; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025249 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025249
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold13:39623077..39625726
RNA-Seq ExpressionSpg025249
SyntenySpg025249
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150882.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]3.7e-12184.76Show/hide
Query:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNP-------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ
        MAVS SAATA      PSSSS        YTP FNP        PSRR+ +IA AQS+ RQTWLPGLDPP HLDG+LAGDFGFDPLGLGEDP SLKWYVQ
Subjt:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNP-------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL
        AELVH RFAMLGVSG+LLTDLLRVTGIS+LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A +GLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL

Query:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        NPLG+AKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022144175.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X1 [Momordica charantia]1.1e-12081.95Show/hide
Query:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK
        MAV SLSAAT  A   +P SS  SPS+I   F++PSF P+          SRR+I+A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGL EDP+SLK
Subjt:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLEP
        WYVQAEL+HSRFAMLG+SGILLTDLLRVTG+SK+PVWY AGA EYGFANKETLFIVQLLLMG    FVETKRYMDFKSPGSQAQEGTFFGLE+AL GLEP
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLEP

Query:  GYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022144176.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic isoform X2 [Momordica charantia]2.0e-12283.15Show/hide
Query:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK
        MAV SLSAAT  A   +P SS  SPS+I   F++PSF P+          SRR+I+A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGL EDP+SLK
Subjt:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        WYVQAEL+HSRFAMLG+SGILLTDLLRVTG+SK+PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AL GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022951251.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moschata]1.2e-11984.21Show/hide
Query:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNPK------PSRRSIIAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ
        MAVSLSAAT+   LP  S          FY+ S +PK      PSRR++ AQA  QSQPRQTWLPGLDPP HLDG+LAGDFGFDPLGLGEDP SLKW+VQ
Subjt:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNPK------PSRRSIIAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL
        AELVHSRFAMLGVSGILLTDLLRVTGIS+LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESA  GLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL

Query:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

XP_038886221.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida]7.9e-12487.31Show/hide
Query:  MAVSLSAATAR--AFLPQPSSSSPSSIPAPFYTPSFNP-------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWY
        MAVS+SAATAR  AF  QPSSSS S      YTPSFNP        PSRR+ +IAQAQS+ RQTWLPGLDPP HLDG+LAGDFGFDPLGLGEDP SLKWY
Subjt:  MAVSLSAATAR--AFLPQPSSSSPSSIPAPFYTPSFNP-------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWY

Query:  VQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGP
        VQAELVHSRFAMLGVSGILLTDLLRVTGIS+LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A  GLEPGYPGGP
Subjt:  VQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGP

Query:  LLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        LLNPLG+AKDIKNAH+WKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
Subjt:  LLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRB4 Chlorophyll a-b binding protein, chloroplastic1.8e-12184.76Show/hide
Query:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNP-------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ
        MAVS SAATA      PSSSS        YTP FNP        PSRR+ +IA AQS+ RQTWLPGLDPP HLDG+LAGDFGFDPLGLGEDP SLKWYVQ
Subjt:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNP-------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL
        AELVH RFAMLGVSG+LLTDLLRVTGIS+LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A +GLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL

Query:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        NPLG+AKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A5A7UY53 Chlorophyll a-b binding protein, chloroplastic2.9e-11982.96Show/hide
Query:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNP--------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYV
        MAVS+SAAT   F   PSSSS        +TP FNP         PSR S +IA AQS+ RQTWLPGLDPP +LDG+L GDFGFDPLGLGEDPDSLKWYV
Subjt:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNP--------KPSRRS-IIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYV

Query:  QAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPL
        QAELVH RFAMLGV+G+LLTDLLRVTGIS+LPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+A  GLEPGYPGGPL
Subjt:  QAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPL

Query:  LNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        LNPLG+AKD+KNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  LNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1CQX2 Chlorophyll a-b binding protein, chloroplastic5.2e-12181.95Show/hide
Query:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK
        MAV SLSAAT  A   +P SS  SPS+I   F++PSF P+          SRR+I+A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGL EDP+SLK
Subjt:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLEP
        WYVQAEL+HSRFAMLG+SGILLTDLLRVTG+SK+PVWY AGA EYGFANKETLFIVQLLLMG    FVETKRYMDFKSPGSQAQEGTFFGLE+AL GLEP
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMG----FVETKRYMDFKSPGSQAQEGTFFGLESALRGLEP

Query:  GYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1CSJ3 Chlorophyll a-b binding protein, chloroplastic9.5e-12383.15Show/hide
Query:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK
        MAV SLSAAT  A   +P SS  SPS+I   F++PSF P+          SRR+I+A+AQ+QPR+TWLPGLDPP HLDGSLAGDFGFDPLGL EDP+SLK
Subjt:  MAV-SLSAATARAFLPQPSSS--SPSSIPAPFYTPSFNPKP---------SRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLK

