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Spg025352 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025352
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncalmodulin-like
Genome locationscaffold13:39469859..39470341
RNA-Seq ExpressionSpg025352
SyntenySpg025352
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951879.1 calmodulin-like [Cucurbita moschata]1.3e-3959.12Show/hide
Query:  HPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGC
        H  H  G   + EA ++++ YDKN DS L+K EL+  I    +++ G H     K DV  K  K PA  K  EEKG+ M+LSRSQIKEIF EHDIDGDG 
Subjt:  HPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGC

Query:  LNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF
        L++SE+TKAFSF GS++P +KAHYGL+YAD DGDGLISEEELEKL+DYAER +KKK GF
Subjt:  LNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF

XP_022951880.1 calmodulin-like [Cucurbita moschata]8.2e-4764.56Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        MS +  H  H +    + +AN +I+KYDKNGDS+LTK+ELT +I+EQ+SQ +GP K D+VCKP K PA  K  E+KG  MRLSRS+I++IF EHDIDGDG
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG
         LN+SE+TKAFSF GS++P +KAHYGL+YAD DGDG ISEEELEKL+DYAERVS++KG
Subjt:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG

XP_023002888.1 calmodulin-like [Cucurbita maxima]1.7e-3958.18Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHD
        MS  S      Q    + EA + I+ YDKN DS L+K EL+  I    +++ G H     K DV  K  K PA  K  EEKG+ M+LSRSQIKEIF EHD
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHD

Query:  IDGDGCLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF
        IDGDG L++SE+TKAFSF GS++P +KAHYGL+YAD DGDGLISEEELEKL+DYAER +KKK GF
Subjt:  IDGDGCLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]4.1e-4664.56Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        MS +  H  H Q    + +AN +I+KYDKNGDS+LTK+ELT +I+EQ+SQ +G H  DVVCKP K PA  K  E+KG  MRLSRS+I++IF EHDIDGDG
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG
         LN+SE+TKAFSF GS++P +KAHYGL+YAD DGDG ISEEEL KL+DYAERVS++KG
Subjt:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG

XP_023537874.1 probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]1.5e-4569.29Show/hide
Query:  EANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEMTKAFSFCGSVV
        +AN +I+KYDKNGDS+LTK+ELT +I+EQ+SQ +GP K D+VCKP K PA  K  E+KG  MRLSRS+I++IF EHDIDGDG LN+SE+TKAFSF GS++
Subjt:  EANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEMTKAFSFCGSVV

Query:  PFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG
        P +KAHYGL+YAD DGDG ISEEEL KL+DYAERVS++KG
Subjt:  PFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG

TrEMBL top hitse value%identityAlignment
A0A6J1CSH1 probable calcium-binding protein CML153.7e-3756.05Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        MS+ S     GQ    + EA++MI+KYDKNGDS++TK E+    +         HK +VV K  K PA+    E+K  K++ SRSQIKEIF EHDIDGDG
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKK
        CL++SE+ KAFSF GSV+P +KAHYGL++AD+DGDGLISEEEL+KL+DYAE+ S +K
Subjt:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKK

A0A6J1GK16 calmodulin-like6.1e-4059.12Show/hide
Query:  HPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGC
        H  H  G   + EA ++++ YDKN DS L+K EL+  I    +++ G H     K DV  K  K PA  K  EEKG+ M+LSRSQIKEIF EHDIDGDG 
Subjt:  HPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGC

Query:  LNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF
        L++SE+TKAFSF GS++P +KAHYGL+YAD DGDGLISEEELEKL+DYAER +KKK GF
Subjt:  LNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF

A0A6J1GK54 calmodulin-like4.0e-4764.56Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        MS +  H  H +    + +AN +I+KYDKNGDS+LTK+ELT +I+EQ+SQ +GP K D+VCKP K PA  K  E+KG  MRLSRS+I++IF EHDIDGDG
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG
         LN+SE+TKAFSF GS++P +KAHYGL+YAD DGDG ISEEELEKL+DYAERVS++KG
Subjt:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG

A0A6J1KRR4 calmodulin-A-like2.0e-4664.56Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG
        MS +  H  H Q    + +AN +I+KYDKNGDS+LTK+ELT +I+EQ+SQ +G H  DVVCKP K PA  K  E+KG  MRLSRS+I++IF EHDIDGDG
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDG

Query:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG
         LN+SE+TKAFSF GS++P +KAHYGL+YAD DGDG ISEEEL KL+DYAERVS++KG
Subjt:  CLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKG

A0A6J1KUW2 calmodulin-like8.0e-4058.18Show/hide
Query:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHD
        MS  S      Q    + EA + I+ YDKN DS L+K EL+  I    +++ G H     K DV  K  K PA  K  EEKG+ M+LSRSQIKEIF EHD
Subjt:  MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPH-----KDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHD

Query:  IDGDGCLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF
        IDGDG L++SE+TKAFSF GS++P +KAHYGL+YAD DGDGLISEEELEKL+DYAER +KKK GF
Subjt:  IDGDGCLNMSEMTKAFSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCCCATTCTCATCATCCTCAGCATGGCCAAGGCCAAGCTTACAAAGACGAAGCAAATCAGATGATCGAGAAATACGACAAGAATGGCGATTCAGTCCTCACCAA
GAACGAGCTAACCACTTTGATCATGGAACAATCATCTCAACACCGAGGACCTCATAAGGACGACGTCGTCTGCAAACCTCATAAAGCGCCCGCTAAGCCTAAGCCTAAGG
AAGAGAAGGGTTCAAAGATGAGGCTGAGTCGCAGCCAGATCAAGGAGATCTTCGAAGAGCACGATATCGACGGCGATGGTTGTCTCAACATGAGTGAGATGACAAAGGCC
TTCAGCTTCTGTGGTTCAGTGGTTCCGTTCCACAAAGCTCACTATGGTCTATCTTATGCGGACGAGGATGGAGATGGTCTTATCAGCGAGGAAGAGCTTGAAAAACTCAT
TGATTATGCTGAGAGAGTGAGCAAAAAGAAAGGAGGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCCCATTCTCATCATCCTCAGCATGGCCAAGGCCAAGCTTACAAAGACGAAGCAAATCAGATGATCGAGAAATACGACAAGAATGGCGATTCAGTCCTCACCAA
GAACGAGCTAACCACTTTGATCATGGAACAATCATCTCAACACCGAGGACCTCATAAGGACGACGTCGTCTGCAAACCTCATAAAGCGCCCGCTAAGCCTAAGCCTAAGG
AAGAGAAGGGTTCAAAGATGAGGCTGAGTCGCAGCCAGATCAAGGAGATCTTCGAAGAGCACGATATCGACGGCGATGGTTGTCTCAACATGAGTGAGATGACAAAGGCC
TTCAGCTTCTGTGGTTCAGTGGTTCCGTTCCACAAAGCTCACTATGGTCTATCTTATGCGGACGAGGATGGAGATGGTCTTATCAGCGAGGAAGAGCTTGAAAAACTCAT
TGATTATGCTGAGAGAGTGAGCAAAAAGAAAGGAGGTTTTTAA
Protein sequenceShow/hide protein sequence
MSAHSHHPQHGQGQAYKDEANQMIEKYDKNGDSVLTKNELTTLIMEQSSQHRGPHKDDVVCKPHKAPAKPKPKEEKGSKMRLSRSQIKEIFEEHDIDGDGCLNMSEMTKA
FSFCGSVVPFHKAHYGLSYADEDGDGLISEEELEKLIDYAERVSKKKGGF