; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025331 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025331
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpolyadenylate-binding protein RBP47-like
Genome locationscaffold13:39331122..39335575
RNA-Seq ExpressionSpg025331
SyntenySpg025331
Gene Ontology termsGO:0005829 - cytosol (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152729.1 polyadenylate-binding protein RBP47 [Cucumis sativus]1.1e-13681.53Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNGTVIGKQTVRLSWGRSP  KQYR DY NHWSGAYYGGQVYGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

XP_008444645.1 PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo]8.7e-13781.53Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNGTVIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

XP_022144139.1 polyadenylate-binding protein RBP47-like [Momordica charantia]1.4e-13982.48Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKY SVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAM EMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNG VIGKQTVRLSWGRSPA KQYRADYNNHW+G YYGGQVYGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

XP_023002570.1 polyadenylate-binding protein RBP47-like [Cucurbita maxima]1.6e-13078.41Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        ++SSIKVIRNKQTGISEGYGFVEF SHTTAEKVL NYST+LMPNTE TFRLNWAT STGDKRSE GSDLSIFVGDLAADVTDSIL ETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMT+MNGVYCSSRPMRIGAATPKKSSGYQ QYSSQGY SNGSFTHGHQSDGDSTNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYATAA
                                    NAEEALQKLNGT IGKQTVRLSWGRSPA KQ+RADY+N WSG AYYGGQ+YGGYGYA+PLPYDPPTMYA A+
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYATAA

Query:  YGAYPMYGTHQQQVN
        YGAYPMYGTHQQQV+
Subjt:  YGAYPMYGTHQQQVN

XP_038885237.1 polyadenylate-binding protein RBP47-like [Benincasa hispida]4.3e-13681.21Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNG VIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

TrEMBL top hitse value%identityAlignment
A0A0A0LP64 Uncharacterized protein5.5e-13781.53Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNGTVIGKQTVRLSWGRSP  KQYR DY NHWSGAYYGGQVYGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

A0A1S3BBK1 polyadenylate-binding protein RBP47-like4.2e-13781.53Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNGTVIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

A0A5A7V0L8 Polyadenylate-binding protein RBP47-like4.2e-13781.53Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISS+KVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYS+ILMPNTEQ FRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSF+HGHQSDGD TNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNGTVIGKQTVRLSWGRSP  KQYRADY NHWSGAYYGGQ+YGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

A0A6J1CRE8 polyadenylate-binding protein RBP47-like7.0e-14082.48Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        +ISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDS+LHETFASKY SVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAM EMNG+YCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY
                                    NAEEALQKLNG VIGKQTVRLSWGRSPA KQYRADYNNHW+G YYGGQVYGGYGYALPLPYDPPTMYA AAY
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAY

Query:  GAYPMYGTHQQQVN
        GAYPMYGTHQQQVN
Subjt:  GAYPMYGTHQQQVN

A0A6J1KPB2 polyadenylate-binding protein RBP47-like7.7e-13178.41Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        ++SSIKVIRNKQTGISEGYGFVEF SHTTAEKVL NYST+LMPNTE TFRLNWAT STGDKRSE GSDLSIFVGDLAADVTDSIL ETFASKYSSVKAAK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------
        VVYDPNTGCSKGYGFVRFGDDNERSQAMT+MNGVYCSSRPMRIGAATPKKSSGYQ QYSSQGY SNGSFTHGHQSDGDSTNTT                 
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT-----------------

Query:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYATAA
                                    NAEEALQKLNGT IGKQTVRLSWGRSPA KQ+RADY+N WSG AYYGGQ+YGGYGYA+PLPYDPPTMYA A+
Subjt:  ----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSG-AYYGGQVYGGYGYALPLPYDPPTMYATAA