Query:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG
        WYVQAEL+HSRFAMLG+SGILLTDLLRVTG+SK+PVWY AGA EYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AL GLEPGYPG
Subjt:  WYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPG

Query:  GPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        GPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAM+GIFVQAYVTH GPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  GPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1GH16 Chlorophyll a-b binding protein, chloroplastic5.7e-12084.21Show/hide
Query:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNPK------PSRRSIIAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ
        MAVSLSAAT+   LP  S          FY+ S +PK      PSRR++ AQA  QSQPRQTWLPGLDPP HLDG+LAGDFGFDPLGLGEDP SLKW+VQ
Subjt:  MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNPK------PSRRSIIAQA--QSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL
        AELVHSRFAMLGVSGILLTDLLRVTGIS+LPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESA  GLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLL

Query:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  NPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic5.5e-5147.32Show/hide
Query:  PKPSRRSIIAQAQSQP-RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYG
        P  SR   ++   + P R  W PG  PP  LDGSL GDFGFDPLGLG DP+SLKW  QAELVHSR+AMLG +GI + + L   G+   P WY AG  EY 
Subjt:  PKPSRRSIIAQAQSQP-RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYG

Query:  FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTH
        F +  TLF+++L+L+G+ E +R+ D   PG    +  F    + L G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T 
Subjt:  FANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTH

Query:  TGPIDNLVEHLSNPWHKTIIQTLS
        TGPIDNL  HL++P H TI    S
Subjt:  TGPIDNLVEHLSNPWHKTIIQTLS

P27521 Chlorophyll a-b binding protein 4, chloroplastic2.0e-5352.22Show/hide
Query:  WLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET
        WLPGL  P +L GSLAGD GFDPLGL EDP++LKW+VQAELV+ R+AMLGV+G+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ
        +R+ D K+PGS  Q+  F   + +L   E GYPGG + NPL  A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+Q
Subjt:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ

Query:  TLS
        T +
Subjt:  TLS

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic7.5e-10182.38Show/hide
Query:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PP +LDG+LAGD+GFDPLGLGEDP+SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLE+AL GLEPGYPGGPLLNPLGLAKD++NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic1.5e-5351.71Show/hide
Query:  WLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET
        WLPGL  P +L GSL GD GFDPLGL EDP++L+W+VQAELV+ R+AMLGV+G+LL ++    GI  +P WY AG  EY FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ
        +R+ D K+PGS  Q+  F   + +L   E GYPGG + NPL  A  +    + K KEI NGRLAM+A LG  +Q  VT  GP DNL++H+S+PWH TI+Q
Subjt:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ

Query:  TLSSS
        TL  +
Subjt:  TLSSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic7.1e-5146.27Show/hide
Query:  MAVSLSAATARAFLPQPS--SSSPSSIPAPFYTPSFNPKPSRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHS
        MA SL A++A A +  PS        +      P+ + +P   S+ A A    R  W PG  PP  LDGSL GDFGFDPLGL  DPDSLKW VQAE+VH 
Subjt:  MAVSLSAATARAFLPQPS--SSSPSSIPAPFYTPSFNPKPSRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHS

Query:  RFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLA
        R+AMLG +GI + + L   GI   P WY AG  EY F +K TLF+V+L+L+G+ E +R+ D   PGS   +  F    + L G + GYPGG   +PLG  
Subjt:  RFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLA

Query:  K-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
                + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H TI
Subjt:  K-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 63.5e-4544.04Show/hide
Query:  SIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETL
        S + +     R  W PG  PP  LDGSL GDFGFDPLGLG DPD+LKW+ QAEL+HSR+AML V+GI++ + L   G  +   WY+AG+ EY FA+  TL
Subjt:  SIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETL

Query:  FIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNL
        F+ Q++LMG+ E +R+ D   PGS   E  +          + GYPGG   + +   +   +     + KEIKNGRLAM+A LG   QA  T   PI+NL
Subjt:  FIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAK-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNL

Query:  VEHLSNPWHKTIIQTLSS
        + HL++P H  +    +S
Subjt:  VEHLSNPWHKTIIQTLSS

AT1G45474.1 photosystem I light harvesting complex gene 55.3e-10282.38Show/hide
Query:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PP +LDG+LAGD+GFDPLGLGEDP+SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLE+AL GLEPGYPGGPLLNPLGLAKD++NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G45474.2 photosystem I light harvesting complex gene 55.3e-10282.38Show/hide
Query:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PP +LDG+LAGD+GFDPLGLGEDP+SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLE+AL GLEPGYPGGPLLNPLGLAKD++NAHDWKLKEIKNGRLAM+AMLG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.4e-5452.22Show/hide
Query:  WLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET
        WLPGL  P +L GSLAGD GFDPLGL EDP++LKW+VQAELV+ R+AMLGV+G+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ
        +R+ D K+PGS  Q+  F   + +L   E GYPGG + NPL  A       + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+Q
Subjt:  KRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQ

Query:  TLS
        T +
Subjt:  TLS

AT3G61470.1 photosystem I light harvesting complex gene 25.1e-5246.27Show/hide
Query:  MAVSLSAATARAFLPQPS--SSSPSSIPAPFYTPSFNPKPSRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHS
        MA SL A++A A +  PS        +      P+ + +P   S+ A A    R  W PG  PP  LDGSL GDFGFDPLGL  DPDSLKW VQAE+VH 
Subjt:  MAVSLSAATARAFLPQPS--SSSPSSIPAPFYTPSFNPKPSRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHS

Query:  RFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLA
        R+AMLG +GI + + L   GI   P WY AG  EY F +K TLF+V+L+L+G+ E +R+ D   PGS   +  F    + L G + GYPGG   +PLG  
Subjt:  RFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLA

Query:  K-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
                + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H TI
Subjt:  K-DIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCACTTTCAGCGGCCACTGCCAGAGCCTTCCTTCCGCAACCCTCTTCTTCATCTCCCTCCTCCATTCCCGCGCCCTTTTACACTCCCTCATTCAACCCTAA
ACCCTCCCGCCGCTCAATAATAGCTCAAGCCCAATCTCAGCCTCGCCAAACATGGCTCCCCGGCCTCGACCCTCCCCTGCATCTCGACGGAAGCCTCGCCGGCGATTTTG
GATTCGACCCACTTGGCCTCGGCGAAGACCCAGATAGTTTGAAGTGGTACGTCCAAGCAGAGCTCGTTCATTCTCGCTTCGCCATGCTCGGCGTCTCTGGAATTCTTCTC
ACAGATTTGCTTCGAGTGACAGGAATCAGTAAATTGCCTGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTTGCCAACAAAGAAACCCTCTTCATTGTTCAGCTGCT
GTTGATGGGCTTTGTGGAAACCAAAAGATATATGGATTTCAAGAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAATCCGCTCTCAGGGGTCTCGAGC
CCGGATATCCTGGGGGTCCTCTGCTGAATCCTCTTGGCCTGGCTAAAGATATCAAGAATGCACATGACTGGAAGCTCAAAGAGATTAAGAATGGACGGCTGGCGATGGTA
GCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACCCTCTC
GAGCTCAAGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCACTTTCAGCGGCCACTGCCAGAGCCTTCCTTCCGCAACCCTCTTCTTCATCTCCCTCCTCCATTCCCGCGCCCTTTTACACTCCCTCATTCAACCCTAA
ACCCTCCCGCCGCTCAATAATAGCTCAAGCCCAATCTCAGCCTCGCCAAACATGGCTCCCCGGCCTCGACCCTCCCCTGCATCTCGACGGAAGCCTCGCCGGCGATTTTG
GATTCGACCCACTTGGCCTCGGCGAAGACCCAGATAGTTTGAAGTGGTACGTCCAAGCAGAGCTCGTTCATTCTCGCTTCGCCATGCTCGGCGTCTCTGGAATTCTTCTC
ACAGATTTGCTTCGAGTGACAGGAATCAGTAAATTGCCTGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTTGCCAACAAAGAAACCCTCTTCATTGTTCAGCTGCT
GTTGATGGGCTTTGTGGAAACCAAAAGATATATGGATTTCAAGAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAATCCGCTCTCAGGGGTCTCGAGC
CCGGATATCCTGGGGGTCCTCTGCTGAATCCTCTTGGCCTGGCTAAAGATATCAAGAATGCACATGACTGGAAGCTCAAAGAGATTAAGAATGGACGGCTGGCGATGGTA
GCCATGCTTGGGATCTTTGTGCAAGCTTATGTTACTCATACAGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAAGACTATTATCCAGACCCTCTC
GAGCTCAAGTCCTTGA
Protein sequenceShow/hide protein sequence
MAVSLSAATARAFLPQPSSSSPSSIPAPFYTPSFNPKPSRRSIIAQAQSQPRQTWLPGLDPPLHLDGSLAGDFGFDPLGLGEDPDSLKWYVQAELVHSRFAMLGVSGILL
TDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLESALRGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMV
AMLGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP