Nicotiana tabacum]4.4e-2833.2Show/hide
Query:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLV
        +TLWND +  +G  L++ I   P++ A +++   Y G  S++TT  S+I+I P F  +  L++  +       +   + PS +++ A+ V I+DI     
Subjt:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLV

Query:  D---DLYCCIIGSIVEIVNKDNPWFEKCKLCNQRV-YPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK
        D   D Y      I +I+NKD PW+  CK C ++V   N   K  HC   N  V +  +Y+LKL++ D +   ++T FE+   ++G  V+ Y   I Q  
Subjt:  D---DLYCCIIGSIVEIVNKDNPWFEKCKLCNQRV-YPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK

Query:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVE
        KKE+ K YR  +L++ K + FLV++D K  GDR    F+ +EI +VE
Subjt:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVE

XP_020253860.1 replication protein A 70 kDa DNA-binding subunit B-like [Asparagus officinalis]1.8e-2931.77Show/hide
Query:  GKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDI
        G P R TL+ DLATNEG  LE +I + P+I   + K+++Y+G+ S+++ +   + I P    + +L++  +L        +   PS   + AK + I DI
Subjt:  GKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDI

Query:  IH---GLVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQF-IRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQ
        +H     +   YC    +I  I+N+ +PWF  CK C+++V  + S++  + + C  ++   I +Y++K+ + +G   A +T F+ AE ++G     + T+
Subjt:  IH---GLVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQF-IRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQ

Query:  ILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEIN-----KVEVEESDLETLEVLHVKKKIKI
          + +K   S  Y+ F+L+ GKT+KFLV++DKK + +R +G+ + QEI       + V++ D  TLE+   KKKIK+
Subjt:  ILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEIN-----KVEVEESDLETLEVLHVKKKIKI

TrEMBL top hitse value%identityAlignment
A0A1J6KWZ0 Rep_fac-A_C domain-containing protein4.0e-2730.07Show/hide
Query:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLK--ERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHG
        +TLW ++A  +G  L+  I   PI++  N+K   Y G   ++TT  S+++I P F  +  L+    R  L D       + PS+ ++ A+ V I DI H 
Subjt:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLK--ERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHG

Query:  ----LVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQ
               D Y      I  I+NKD+PW+  C  C ++V  +    +  C  C   V++  +Y+LKL++ D +   +IT FEA + ++G  V  Y   I Q
Subjt:  ----LVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQ

Query:  MKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKV------EVEESDLETLEVLHVKKKIKIE
          KKE+SK YR  + ++ K + FLV++D +  GDR+    + +E+++V      E+E+ +++  + +   K+I+ E
Subjt:  MKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKV------EVEESDLETLEVLHVKKKIKIE

A0A1S4BAI4 replication protein A 70 kDa DNA-binding subunit B-like2.1e-2833.2Show/hide
Query:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLV
        +TLWND +  +G  L++ I   P++ A +++   Y G  S++TT  S+I+I P F  +  L++  +       +   + PS +++ A+ V I+DI     
Subjt:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLV

Query:  D---DLYCCIIGSIVEIVNKDNPWFEKCKLCNQRV-YPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK
        D   D Y      I +I+NKD PW+  CK C ++V   N   K  HC   N  V +  +Y+LKL++ D +   ++T FE+   ++G  V+ Y   I Q  
Subjt:  D---DLYCCIIGSIVEIVNKDNPWFEKCKLCNQRV-YPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK

Query:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVE
        KKE+ K YR  +L++ K + FLV++D K  GDR    F+ +EI +VE
Subjt:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVE

A0A1S4BU38 replication protein A 70 kDa DNA-binding subunit B-like4.4e-2629.78Show/hide
Query:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHG--
        +TLW ++A  +G  L+  I   PI+   ++K   Y G   ++TT  S+++  P F  +  L+     +       T + PS+ +++A+ V I DI H   
Subjt:  LTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHG--

Query:  --LVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK
            +D Y      I +I+N D+PW+  CK C ++V  +    +  C  C   V++  +Y+LKL++ D +   +IT FEA + ++G  V+ Y   I Q  
Subjt:  --LVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHYATQILQMK

Query:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKV----EVEESDLETLEVLHVKKKIKIE
        KKE+SK YR  + ++ K + FLV++D +  GDR     + +E+++V     +E +D E      +KK  +IE
Subjt:  KKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKV----EVEESDLETLEVLHVKKKIKIE

M1DP79 Replication factor A6.9e-2730.58Show/hide
Query:  VYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKME
        + V   ++EC     +TLW D A N+G  LE+     PI+   +++V++Y+G   ++T   S++LI P F  + DL+  RE++       T   PSK M 
Subjt:  VYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKME

Query:  RAKLVSIKDIIHGLVDDLYCCII---GSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCN-DLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIV
        +A  V++ +I+ G + D    +      IV+I+N + PW+  CK C+++V     Q    C NCN    ++  +Y L+L++CD +  A +T F+AA++++
Subjt:  RAKLVSIKDIIHGLVDDLYCCII---GSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCN-DLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIV

Query:  GSSVSHYATQILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVE-------VEESDLETLEVLHVKKKIKIER
        G +V  Y       +K E+S  YRN + ++ K +KFLVR+D            + QEI+ VE        +ES  +T       K   +ER
Subjt:  GSSVSHYATQILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVE-------VEESDLETLEVLHVKKKIKIER

M1DXI7 Replication protein A12.8e-2831.73Show/hide
Query:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIK
        E  +P  +TLW D A N+G  L++     PI+   +++V++Y+G   ++T   S++LI P F  + DL+  RE +++       + P+K M+RA  V + 
Subjt:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTFIPPSKKMERAKLVSIK

Query:  DIIHGLV----DDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCN-DLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHY
         I++GL+    D +Y     +IV+I+NKD PW+  CK C ++V     ++   C NCN D V++  +Y L+L++C G+  A +  FEAA  ++G      
Subjt:  DIIHGLV----DDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCN-DLVQFIRKYMLKLKICDGQMTAHITAFEAAEVIVGSSVSHY

Query:  ATQILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVLHVKK
                KKE+   YRN +L++ K + FLVR+D      R     + +EI++++ E   +   EV  V+K
Subjt:  ATQILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVLHVKK

SwissProt top hitse value%identityAlignment
Q10Q08 Replication protein A 70 kDa DNA-binding subunit B2.8e-0926.67Show/hide
Query:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTF--------IPPSKKM-
        +  K   ++LWNDLAT  G EL + +   PII   +LKV+ ++G LS++T   S I++ PD  +++ L+   +     T M++         +  ++ M 
Subjt:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTF--------IPPSKKM-

Query:  -ERAKLVSIKDIIHGLVDDLYCCIIGSIVEIVNKDNP-WFEKCKLCNQRVYPNGSQKMTHCNNC--NDLVQFIRKYMLKLKICDGQMTAHITAF-EAAEV
         +R  L  I    +   D      + + + ++  D   W+  CK CN++V          C  C  ND    +R Y++ +K+ D    A ++ F + AE 
Subjt:  -ERAKLVSIKDIIHGLVDDLYCCIIGSIVEIVNKDNP-WFEKCKLCNQRVYPNGSQKMTHCNNC--NDLVQFIRKYMLKLKICDGQMTAHITAF-EAAEV

Query:  IVGSSVSHYATQILQMKKKEDSKIY
        IVG S    A ++ +++K+E    Y
Subjt:  IVGSSVSHYATQILQMKKKEDSKIY

Q9FME0 Replication protein A 70 kDa DNA-binding subunit D1.3e-0925.34Show/hide
Query:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLK-----ERRELLLDHTYMSTFIPPSKKMERAK
        E  K   ++LWNDLAT  G EL +    +P+I   +LKV  ++G +S++T   SN++I P+  ++K LK     E +E+ +  + + + + PS K     
Subjt:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLK-----ERRELLLDHTYMSTFIPPSKKMERAK

