CuGenDBv2

Gene ID	Spg025375
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CX9C domain-containing protein
Genome location	scaffold13:41313689..41316235
RNA-Seq Expression	Spg025375
Synteny	Spg025375
Gene Ontology terms	GO:0032543 - mitochondrial translation (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR009069 - Cysteine alpha-hairpin motif superfamily IPR017264 - Ribosomal protein MRP10, mitochondrial IPR031731 - IMS import disulfide relay-system, CHCH-CHCH-like Cx9C

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647215.1 hypothetical protein Csa_018966 [Cucumis sativus]

7.5e-35

84.52

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Query:  LSVSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        +SV+MGRKAG+L+INPKKFG L+KPCMKEM+SFLNCIALNQNND+KCTRHKELLNTCMDAQ+ R++KPWGSINY LQRLNRGRK
Subjt:  LSVSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

XP_022157440.1 uncharacterized protein LOC111024138 [Momordica charantia]

1.4e-36

96.25

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTR+KELLNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

XP_022157885.1 uncharacterized protein LOC111024495 isoform X1 [Momordica charantia]

6.2e-37

95.12

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Query:  VSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        V MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTR+KELLNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  VSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

XP_022946561.1 uncharacterized protein LOC111450585 [Cucurbita moschata]

8.9e-36

92.5

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTRHKE+LNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

XP_022999786.1 uncharacterized protein LOC111494031 [Cucurbita maxima]

5.2e-36

93.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTRHKELLNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TA50 CX9C domain-containing protein

6.2e-35

87.5

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAG+L+INPKKFG LSKPCMKEM+SFLNC++LNQNND+KCTRHKELLNTCMDAQ+NRN+KPWGSINYQLQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

A0A6J1DU96 uncharacterized protein LOC111024495 isoform X1

3.0e-37

95.12

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Query:  VSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        V MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTR+KELLNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  VSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

A0A6J1DVQ0 uncharacterized protein LOC111024138

6.6e-37

96.25

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTR+KELLNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

A0A6J1G420 uncharacterized protein LOC111450585

4.3e-36

92.5

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTRHKE+LNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

A0A6J1KBS0 uncharacterized protein LOC111494031

2.5e-36

93.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTRHKELLNTCMDAQSNRNRKPWGSINY LQRL+RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G47278.1 unknown protein

5.6e-28

68.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAG LYINPKK G L+KPCMKEM+SFLNC+ALN   DDKC + K+LL+ CM  QS+   K WG+INY LQRL RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

AT1G47278.2 unknown protein

5.6e-28

68.75

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Query:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK
        MGRKAG LYINPKK G L+KPCMKEM+SFLNC+ALN   DDKC + K+LL+ CM  QS+   K WG+INY LQRL RGRK
Subjt:  MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

Sequences

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CDS sequence

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ATGAGGTCTTGGGTAAACGGCCAAGGATCACCATGCTTGAAAAGGGGTGTTGTAATAGTTTTGATAGAGTTCGATATGGTTGGAAGTTATGAGATTGAAATTGCTAAAGG
TGGATTTTGCGAGCATCCACCCTGTGTACGGTGTTGGTGCATGGTTCCTCTAGTGGGGGCTAAGTACGGGCTCAGTTTGTCTTACATTGTTATTGCTTATTGGTCTTTTG
CTATTTCTAAGGAGTTGGAACATGGGAATTTGTCTGTATCAATGGGTAGGAAAGCTGGTACTTTATATATCAACCCAAAGAAGTTTGGCACTCTTAGCAAACCTTGCATG
AAGGAAATGATATCATTTCTCAATTGCATAGCTCTTAACCAAAACAATGATGATAAGTGCACCAGACATAAGGAACTTCTAAATACTTGCATGGATGCTCAGTCCAACAG
AAACAGGAAACCTTGGGGTAGCATCAATTACCAGTTGCAGAGGCTTAACAGAGGAAGAAAGTAG

mRNA sequence

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Protein sequence

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MRSWVNGQGSPCLKRGVVIVLIEFDMVGSYEIEIAKGGFCEHPPCVRCWCMVPLVGAKYGLSLSYIVIAYWSFAISKELEHGNLSVSMGRKAGTLYINPKKFGTLSKPCM
KEMISFLNCIALNQNNDDKCTRHKELLNTCMDAQSNRNRKPWGSINYQLQRLNRGRK

Spg025375 (gene) of Sponge gourd (cylindrica) v1 genome