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Spg025216 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025216
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold13:42109776..42112427
RNA-Seq ExpressionSpg025216
SyntenySpg025216
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN63684.1 hypothetical protein VITISV_020448 [Vitis vinifera]6.4e-0836.84Show/hide
Query:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFD--NVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKD
        ++GF G+ +E  +  R L     +L  WN+  F   N +K   +   KR   + I  E+I WR+KA+VKW KEGD N+ FF       +NR  I  L  +
Subjt:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFD--NVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKD

Query:  SGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI
         G V+    +I EEI+ +F KLY  P G  W I
Subjt:  SGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI

RVW25033.1 Transposon TX1 uncharacterized 149 kDa protein, partial [Vitis vinifera]3.8e-0838.46Show/hide
Query:  WNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGL
        WN+  F  + +   K   K    + I  E+I WR+KA VKW KEGD N+ FF       +NR  I +L  + G VM     I+EEI+ +F KLY  P G 
Subjt:  WNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGL

Query:  LWKI
         W++
Subjt:  LWKI

RVW69329.1 putative ribonuclease H protein [Vitis vinifera]4.9e-0847.37Show/hide
Query:  EDISWRKKAKVKWAKEGDANTVFFQNY--RRRCKNRIDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI
        E+I W++KAK+KW KEGD N+  F     RRR KN I LL  + G V+     I EEI+ +F KLY  PPG  W++
Subjt:  EDISWRKKAKVKWAKEGDANTVFFQNY--RRRCKNRIDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI

RVW90395.1 hypothetical protein CK203_045762 [Vitis vinifera]8.4e-0837.4Show/hide
Query:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSG
        ++GF G+ +E  +  R L     +L  WN+  F       LK K KR   + I  E+I WR+KAKVKW KEGD N+ F+       +NR  I  L  + G
Subjt:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSG

Query:  EVMRRDFKIEEEIISFFAKLY--PPGLLWKI
         V++    I EEI+ +F KLY  P G  W +
Subjt:  EVMRRDFKIEEEIISFFAKLY--PPGLLWKI

RVX07512.1 hypothetical protein CK203_025217 [Vitis vinifera]1.3e-0830.86Show/hide
Query:  FTGFCGSVFELEEKRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGE
        ++GF G+    +  R L     +L  WN+  F  + +      +     D I   +I WR+KA+VKW KEGD N+ F+       +NR  I  L  + G 
Subjt:  FTGFCGSVFELEEKRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGE

Query:  VMRRDFKIEEEIISFFAKLY--PPGLLWKI-------------WIGALFQLVEDRYAEELGF
        V++    I EEI+ +F KLY  P G  W +             +  A+FQ   D + E+LGF
Subjt:  VMRRDFKIEEEIISFFAKLY--PPGLLWKI-------------WIGALFQLVEDRYAEELGF

TrEMBL top hitse value%identityAlignment
A0A438CP97 Transposon TX1 uncharacterized 149 kDa protein (Fragment)1.8e-0838.46Show/hide
Query:  WNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGL
        WN+  F  + +   K   K    + I  E+I WR+KA VKW KEGD N+ FF       +NR  I +L  + G VM     I+EEI+ +F KLY  P G 
Subjt:  WNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGL

Query:  LWKI
         W++
Subjt:  LWKI

A0A438GAV6 Putative ribonuclease H protein2.4e-0847.37Show/hide
Query:  EDISWRKKAKVKWAKEGDANTVFFQNY--RRRCKNRIDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI
        E+I W++KAK+KW KEGD N+  F     RRR KN I LL  + G V+     I EEI+ +F KLY  PPG  W++
Subjt:  EDISWRKKAKVKWAKEGDANTVFFQNY--RRRCKNRIDLLVKDSGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI

A0A438I108 Uncharacterized protein4.1e-0837.4Show/hide
Query:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSG
        ++GF G+ +E  +  R L     +L  WN+  F       LK K KR   + I  E+I WR+KAKVKW KEGD N+ F+       +NR  I  L  + G
Subjt:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSG

Query:  EVMRRDFKIEEEIISFFAKLY--PPGLLWKI
         V++    I EEI+ +F KLY  P G  W +
Subjt:  EVMRRDFKIEEEIISFFAKLY--PPGLLWKI

A0A438JEY9 Reverse transcriptase domain-containing protein6.3e-0930.86Show/hide
Query:  FTGFCGSVFELEEKRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGE
        ++GF G+    +  R L     +L  WN+  F  + +      +     D I   +I WR+KA+VKW KEGD N+ F+       +NR  I  L  + G 
Subjt:  FTGFCGSVFELEEKRNLYSFNIRL-SWNQVDFDNVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKDSGE

Query:  VMRRDFKIEEEIISFFAKLY--PPGLLWKI-------------WIGALFQLVEDRYAEELGF
        V++    I EEI+ +F KLY  P G  W +             +  A+FQ   D + E+LGF
Subjt:  VMRRDFKIEEEIISFFAKLY--PPGLLWKI-------------WIGALFQLVEDRYAEELGF

A5BNF8 Uncharacterized protein3.1e-0836.84Show/hide
Query:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFD--NVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKD
        ++GF G+ +E  +  R L     +L  WN+  F   N +K   +   KR   + I  E+I WR+KA+VKW KEGD N+ FF       +NR  I  L  +
Subjt:  FTGFCGSVFELEE-KRNLYSFNIRL-SWNQVDFD--NVEKSLLKCKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNR--IDLLVKD