Query:  YGAYPMYGTHQQQVN
        YGAYPMYGTHQQQV+
Subjt:  YGAYPMYGTHQQQVN

SwissProt top hitse value%identityAlignment
F4I3B3 Polyadenylate-binding protein RBP47A6.4e-7453.4Show/hide
Query:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKR-SENGSDLSIFVGDLAADVTDSILHETFAS
        H   ++  ++SS+KVIRNKQT  SEGYGFVEF S + AE+ LQ++S + MPN EQ FRLNWA+FSTG+KR SENG DLSIFVGDLA DV+D++L ETFA 
Subjt:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKR-SENGSDLSIFVGDLAADVTDSILHETFAS

Query:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFTHGHQSDGDSTNTT-------
        +Y SVK AKVV D NTG SKGYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ Y QQ  SQ    + G   +G  SDG+S N+T       
Subjt:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFTHGHQSDGDSTNTT-------

Query:  --------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYD
                                              +AEEA+  LNGTVIGK TVRLSWGRSP  KQ+R+D  N W+G Y  GQ Y   GYA      
Subjt:  --------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYD

Query:  PPTMYATAA
           MYATAA
Subjt:  PPTMYATAA

Q0WW84 Polyadenylate-binding protein RBP47B8.9e-7653.67Show/hide
Query:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRS-ENGSDLSIFVGDLAADVTDSILHETFAS
        H+  ++  ++SS+KVIRNK T  SEGYGFVEF S   AE+VLQNYS  +MPN++Q FR+NWA+FSTG+KR+ ENG DLS+FVGDL+ DVTD +LHETF+ 
Subjt:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRS-ENGSDLSIFVGDLAADVTDSILHETFAS

Query:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQSDGDSTNTT--
        +Y SVK+AKVV D NTG SKGYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATPK++   QQQ+SSQ      G+ SNGS  +G QSDG+STN T  
Subjt:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQSDGDSTNTT--

Query:  -------------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVY-GGYGYA
                                                   +AE+A++ LNGTVIGK TVRLSWGRSP  KQ+R D    W+G Y  G  Y  G GYA
Subjt:  -------------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVY-GGYGYA

Q9LEB3 Polyadenylate-binding protein RBP472.1e-8858.07Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
        ++ S+K+IRNKQTG SE YGFVEF +H  AEKVLQ+Y+  +MPNTEQ FRLNWA FSTG+KR+E GSD SIFVGDLA+DVTD++L +TFAS+Y S+K AK
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK

Query:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQSDGDSTNTT-----------
        VV D NTG SKGYGFVRFGD++ERS+AMTEMNGVYCSSR MRIG ATPKK S + +QYSSQ      GYASNG+ THG QSDGDS+NTT           
Subjt:  VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQSDGDSTNTT-----------

Query:  ----------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTM
                                          +A+EA+QKL+G +IGKQ VRLSWGRSPA KQ R D  + W+G Y G Q YGGYGY      D   M
Subjt:  ----------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTM

Query:  YAT-AAYGAYP-MYGTHQQQVN
        YAT AAYGA    YG HQQ V+
Subjt:  YAT-AAYGAYP-MYGTHQQQVN

Q9SX79 Polyadenylate-binding protein RBP47C1.3e-8758.1Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA
        +I S+KVIRNK  G+SEGYGFVEF SH  A+KVL+ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLSIFVGDL+ DV+D++LHETF+ KY SVKAA
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA

Query:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------
        KVV D NTG SKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  NG+ T   + +GD  NTT                
Subjt:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------

Query:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA
                                     NAEEAL+KLNGTVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Subjt:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA

Query:  YGAYPMYGTHQQQVN
        Y  YPMYG HQQQV+
Subjt:  YGAYPMYGTHQQQVN

Q9SX80 Polyadenylate-binding protein RBP47C'1.2e-8859.05Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA
        +I S+KVIRNK  G SEGYGFVEF SH  A+KVLQ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLSIFVGDLA DV+D++LHETF+ KY SVKAA
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA

Query:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------
        KVV D NTG SKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  +G+FT   +S+GD+ NTT                
Subjt:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------