Query:  LVSIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNC-NDLVQFIRKYMLKLKICDGQMTAHITAF-EAAE
        L + + ++  +  +        ++      I  I      W++ CK CN++V          C  C     +   +Y++ +K+ D      I++F + AE
Subjt:  LVSIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNC-NDLVQFIRKYMLKLKICDGQMTAHITAF-EAAE

Query:  VIVGSSVSHYATQILQMKKKE
         I+G S    A ++ ++K +E
Subjt:  VIVGSSVSHYATQILQMKKKE

Q9SD82 Replication protein A 70 kDa DNA-binding subunit B5.3e-0825.25Show/hide
Query:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTF---IPPSKKMERAKLV
        E  K   ++LWNDLAT  G EL +   ++P+I   +LKV  ++G +S++T   SN++I P+  ++  LK   +     T MS     +  S       + 
Subjt:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTF---IPPSKKMERAKLV

Query:  SIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIR-KYMLKLKICDGQMTAHITAF-EAAEVI
        S +  +  +  +        ++      I  I      W+  CK CN++V          C +C    Q    +Y++ +K+ D      ++AF + AE I
Subjt:  SIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIR-KYMLKLKICDGQMTAHITAF-EAAEVI

Query:  VG
        +G
Subjt:  VG

Arabidopsis top hitse value%identityAlignment
AT5G08020.1 RPA70-kDa subunit B3.7e-0925.25Show/hide
Query:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTF---IPPSKKMERAKLV
        E  K   ++LWNDLAT  G EL +   ++P+I   +LKV  ++G +S++T   SN++I P+  ++  LK   +     T MS     +  S       + 
Subjt:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLKERRELLLDHTYMSTF---IPPSKKMERAKLV

Query:  SIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIR-KYMLKLKICDGQMTAHITAF-EAAEVI
        S +  +  +  +        ++      I  I      W+  CK CN++V          C +C    Q    +Y++ +K+ D      ++AF + AE I
Subjt:  SIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIR-KYMLKLKICDGQMTAHITAF-EAAEVI

Query:  VG
        +G
Subjt:  VG

AT5G61000.1 Replication factor-A protein 1-related8.9e-1125.34Show/hide
Query:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLK-----ERRELLLDHTYMSTFIPPSKKMERAK
        E  K   ++LWNDLAT  G EL +    +P+I   +LKV  ++G +S++T   SN++I P+  ++K LK     E +E+ +  + + + + PS K     
Subjt:  ECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDLK-----ERRELLLDHTYMSTFIPPSKKMERAK

Query:  LVSIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNC-NDLVQFIRKYMLKLKICDGQMTAHITAF-EAAE
        L + + ++  +  +        ++      I  I      W++ CK CN++V          C  C     +   +Y++ +K+ D      I++F + AE
Subjt:  LVSIKDIIHGLVDD--------LYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNC-NDLVQFIRKYMLKLKICDGQMTAHITAF-EAAE

Query:  VIVGSSVSHYATQILQMKKKE
         I+G S    A ++ ++K +E
Subjt:  VIVGSSVSHYATQILQMKKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGTATGCGTCGGCGGCTGATTTCTCGCGATTCGATCACCACTACCAGCAACAACAGAGCAAGCCGAAGGCCTCACGAGTCGGCGATTTTTTTCCTGTCTATGT
AGCGTTTGTAATCTTGGAATGTGGCAAGCCATTTAGATTGACACTGTGGAATGATTTGGCAACCAATGAAGGTTTAGAATTAGAAGAACAAATTATTCACAATCCAATAA
TTTTAGCATTCAATCTGAAGGTGAACATGTATGAAGGAGAATTAAGCATGGCAACAACAATGACGAGCAACATCTTAATTGAACCAGATTTTGTAGATTCAAAAGATCTA
AAAGAACGGAGGGAACTTCTTTTGGATCACACATACATGTCTACTTTTATTCCTCCCTCTAAAAAAATGGAAAGAGCAAAATTAGTAAGCATCAAAGATATTATTCATGG
GTTAGTTGATGATTTATATTGTTGTATCATTGGCTCAATTGTCGAGATAGTTAACAAAGACAATCCATGGTTTGAGAAATGCAAACTTTGCAACCAGAGAGTGTATCCCA
ATGGAAGTCAGAAAATGACTCACTGTAACAATTGCAACGACCTTGTCCAATTCATTAGAAAATATATGCTAAAGCTTAAAATTTGTGATGGCCAAATGACTGCACATATA
ACTGCTTTTGAAGCTGCAGAAGTCATAGTTGGAAGTAGTGTTTCCCATTATGCAACCCAAATTTTACAGATGAAAAAGAAGGAGGATTCCAAAATTTATCGCAATTTCAT
CCTCGCACAAGGAAAAACTTACAAATTCCTCGTTCGCATGGACAAGAAGTTTGAAGGAGATCGATCAAAGGGACATTTTGTGGTTCAAGAGATAAATAAAGTAGAGGTTG
AAGAATCTGACTTAGAAACTCTTGAAGTTTTACATGTTAAGAAAAAAATTAAAATAGAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATCGTATGCGTCGGCGGCTGATTTCTCGCGATTCGATCACCACTACCAGCAACAACAGAGCAAGCCGAAGGCCTCACGAGTCGGCGATTTTTTTCCTGTCTATGT
AGCGTTTGTAATCTTGGAATGTGGCAAGCCATTTAGATTGACACTGTGGAATGATTTGGCAACCAATGAAGGTTTAGAATTAGAAGAACAAATTATTCACAATCCAATAA
TTTTAGCATTCAATCTGAAGGTGAACATGTATGAAGGAGAATTAAGCATGGCAACAACAATGACGAGCAACATCTTAATTGAACCAGATTTTGTAGATTCAAAAGATCTA
AAAGAACGGAGGGAACTTCTTTTGGATCACACATACATGTCTACTTTTATTCCTCCCTCTAAAAAAATGGAAAGAGCAAAATTAGTAAGCATCAAAGATATTATTCATGG
GTTAGTTGATGATTTATATTGTTGTATCATTGGCTCAATTGTCGAGATAGTTAACAAAGACAATCCATGGTTTGAGAAATGCAAACTTTGCAACCAGAGAGTGTATCCCA
ATGGAAGTCAGAAAATGACTCACTGTAACAATTGCAACGACCTTGTCCAATTCATTAGAAAATATATGCTAAAGCTTAAAATTTGTGATGGCCAAATGACTGCACATATA
ACTGCTTTTGAAGCTGCAGAAGTCATAGTTGGAAGTAGTGTTTCCCATTATGCAACCCAAATTTTACAGATGAAAAAGAAGGAGGATTCCAAAATTTATCGCAATTTCAT
CCTCGCACAAGGAAAAACTTACAAATTCCTCGTTCGCATGGACAAGAAGTTTGAAGGAGATCGATCAAAGGGACATTTTGTGGTTCAAGAGATAAATAAAGTAGAGGTTG
AAGAATCTGACTTAGAAACTCTTGAAGTTTTACATGTTAAGAAAAAAATTAAAATAGAAAGATAG
Protein sequenceShow/hide protein sequence
MKSYASAADFSRFDHHYQQQQSKPKASRVGDFFPVYVAFVILECGKPFRLTLWNDLATNEGLELEEQIIHNPIILAFNLKVNMYEGELSMATTMTSNILIEPDFVDSKDL
KERRELLLDHTYMSTFIPPSKKMERAKLVSIKDIIHGLVDDLYCCIIGSIVEIVNKDNPWFEKCKLCNQRVYPNGSQKMTHCNNCNDLVQFIRKYMLKLKICDGQMTAHI
TAFEAAEVIVGSSVSHYATQILQMKKKEDSKIYRNFILAQGKTYKFLVRMDKKFEGDRSKGHFVVQEINKVEVEESDLETLEVLHVKKKIKIER