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Spg025246 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025246
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncalmodulin-like
Genome locationscaffold13:39549947..39550216
RNA-Seq ExpressionSpg025246
SyntenySpg025246
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]5.8e-2668.13Show/hide
Query:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        MTR  YD K S +K+Q+E++K IFREHD +GDGRLS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQEL+KVVDYAIKCKYN++
Subjt:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3078.89Show/hide
Query:  MTRKY-DKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        M  KY  KNSS  + RE+IKAIF+EHD +GDGRLS+QELSRAFGMLGAFLPLYRAVRG LIAD + DG+ITE ELDKVVDYAIKCKYNII
Subjt:  MTRKY-DKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

KAG6585660.1 Calmodulin-like protein 5, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2878.31Show/hide
Query:  KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        K S+ +++RE+IKAIFREHD++GDGRLS+QELSRAFGM GAFLPLYRA R    ADA+ DGFITEQELDKVVDYAIKCKYNII
Subjt:  KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]2.6e-2668.13Show/hide
Query:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        MTR+ YD K S +K+Q+E++K +FREHD +GDGRLS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQELDKVVDYAIKCKYN++
Subjt:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

XP_022144349.1 calmodulin-like protein 5 [Momordica charantia]8.4e-2567.78Show/hide
Query:  MTRK-YDKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        MT K   K  S K+ RE++KAIFR HD++GDG LS++ELSRAFG LGA LPLYRAV G L ADAD DG IT++EL+KVVDYA+KCKY+II
Subjt:  MTRK-YDKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein1.3e-2668.13Show/hide
Query:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        MTR+ YD K S +K+Q+E++K +FREHD +GDGRLS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQELDKVVDYAIKCKYN++
Subjt:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

A0A0A0LRC1 Uncharacterized protein2.0e-1658.67Show/hide
Query:  KIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKY
        ++ REDIK IFREHD+DGDGRLS+ E+ +AFG  G+ LP Y+A  G   AD + DGFI E+ELDK+VDYA K ++
Subjt:  KIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKY

A0A5A7UY46 Putative calcium-binding protein CML102.8e-2668.13Show/hide
Query:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        MTR  YD K S +K+Q+E++K IFREHD +GDGRLS++ELSRAFG  GAF PLYRA  G  +AD D DGFI+EQEL+KVVDYAIKCKYN++
Subjt:  MTRK-YD-KNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

A0A5A7UYC0 Putative calcium-binding protein CML109.1e-1756.41Show/hide
Query:  SSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKY
        S  ++ REDIK IFREHD+DGDGRLS+ E+ +AFG  G+ LP Y+A  G   AD + DG+I E+ELDK+VDYA K ++
Subjt:  SSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKY

A0A6J1CS20 calmodulin-like protein 54.1e-2567.78Show/hide
Query:  MTRK-YDKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII
        MT K   K  S K+ RE++KAIFR HD++GDG LS++ELSRAFG LGA LPLYRAV G L ADAD DG IT++EL+KVVDYA+KCKY+II
Subjt:  MTRK-YDKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII

SwissProt top hitse value%identityAlignment
Q8RZB5 Probable calcium-binding protein CML108.5e-0441.38Show/hide
Query:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQE
        E+++ +FR+ D +GDGR+S  EL   F  LG         R    ADAD DGFI+  E
Subjt:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQE

Q9NZT1 Calmodulin-like protein 52.2e-0438.1Show/hide
Query:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV
        ED++  FR  D DGDG ++V EL RA   LG  LP          AD D+DG +  +E  +++
Subjt:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein5.1e-0436.21Show/hide
Query:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQE
        E++K +F + D +GDG++SV EL   F  +G         R     D DRDG+I   E
Subjt:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQE

AT1G18210.2 Calcium-binding EF-hand family protein5.1e-0436.21Show/hide
Query:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQE
        E++K +F + D +GDG++SV EL   F  +G         R     D DRDG+I   E
Subjt:  EDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQE

AT1G76650.1 calmodulin-like 381.3e-0429.58Show/hide
Query:  NSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV
        +S+ + +  +++A+F   D + DGR+S +EL ++F  LG  L    AV    ++D D DG +  +E  +++
Subjt:  NSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV

AT1G76650.3 calmodulin-like 381.3e-0429.58Show/hide
Query:  NSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV
        +S+ + +  +++A+F   D + DGR+S +EL ++F  LG  L    AV    ++D D DG +  +E  +++
Subjt:  NSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVV

AT3G50770.1 calmodulin-like 413.9e-0432.76Show/hide
Query:  SFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDG
        S +  +E+++ +F   D DGDG++S  EL   FG +G ++    A       D D DG
Subjt:  SFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGTAAATATGATAAGAACTCAAGTTTCAAGATACAAAGAGAGGACATAAAAGCAATCTTCAGGGAGCATGACCTAGATGGCGATGGGCGCCTGAGTGTCCAAGA
ATTGTCACGAGCATTCGGGATGCTGGGCGCATTTCTCCCTCTCTACCGTGCAGTCCGTGGCTTCCTCATTGCCGATGCCGATCGAGATGGATTTATTACCGAGCAAGAAC
TGGACAAGGTGGTGGATTATGCTATAAAATGTAAATATAACATAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCGTAAATATGATAAGAACTCAAGTTTCAAGATACAAAGAGAGGACATAAAAGCAATCTTCAGGGAGCATGACCTAGATGGCGATGGGCGCCTGAGTGTCCAAGA
ATTGTCACGAGCATTCGGGATGCTGGGCGCATTTCTCCCTCTCTACCGTGCAGTCCGTGGCTTCCTCATTGCCGATGCCGATCGAGATGGATTTATTACCGAGCAAGAAC
TGGACAAGGTGGTGGATTATGCTATAAAATGTAAATATAACATAATCTAG
Protein sequenceShow/hide protein sequence
MTRKYDKNSSFKIQREDIKAIFREHDLDGDGRLSVQELSRAFGMLGAFLPLYRAVRGFLIADADRDGFITEQELDKVVDYAIKCKYNII