; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025233 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025233
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionincreased DNA methylation 3-like
Genome locationscaffold13:41648645..41652211
RNA-Seq ExpressionSpg025233
SyntenySpg025233
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144249.1 increased DNA methylation 3 [Cucumis sativus]3.1e-6993.75Show/hide
Query:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT
        MEG+GD T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+VQIEGVM+GPG LKESSA+YQMKVQQLCPPGPFT
Subjt:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]3.1e-6993.75Show/hide
Query:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT
        MEG+GD T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+VQIEGVM+GPG LKESSA+YQMKVQQLCPPGPFT
Subjt:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL

XP_022951227.1 increased DNA methylation 3-like [Cucurbita moschata]2.0e-7195.17Show/hide
Query:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP
        M MEGHGDH KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRV IEGVMTGPGLLK+SSA+YQMKVQQLCPPG 
Subjt:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS+PP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP

XP_023002579.1 increased DNA methylation 3-like [Cucurbita maxima]4.4e-7195.17Show/hide
Query:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP
        M MEGHGDH KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRV IEGVMTGPGLLK+SSA+YQMKVQQLCPPG 
Subjt:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS PP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP

XP_038884247.1 increased DNA methylation 3 [Benincasa hispida]2.4e-6993.75Show/hide
Query:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT
        MEGHGD T  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+VQIEGVMTGPG+LKESSA+YQMKVQQLCPPGPFT
Subjt:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL
        VSFKLPGPVDPRLS PSFRPDGILEVVVMKSRA PTVADS+PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein1.5e-6993.75Show/hide
Query:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT
        MEG+GD T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+VQIEGVM+GPG LKESSA+YQMKVQQLCPPGPFT
Subjt:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL

A0A1S3CMV5 increased DNA methylation 3 isoform X21.5e-6993.75Show/hide
Query:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT
        MEG+GD T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+VQIEGVM+GPG LKESSA+YQMKVQQLCPPGPFT
Subjt:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL

A0A5D3CM92 Increased DNA methylation 3 isoform X21.5e-6993.75Show/hide
Query:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT
        MEG+GD T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+VQIEGVM+GPG LKESSA+YQMKVQQLCPPGPFT
Subjt:  MEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL

A0A6J1GI33 increased DNA methylation 3-like9.5e-7295.17Show/hide
Query:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP
        M MEGHGDH KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRV IEGVMTGPGLLK+SSA+YQMKVQQLCPPG 
Subjt:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS+PP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP

A0A6J1KJX1 increased DNA methylation 3-like2.1e-7195.17Show/hide
Query:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP
        M MEGHGDH KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRV IEGVMTGPGLLK+SSA+YQMKVQQLCPPG 
Subjt:  MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS PP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPP

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.32.7e-2345.97Show/hide
Query:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEG-VMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP
        ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DG++ I+G   TG   + + + +++M  Q LCPPG FT++F+LP
Subjt:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEG-VMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        GPV     + +F  DG+LE VV K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

Q8RWL4 Increased DNA methylation 21.3e-2247.86Show/hide
Query:  EGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGV-MTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP
        E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +G+V + GV  TG   +K  S +++M+ + LCPPG F+VSF+LPGPV P   S +F  
Subjt:  EGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGV-MTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP

Query:  DGILEVVVMKSRAPPTV
        DGILE VVMK+    TV
Subjt:  DGILEVVVMKSRAPPTV

Q9SYQ0 Increased DNA methylation 33.5e-3152.85Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMT-GPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDG+V +EG  T G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMT-GPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein2.5e-3252.85Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMT-GPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDG+V +EG  T G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMT-GPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

AT1G54850.1 HSP20-like chaperones superfamily protein1.9e-2445.97Show/hide
Query:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEG-VMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP
        ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DG++ I+G   TG   + + + +++M  Q LCPPG FT++F+LP
Subjt:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEG-VMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        GPV     + +F  DG+LE VV K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.1 HSP20-like chaperones superfamily protein1.6e-3961.29Show/hide
Query:  HTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP
        H+K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GRV I+GV+    +  ++  LY+M+VQQLCPPGPF+++F LP
Subjt:  HTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein1.6e-3961.29Show/hide
Query:  HTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP
        H+K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GRV I+GV+    +  ++  LY+M+VQQLCPPGPF+++F LP
Subjt:  HTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein1.6e-3961.29Show/hide
Query:  HTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP
        H+K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GRV I+GV+    +  ++  LY+M+VQQLCPPGPF+++F LP
Subjt:  HTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGGAAGGCCATGGCGATCACACAAAACTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATCGG
TGTGAGCGAAGGTGCATACCTTTTTCGCGTTGCACTGCCTGGTGTACGGAAGGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAGGGTTCAGATTGAAGGAG
TGATGACAGGTCCAGGCCTTTTAAAAGAATCATCAGCTTTGTATCAGATGAAAGTGCAGCAACTGTGTCCTCCGGGACCTTTTACCGTTTCTTTTAAGCTGCCTGGACCA
GTTGATCCGCGGTTGTCTTCTCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCTACCCACCACTGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGACATGGAAGGCCATGGCGATCACACAAAACTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATCGG
TGTGAGCGAAGGTGCATACCTTTTTCGCGTTGCACTGCCTGGTGTACGGAAGGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAGGGTTCAGATTGAAGGAG
TGATGACAGGTCCAGGCCTTTTAAAAGAATCATCAGCTTTGTATCAGATGAAAGTGCAGCAACTGTGTCCTCCGGGACCTTTTACCGTTTCTTTTAAGCTGCCTGGACCA
GTTGATCCGCGGTTGTCTTCTCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCTACCCACCACTGTG
A
Protein sequenceShow/hide protein sequence
MDMEGHGDHTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVQIEGVMTGPGLLKESSALYQMKVQQLCPPGPFTVSFKLPGP
VDPRLSSPSFRPDGILEVVVMKSRAPPTVADSYPPL