Query:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA
                                     NAEEAL+KLNGTVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Subjt:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA

Query:  YGAYPMYGTHQQQVN
        Y  YPMYG HQQQV+
Subjt:  YGAYPMYGTHQQQVN

Arabidopsis top hitse value%identityAlignment
AT1G47490.1 RNA-binding protein 47C9.4e-8958.1Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA
        +I S+KVIRNK  G+SEGYGFVEF SH  A+KVL+ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLSIFVGDL+ DV+D++LHETF+ KY SVKAA
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA

Query:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------
        KVV D NTG SKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  NG+ T   + +GD  NTT                
Subjt:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------

Query:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA
                                     NAEEAL+KLNGTVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Subjt:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA

Query:  YGAYPMYGTHQQQVN
        Y  YPMYG HQQQV+
Subjt:  YGAYPMYGTHQQQVN

AT1G47490.2 RNA-binding protein 47C3.4e-6267.39Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA
        +I S+KVIRNK  G+SEGYGFVEF SH  A+KVL+ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLSIFVGDL+ DV+D++LHETF+ KY SVKAA
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA

Query:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT
        KVV D NTG SKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  NG+ T   + +GD  NTT
Subjt:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT

AT1G47500.1 RNA-binding protein 47C'8.5e-9059.05Show/hide
Query:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA
        +I S+KVIRNK  G SEGYGFVEF SH  A+KVLQ ++   MPNT+Q FRLNWA+FSTG+KR E NG DLSIFVGDLA DV+D++LHETF+ KY SVKAA
Subjt:  QISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSE-NGSDLSIFVGDLAADVTDSILHETFASKYSSVKAA

Query:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------
        KVV D NTG SKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+K++GYQQQ    GY  +G+FT   +S+GD+ NTT                
Subjt:  KVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTT----------------

Query:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA
                                     NAEEAL+KLNGTVIGKQTVRLSWGR+PA KQ R  Y N W   YYGGQ Y GYGY +P P   P MY  A 
Subjt:  -----------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAA

Query:  YGAYPMYGTHQQQVN
        Y  YPMYG HQQQV+
Subjt:  YGAYPMYGTHQQQVN

AT1G49600.1 RNA-binding protein 47A4.6e-7553.4Show/hide
Query:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKR-SENGSDLSIFVGDLAADVTDSILHETFAS
        H   ++  ++SS+KVIRNKQT  SEGYGFVEF S + AE+ LQ++S + MPN EQ FRLNWA+FSTG+KR SENG DLSIFVGDLA DV+D++L ETFA 
Subjt:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKR-SENGSDLSIFVGDLAADVTDSILHETFAS

Query:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFTHGHQSDGDSTNTT-------
        +Y SVK AKVV D NTG SKGYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ Y QQ  SQ    + G   +G  SDG+S N+T       
Subjt:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYA-SNGSFTHGHQSDGDSTNTT-------

Query:  --------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYD
                                              +AEEA+  LNGTVIGK TVRLSWGRSP  KQ+R+D  N W+G Y  GQ Y   GYA      
Subjt:  --------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYD

Query:  PPTMYATAA
           MYATAA
Subjt:  PPTMYATAA

AT3G19130.1 RNA-binding protein 47B6.4e-7753.67Show/hide
Query:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRS-ENGSDLSIFVGDLAADVTDSILHETFAS
        H+  ++  ++SS+KVIRNK T  SEGYGFVEF S   AE+VLQNYS  +MPN++Q FR+NWA+FSTG+KR+ ENG DLS+FVGDL+ DVTD +LHETF+ 
Subjt:  HALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRS-ENGSDLSIFVGDLAADVTDSILHETFAS

Query:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQSDGDSTNTT--
        +Y SVK+AKVV D NTG SKGYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATPK++   QQQ+SSQ      G+ SNGS  +G QSDG+STN T  
Subjt:  KYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQ------GYASNGSFTHGHQSDGDSTNTT--

