; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025348 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025348
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:40067235..40069082
RNA-Seq ExpressionSpg025348
SyntenySpg025348
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060932.1 hypothetical protein E6C27_scaffold501G00650 [Cucumis melo var. makuwa]3.8e-0452.78Show/hide
Query:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
        LTAV  L LLLLIS  S       VV LKK      PS  +  H ++ R   +V  SSKRKVPNASDPLHNR
Subjt:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
TrEMBL top hitse value%identityAlignment
A0A5A7UYF8 Uncharacterized protein1.8e-0452.78Show/hide
Query:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
        LTAV  L LLLLIS  S       VV LKK      PS  +  H ++ R   +V  SSKRKVPNASDPLHNR
Subjt:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
A0A6N2N0D3 Uncharacterized protein7.0e-0448.1Show/hide
Query:  SMRLFKLRLTAVALLLLLLLISGDSTNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
        S+++F L+   V L LL+LL+SGD    E  +V+++ L++   PS    + +QQ +SF  +F SSKRKVPNASDPLHNR
Subjt:  SMRLFKLRLTAVALLLLLLLISGDSTNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTCCAACATGACTTCGTTTTCAAGGCTCACAACTTCTTTGTTCGGCTCCCGAGGAATTTACGAAACAGCTACGTCAGGGGCATGGCTCTGATACTGGCTCACAA
CTTCTTTGTTCGGCTCCCGAGGAATTTACGAAACAGCTACGTCAGGGGCATGGCTCTGATACCGCTTGTAAGGGACAACCGGACACACACATATCTCCACAATGATACCC
ATTTCATTTCTCTGTCCATGCGGTTGTTCAAGCTGCGGTTAACTGCGGTGGCTTTGCTGCTGCTGCTGCTTCTGATCTCAGGCGACAGTACTAATGGAGAAGCCAAAGTT
GTTGATCTGAAGAAGCTTAAAGAAGCAACAGCTCCAAGTCATGAGAAAGACAGCCACAGACAACAGACGAGGTCATTCCATCATGTTTTCATGTCCAGTAAGAGGAAGGT
TCCAAATGCTTCAGATCCGCTCCACAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTCCAACATGACTTCGTTTTCAAGGCTCACAACTTCTTTGTTCGGCTCCCGAGGAATTTACGAAACAGCTACGTCAGGGGCATGGCTCTGATACTGGCTCACAA
CTTCTTTGTTCGGCTCCCGAGGAATTTACGAAACAGCTACGTCAGGGGCATGGCTCTGATACCGCTTGTAAGGGACAACCGGACACACACATATCTCCACAATGATACCC
ATTTCATTTCTCTGTCCATGCGGTTGTTCAAGCTGCGGTTAACTGCGGTGGCTTTGCTGCTGCTGCTGCTTCTGATCTCAGGCGACAGTACTAATGGAGAAGCCAAAGTT
GTTGATCTGAAGAAGCTTAAAGAAGCAACAGCTCCAAGTCATGAGAAAGACAGCCACAGACAACAGACGAGGTCATTCCATCATGTTTTCATGTCCAGTAAGAGGAAGGT
TCCAAATGCTTCAGATCCGCTCCACAATCGTTGA
Protein sequenceShow/hide protein sequence
MDLQHDFVFKAHNFFVRLPRNLRNSYVRGMALILAHNFFVRLPRNLRNSYVRGMALIPLVRDNRTHTYLHNDTHFISLSMRLFKLRLTAVALLLLLLLISGDSTNGEAKV
VDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR