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Spg025404 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025404
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncentromere protein V-like
Genome locationscaffold13:41802990..41803409
RNA-Seq ExpressionSpg025404
SyntenySpg025404
Gene Ontology termsGO:0016846 - carbon-sulfur lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006913 - CENP-V/GFA domain
IPR011057 - Mss4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599075.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. sororia]9.9e-7392.59Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCK +RW+VEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV

KAG7030011.1 Centromere protein V, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-7392.59Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCK +RW+VEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV

XP_022946627.1 centromere protein V-like [Cucurbita moschata]9.9e-7392.59Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCK +RW+VEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV

XP_023546052.1 centromere protein V [Cucurbita pepo subsp. pepo]2.6e-7393.33Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELV HNGGCHCKK+RW+VEAPASVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV

XP_038884393.1 centromere protein V [Benincasa hispida]1.2e-7594.2Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKK+RWQVEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NFISTYTFG+HTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENT
        CVDPGTLTHVEIR+FDG NWEASYDHTGIASFSK ENT
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENT

TrEMBL top hitse value%identityAlignment
A0A1S3CNW6 centromere protein V isoform X41.1e-7289.21Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKK+RW+VEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENTS
        CVDPGTLTHVE+RQFDG NWEASYDHTGIASFSK+   S
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENTS

A0A1S4E4W3 centromere protein V isoform X61.4e-7290.65Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKK+RW+VEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENTS
        CVDPGTLTHVE+RQFDG NWEASYDHTGIASFSK+ NTS
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENTS

A0A5D3CJK9 Centromere protein V isoform X11.4e-7290.65Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKK+RW+VEAPASVVAWDCNCS+CFMRANTHFIVP ERFKLLGDS NF+STYTFG+HTAKHTFCK CGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENTS
        CVDPGTLTHVE+RQFDG NWEASYDHTGIASFSK+ NTS
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKVENTS

A0A6J1G4E1 centromere protein V-like4.8e-7392.59Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCK +RW+VEAP SVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV
        CVDPGTLTHVEIRQFDG NWEASY HTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV

A0A6J1KE30 centromere protein V-like8.2e-7392.59Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SELVVHNGGCHCKK+RW+VEAPASVVAWDCNCSDCFMRANTHFIVP ERFKLLGDS+NFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV
        CVDPGTL +VEIRQFDG NWEASY HTGIASFSK+
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSKV

SwissProt top hitse value%identityAlignment
A0A0U1RR11 Centromere protein V-like protein 11.1e-2140.16Show/hide
Query:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  +R+ V APA +   DC+C  C  + + HF+VP+ RF LL  +E+ + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRN--WEASYDHTGI
        GT+  V I +  G +   EA+ +H  I
Subjt:  GTLTHVEIRQFDGRN--WEASYDHTGI

A0A0U1RRI6 Centromere protein V-like protein 31.1e-2140.16Show/hide
Query:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  +R+ V APA +   DC+C  C  + + HF+VP+ RF LL  +E+ + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRN--WEASYDHTGI
        GT+  V I +  G +   EA+ +H  I
Subjt:  GTLTHVEIRQFDGRN--WEASYDHTGI

P0DPI3 Centromere protein V-like protein 21.1e-2140.16Show/hide
Query:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  +R+ V APA +   DC+C  C  + + HF+VP+ RF LL  +E+ + TY   TH A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRN--WEASYDHTGI
        GT+  V I +  G +   EA+ +H  I
Subjt:  GTLTHVEIRQFDGRN--WEASYDHTGI

Q7Z7K6 Centromere protein V1.9e-3451.91Show/hide
Query:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  +R++V A A +  +DCNCS C  + N HFIVP+ RFKLL  +E+ I+TYTF TH A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRNWE-ASYDHTGIASFSK
        GT+  +   +F+G +WE A  +H  I + SK
Subjt:  GTLTHVEIRQFDGRNWE-ASYDHTGIASFSK

Q9CXS4 Centromere protein V8.5e-3552.67Show/hide
Query:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  +R++V A A +  +DCNCS C  + N HFIVP+ RFKLL  +E+ I+TYTF TH A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEIRQFDGRNWE-ASYDHTGIASFSK
        GT+  V   +F+G +WE A  +H  I + SK
Subjt:  GTLTHVEIRQFDGRNWE-ASYDHTGIASFSK

Arabidopsis top hitse value%identityAlignment
AT5G16940.1 carbon-sulfur lyases7.8e-6071.64Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC KI+W+V+A  SV+AW CNCSDC MR N HFIVPS  F+LL DS++FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSK
        CV  GTL H+E++ +DG+NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSK

AT5G16940.2 carbon-sulfur lyases7.8e-6071.64Show/hide
Query:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC KI+W+V+A  SV+AW CNCSDC MR N HFIVPS  F+LL DS++FI+TYTFGTHTAKHTFCKVCGITSFY PRSNPDGVA+T K
Subjt:  MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSK
        CV  GTL H+E++ +DG+NWE S+  TGIASFSK
Subjt:  CVDPGTLTHVEIRQFDGRNWEASYDHTGIASFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGAGCTGGTTGTGCATAACGGTGGATGTCACTGCAAGAAAATAAGATGGCAGGTAGAAGCACCTGCCAGTGTTGTAGCTTGGGATTGCAACTGTTCTGATTG
CTTCATGAGGGCCAATACACATTTTATCGTACCTTCGGAACGATTCAAACTTTTAGGAGATTCTGAGAACTTTATTTCAACCTACACCTTTGGTACTCACACTGCAAAAC
ATACCTTTTGCAAAGTTTGTGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCAATTACTTTCAAATGTGTTGATCCTGGAACATTGACCCATGTT
GAAATTAGGCAGTTTGATGGGAGAAACTGGGAGGCCTCTTATGATCACACTGGCATTGCTTCATTCTCAAAGGTTGAGAACACAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTGAGCTGGTTGTGCATAACGGTGGATGTCACTGCAAGAAAATAAGATGGCAGGTAGAAGCACCTGCCAGTGTTGTAGCTTGGGATTGCAACTGTTCTGATTG
CTTCATGAGGGCCAATACACATTTTATCGTACCTTCGGAACGATTCAAACTTTTAGGAGATTCTGAGAACTTTATTTCAACCTACACCTTTGGTACTCACACTGCAAAAC
ATACCTTTTGCAAAGTTTGTGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCAATTACTTTCAAATGTGTTGATCCTGGAACATTGACCCATGTT
GAAATTAGGCAGTTTGATGGGAGAAACTGGGAGGCCTCTTATGATCACACTGGCATTGCTTCATTCTCAAAGGTTGAGAACACAAGTTAA
Protein sequenceShow/hide protein sequence
MASELVVHNGGCHCKKIRWQVEAPASVVAWDCNCSDCFMRANTHFIVPSERFKLLGDSENFISTYTFGTHTAKHTFCKVCGITSFYHPRSNPDGVAITFKCVDPGTLTHV
EIRQFDGRNWEASYDHTGIASFSKVENTS