Query:  SGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI
         G V+    +I EEI+ +F KLY  P G  W I
Subjt:  SGEVMRRDFKIEEEIISFFAKLY--PPGLLWKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAAGAAGAAGACAAAGGGTTAGATTCACGAGATGTAATGTTGTTAGTCCAATATGCAAGAATACCATCAATGAAGAAGATAACTGAAAGTAGATGCGTGAAACA
TGGTGAGAAGAAGCGAAGTAGGTCCTTGGATGCACAAGATCAAGGTAGGTTGGAGTTAAAAAGTTGTCGTGCAAAATACATGTTTCTTTCAATTAGCGTGTTCACTGGTT
TTTGTGGTTCTGTTTTTGAGCTGGAGGAGAAAAGGAATCTCTACTCCTTTAACATTAGATTAAGCTGGAACCAGGTGGATTTTGATAATGTTGAAAAATCTTTGCTTAAA
TGCAAAAGTAAAAGGTTGCCGATGGATGGTATAAATTGTGAGGATATTAGTTGGAGGAAGAAGGCTAAGGTTAAGTGGGCTAAGGAAGGGGATGCCAATACTGTCTTTTT
CCAAAATTATCGGAGGAGATGTAAGAATCGTATTGATCTTTTGGTTAAAGACAGCGGAGAGGTTATGAGGAGGGATTTCAAGATAGAAGAGGAGATTATCTCTTTCTTCG
CCAAGCTATATCCCCCCGGCCTTTTGTGGAAGATTTGGATTGGTGCCCTATTTCAGTTAGTTGAAGATAGATATGCAGAAGAGCTTGGATTTGGGAGGGAACTTCTCTGT
TTTGGACAATGGAAGGCTGAGAGGCAAGATCTTTGCTTCAAGAGGGTGGTTGAGGGCTTCAAGGTTGACTATGATGATTCAAAGCTGCCGTTTTGGGTGTCTTTGGTTGG
GTATGGGGTGAGTCAATTTCCTTGCTCATACCATGGTCTCCCCTCGGGGGAAGGAATGGATGAAGGTGGTGAGGCTCATCTGGTTAGATGGGAAGTGGTGTCGAAGCCGA
AGGAGCTGGGGGAAGGGGGTCAAGTATTGGTAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAAGAAGAAGACAAAGGGTTAGATTCACGAGATGTAATGTTGTTAGTCCAATATGCAAGAATACCATCAATGAAGAAGATAACTGAAAGTAGATGCGTGAAACA
TGGTGAGAAGAAGCGAAGTAGGTCCTTGGATGCACAAGATCAAGGTAGGTTGGAGTTAAAAAGTTGTCGTGCAAAATACATGTTTCTTTCAATTAGCGTGTTCACTGGTT
TTTGTGGTTCTGTTTTTGAGCTGGAGGAGAAAAGGAATCTCTACTCCTTTAACATTAGATTAAGCTGGAACCAGGTGGATTTTGATAATGTTGAAAAATCTTTGCTTAAA
TGCAAAAGTAAAAGGTTGCCGATGGATGGTATAAATTGTGAGGATATTAGTTGGAGGAAGAAGGCTAAGGTTAAGTGGGCTAAGGAAGGGGATGCCAATACTGTCTTTTT
CCAAAATTATCGGAGGAGATGTAAGAATCGTATTGATCTTTTGGTTAAAGACAGCGGAGAGGTTATGAGGAGGGATTTCAAGATAGAAGAGGAGATTATCTCTTTCTTCG
CCAAGCTATATCCCCCCGGCCTTTTGTGGAAGATTTGGATTGGTGCCCTATTTCAGTTAGTTGAAGATAGATATGCAGAAGAGCTTGGATTTGGGAGGGAACTTCTCTGT
TTTGGACAATGGAAGGCTGAGAGGCAAGATCTTTGCTTCAAGAGGGTGGTTGAGGGCTTCAAGGTTGACTATGATGATTCAAAGCTGCCGTTTTGGGTGTCTTTGGTTGG
GTATGGGGTGAGTCAATTTCCTTGCTCATACCATGGTCTCCCCTCGGGGGAAGGAATGGATGAAGGTGGTGAGGCTCATCTGGTTAGATGGGAAGTGGTGTCGAAGCCGA
AGGAGCTGGGGGAAGGGGGTCAAGTATTGGTAACCTGA
Protein sequenceShow/hide protein sequence
MGEEEDKGLDSRDVMLLVQYARIPSMKKITESRCVKHGEKKRSRSLDAQDQGRLELKSCRAKYMFLSISVFTGFCGSVFELEEKRNLYSFNIRLSWNQVDFDNVEKSLLK
CKSKRLPMDGINCEDISWRKKAKVKWAKEGDANTVFFQNYRRRCKNRIDLLVKDSGEVMRRDFKIEEEIISFFAKLYPPGLLWKIWIGALFQLVEDRYAEELGFGRELLC
FGQWKAERQDLCFKRVVEGFKVDYDDSKLPFWVSLVGYGVSQFPCSYHGLPSGEGMDEGGEAHLVRWEVVSKPKELGEGGQVLVT