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Spg025176 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025176
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand
Genome locationscaffold13:39600838..39601116
RNA-Seq ExpressionSpg025176
SyntenySpg025176
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.4e-3585.71Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL
        MGNSKS  YKRVLVPFSEEQLA VF++HDRDGDG LTKEELKQAF YLGSRFS+FR EEALRAADTNGDGVISMDEM KLIKY K+RKYT+
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3582.61Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC
        MGNSKS  YKRVLVP +EEQLAG+F+SHDRDGDGKLTKEELKQAF+YLGSRFSSFRA+EALRAAD +GDG I+M EM KLI+YTK+RKYTLC
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC

KAG6585663.1 hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3481.52Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC
        MGN+KSTNYKRVLVPF+EEQLA +F+SHDRDGDGKL+KEELKQAF+YLGSRFSSFR +EALRAADTNGDG ISMDEM KLIKYTK+   ++C
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3584.78Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC
        MGNSKS  YKRVLVPFSEEQLA VF++HD DGDGKLTKEELKQAF YLGSRFSSFR EEALRAADT+GDG ISM EM KLI+Y KSRKYTLC
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-3886.96Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC
        MGN+KSTNYKRVLVPF+EEQLA +F+SHDRDGDGKL+KEELKQAF+YLGSRFSSFR +EALRAADTNGDG ISMDEM KLIKYTK RKYTLC
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LP43 Uncharacterized protein3.6e-1654.76Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYT
        MG S    +K      +E ++A VF++HD+DGDG+LTKEELK AF YLG +F++FR  +AL AAD N D VIS +EM KLI YT
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYT

A0A0A0LRB6 Uncharacterized protein3.4e-3584.62Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL
        MGNSKS  YKRVLVPFSEEQLA VF++HDRDGDG LTKEELKQAF YLGSRF +FR EEALRAADTNGDGVISMDEM KLIKY K+RKYT+
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL

A0A2N9FYQ0 Uncharacterized protein5.0e-1849.43Show/hide
Query:  KSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL
        K  ++KR  +PF+EEQL  +F+SHD DGDGKL+++E+K+AF YLGSR+ ++RA +A+  AD + DG I  +E+KKL++Y     YT+
Subjt:  KSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein6.9e-3685.71Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL
        MGNSKS  YKRVLVPFSEEQLA VF++HDRDGDG LTKEELKQAF YLGSRFS+FR EEALRAADTNGDGVISMDEM KLIKY K+RKYT+
Subjt:  MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL

A0A7N2KRS3 Uncharacterized protein2.0e-1954.02Show/hide
Query:  KSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL
        K+  +KR  VPF+E+QL  +F+SHD DGDGKL+++ELK AF YLGSR+ ++R ++ALR AD N DG I+ DE+KKL++Y     YT+
Subjt:  KSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTL

SwissProt top hitse value%identityAlignment
P05933 Calmodulin2.2e-0740Show/hide
Query:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        +EE++   F+  D+DG+G +T EEL    + LG R S     + +R ADT+GDGVI+ +E  ++I
Subjt:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

P24044 Calmodulin2.9e-0738.46Show/hide
Query:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        +EE+L   FR  DRDGDG ++ +EL+   + LG + ++   +E +R AD +GDG I+ +E  K++
Subjt:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

P27482 Calmodulin-like protein 31.4e-0635.38Show/hide
Query:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        +EE++   FR  D+DG+G ++  EL+   + LG + S    +E +RAADT+GDG ++ +E  +++
Subjt:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

P62203 Calmodulin2.9e-0738.46Show/hide
Query:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        +EE+L   FR  DRDGDG ++ +EL+   + LG + ++   +E +R AD +GDG I+ +E  K++
Subjt:  SEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

Q9LI84 Probable calcium-binding protein CML165.0e-0741.18Show/hide
Query:  VPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        V  ++EQL  VFRS DRDG+G +T  EL  + + +G   +     E +  AD+NGDGVIS +E   ++
Subjt:  VPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family1.0e-0739.71Show/hide
Query:  VPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        V  + EQL  +F+S DRDG+G ++  EL  A + +G   +     E ++ ADTNGDGVIS  E   ++
Subjt:  VPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

AT1G76650.1 calmodulin-like 381.7e-0739.68Show/hide
Query:  QLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIK
        +L  VF   D + DG+++ EEL+++F  LG + S   A  A+R +DT+GDG++  +E  +LIK
Subjt:  QLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIK

AT1G76650.3 calmodulin-like 381.7e-0739.68Show/hide
Query:  QLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIK
        +L  VF   D + DG+++ EEL+++F  LG + S   A  A+R +DT+GDG++  +E  +LIK
Subjt:  QLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIK

AT3G25600.1 Calcium-binding EF-hand family protein3.5e-0841.18Show/hide
Query:  VPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI
        V  ++EQL  VFRS DRDG+G +T  EL  + + +G   +     E +  AD+NGDGVIS +E   ++
Subjt:  VPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLI

AT4G04695.1 calcium-dependent protein kinase 312.3e-0736.71Show/hide
Query:  MGNSKSTNYKRVLVPFSEEQLAG---VFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDE
        M   K    K +    SEE++ G   +F + D D  G +T EELK   + LGS  S    E+ + AAD +G+G I +DE
Subjt:  MGNSKSTNYKRVLVPFSEEQLAG---VFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTCCAAAAGTACAAATTACAAACGAGTTCTGGTTCCGTTCTCAGAGGAGCAACTGGCCGGAGTTTTCAGGAGCCACGACCGAGACGGTGACGGGAAGCTGAC
AAAGGAGGAGTTGAAGCAAGCCTTCAGCTATCTGGGCTCACGCTTCAGCTCCTTCAGAGCCGAAGAAGCCCTACGCGCCGCCGATACCAACGGCGACGGCGTCATCAGCA
TGGACGAGATGAAGAAGCTAATTAAGTATACCAAAAGTCGTAAATACACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAATTCCAAAAGTACAAATTACAAACGAGTTCTGGTTCCGTTCTCAGAGGAGCAACTGGCCGGAGTTTTCAGGAGCCACGACCGAGACGGTGACGGGAAGCTGAC
AAAGGAGGAGTTGAAGCAAGCCTTCAGCTATCTGGGCTCACGCTTCAGCTCCTTCAGAGCCGAAGAAGCCCTACGCGCCGCCGATACCAACGGCGACGGCGTCATCAGCA
TGGACGAGATGAAGAAGCTAATTAAGTATACCAAAAGTCGTAAATACACTCTTTGTTAA
Protein sequenceShow/hide protein sequence
MGNSKSTNYKRVLVPFSEEQLAGVFRSHDRDGDGKLTKEELKQAFSYLGSRFSSFRAEEALRAADTNGDGVISMDEMKKLIKYTKSRKYTLC