Query:  -------------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVY-GGYGYA
                                                   +AE+A++ LNGTVIGK TVRLSWGRSP  KQ+R D    W+G Y  G  Y  G GYA
Subjt:  -------------------------------------------NAEEALQKLNGTVIGKQTVRLSWGRSPAIKQYRADYNNHWSGAYYGGQVY-GGYGYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCATGCTTTACGTAACTATTACATGCAGATTTCTTCCATTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCA
TACAACAGCAGAGAAAGTTCTGCAGAACTATTCTACAATTTTGATGCCTAATACTGAGCAAACTTTCCGGCTAAACTGGGCAACATTTAGCACTGGTGACAAGCGTTCAG
AAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCAGATGTTACTGATAGTATACTGCATGAAACTTTTGCTAGTAAATACTCATCTGTCAAAGCAGCTAAA
GTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTGAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCGTGTATTGCTC
AAGTAGGCCTATGCGTATTGGTGCAGCGACACCCAAAAAATCCTCTGGATATCAGCAGCAATATTCTTCACAAGGATATGCATCAAATGGTTCATTCACCCATGGACACC
AGTCTGATGGAGATTCTACAAATACAACAAATGCTGAAGAGGCATTGCAGAAATTAAATGGAACTGTGATTGGCAAGCAAACAGTACGTCTTTCTTGGGGACGAAGTCCG
GCAATTAAGCAGTACCGGGCTGATTATAACAATCACTGGAGTGGAGCCTACTATGGAGGGCAGGTCTATGGTGGATATGGATATGCACTGCCGCTACCTTACGACCCACC
AACCATGTATGCTACAGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCATGCTTTACGTAACTATTACATGCAGATTTCTTCCATTAAAGTCATTCGTAATAAGCAAACTGGTATATCAGAAGGCTATGGATTTGTAGAATTTTTCTCTCA
TACAACAGCAGAGAAAGTTCTGCAGAACTATTCTACAATTTTGATGCCTAATACTGAGCAAACTTTCCGGCTAAACTGGGCAACATTTAGCACTGGTGACAAGCGTTCAG
AAAATGGTTCTGATCTTTCTATTTTTGTAGGAGATTTAGCAGCAGATGTTACTGATAGTATACTGCATGAAACTTTTGCTAGTAAATACTCATCTGTCAAAGCAGCTAAA
GTTGTCTATGATCCAAATACTGGTTGTTCAAAAGGTTATGGTTTTGTGAGGTTTGGTGATGATAATGAGAGGTCTCAGGCCATGACTGAAATGAATGGCGTGTATTGCTC
AAGTAGGCCTATGCGTATTGGTGCAGCGACACCCAAAAAATCCTCTGGATATCAGCAGCAATATTCTTCACAAGGATATGCATCAAATGGTTCATTCACCCATGGACACC
AGTCTGATGGAGATTCTACAAATACAACAAATGCTGAAGAGGCATTGCAGAAATTAAATGGAACTGTGATTGGCAAGCAAACAGTACGTCTTTCTTGGGGACGAAGTCCG
GCAATTAAGCAGTACCGGGCTGATTATAACAATCACTGGAGTGGAGCCTACTATGGAGGGCAGGTCTATGGTGGATATGGATATGCACTGCCGCTACCTTACGACCCACC
AACCATGTATGCTACAGCAGCATATGGAGCTTACCCTATGTATGGCACCCATCAACAGCAAGTGAACTGA
Protein sequenceShow/hide protein sequence
MSHALRNYYMQISSIKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSTILMPNTEQTFRLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSILHETFASKYSSVKAAK
VVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGYQQQYSSQGYASNGSFTHGHQSDGDSTNTTNAEEALQKLNGTVIGKQTVRLSWGRSP
AIKQYRADYNNHWSGAYYGGQVYGGYGYALPLPYDPPTMYATAAYGAYPMYGTHQQQVN