; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025422 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025422
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:42124804..42125873
RNA-Seq ExpressionSpg025422
SyntenySpg025422
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]2.5e-0453.33Show/hide
Query:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        FW+EL DL G   D+W  GGDFN+ R S EKS++  + +SMR FN
Subjt:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

KAE8647279.1 hypothetical protein Csa_002929 [Cucumis sativus]2.1e-0662.79Show/hide
Query:  QELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        +EL DL G+G D WI+GGD NITR SWEKSHD  I  +M+ FN
Subjt:  QELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

TYK17414.1 hypothetical protein E5676_scaffold434G002760 [Cucumis melo var. makuwa]2.0e-0462.16Show/hide
Query:  ELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARS
        +L DLAG+G D WI GG+FN+TR SWEKSH H +  S
Subjt:  ELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARS

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]2.5e-0453.33Show/hide
Query:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        FW+EL DL G   D+W  GGDFN+ R S EKS++  + +SMR FN
Subjt:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]1.4e-0555.56Show/hide
Query:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        FWQEL DL+ +  + WI  GDFN+TR SWEKS+  P+ +SM  FN
Subjt:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

TrEMBL top hitse value%identityAlignment
A0A0A0KDG4 Uncharacterized protein1.0e-0662.79Show/hide
Query:  QELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        +EL DL G+G D WI+GGD NITR SWEKSHD  I  +M+ FN
Subjt:  QELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

A0A6J1E2G6 uncharacterized protein LOC1110254056.5e-0655.56Show/hide
Query:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        FWQEL DL+ +  + WI  GDFN+TR SWEKS+  P+ +SM  FN
Subjt:  FWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

M5VS59 Reverse transcriptase domain-containing protein (Fragment)5.5e-0551.06Show/hide
Query:  DEFWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        + FW+EL DL G   D+W  GGDFN+ R S EKS++  + +SMR FN
Subjt:  DEFWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

M5WPQ5 Reverse transcriptase domain-containing protein7.2e-0551.06Show/hide
Query:  DEFWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        + FW+EL DL G   D+W  GGDFN+ R S EKS++  + +SMR FN
Subjt:  DEFWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)7.2e-0551.06Show/hide
Query:  DEFWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN
        + FW+EL DL G   D+W  GGDFN+ R S EKS++  + +SMR FN
Subjt:  DEFWQELHDLAGMGRDRWIHGGDFNITRLSWEKSHDHPIARSMRTFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGAATTGGGGAAAAGAGTTCCACGACTGATTCATTGAAGTATTTGGGCTTTGATATAGAGGACTATTTATCTAGCGCAACATGTAACCGCTCCCCCCTCACCAT
GCCTACTGGACCAACCTGGAAATGTAGGGCCATCTACCTCTACAAACCTGGATGTGAGGATCCATTGATGGACCCATTTTTACCCCTTGAATCTGGAGACCAAGCAATTG
ACGCAGTCCTATTGCTTACCTTGCGATTTATGGCTCAACTAGGAATGCGTTGTGATGAATTCTGGCAAGAGTTACATGATTTAGCTGGAATGGGGCGTGATCGATGGATC
CATGGAGGTGATTTCAACATCACTCGTTTGTCATGGGAGAAGTCTCATGATCACCCAATTGCTCGAAGCATGAGAACTTTTAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTAGAATTGGGGAAAAGAGTTCCACGACTGATTCATTGAAGTATTTGGGCTTTGATATAGAGGACTATTTATCTAGCGCAACATGTAACCGCTCCCCCCTCACCAT
GCCTACTGGACCAACCTGGAAATGTAGGGCCATCTACCTCTACAAACCTGGATGTGAGGATCCATTGATGGACCCATTTTTACCCCTTGAATCTGGAGACCAAGCAATTG
ACGCAGTCCTATTGCTTACCTTGCGATTTATGGCTCAACTAGGAATGCGTTGTGATGAATTCTGGCAAGAGTTACATGATTTAGCTGGAATGGGGCGTGATCGATGGATC
CATGGAGGTGATTTCAACATCACTCGTTTGTCATGGGAGAAGTCTCATGATCACCCAATTGCTCGAAGCATGAGAACTTTTAACTAG
Protein sequenceShow/hide protein sequence
MLRIGEKSSTTDSLKYLGFDIEDYLSSATCNRSPLTMPTGPTWKCRAIYLYKPGCEDPLMDPFLPLESGDQAIDAVLLLTLRFMAQLGMRCDEFWQELHDLAGMGRDRWI
HGGDFNITRLSWEKSHDHPIARSMRTFN