; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025431 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025431
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand
Genome locationscaffold13:39578621..39578990
RNA-Seq ExpressionSpg025431
SyntenySpg025431
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060897.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]3.6e-1569.7Show/hide
Query:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        MGNKYSSL+EEQLA +FKKHD DRD KLTKEEL  AF+ LGSRW+  R   +LRAVD NGD +IS+
Subjt:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]8.2e-1268.97Show/hide
Query:  TEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        +EEQLA+VFK HDRD D  LTKEELK AFE LGSR+S FR +E+LRA D NGD +IS+
Subjt:  TEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

KAE8652092.1 hypothetical protein Csa_021918 [Cucumis sativus]3.6e-1569.7Show/hide
Query:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        MGNKYSSL+EEQLA +FKKHD DRD KLTKEEL  AF  LGSRW+  R  E++RAVD N D +ISL
Subjt:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]2.8e-1269.49Show/hide
Query:  LTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        LTEEQLA +FK HDRD D KLTKEELK AF  LGSR+S+FRADE+LRA D +GD  I++
Subjt:  LTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1269.49Show/hide
Query:  LTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        LTEEQLA +FK HDRD D KLTKEELK AF  LGSR+S+FRADE+LRA D +GD  I++
Subjt:  LTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein1.7e-1569.7Show/hide
Query:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        MGNKYSSL+EEQLA +FKKHD DRD KLTKEEL  AF  LGSRW+  R  E++RAVD N D +ISL
Subjt:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

A0A0A0LP43 Uncharacterized protein3.5e-0856.67Show/hide
Query:  SSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIIS
        +SLTE ++A VFK HD+D D +LTKEELKSAF+ LG +++TFR  ++L A D N D +IS
Subjt:  SSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIIS

A0A0A0LRB6 Uncharacterized protein2.0e-1167.24Show/hide
Query:  TEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        +EEQLA+VFK HDRD D  LTKEELK AFE LGSR+  FR +E+LRA D NGD +IS+
Subjt:  TEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

A0A5A7V219 Putative calcium-binding protein CML101.7e-1569.7Show/hide
Query:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        MGNKYSSL+EEQLA +FKKHD DRD KLTKEEL  AF+ LGSRW+  R   +LRAVD NGD +IS+
Subjt:  MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein4.0e-1268.97Show/hide
Query:  TEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        +EEQLA+VFK HDRD D  LTKEELK AFE LGSR+S FR +E+LRA D NGD +IS+
Subjt:  TEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein6.7e-0431.75Show/hide
Query:  KYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL
        K+       L +VF   D +RD +++ EELK +F++LG + S   A+ +++  DI+GD ++ +
Subjt:  KYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACAAGTACAGTTCGTTGACTGAAGAGCAGCTGGCCTCTGTTTTTAAAAAACACGACAGGGACAGAGATGAGAAGCTGACCAAAGAAGAGTTGAAGAGTGCCTT
CGAGTCTTTGGGTTCGAGGTGGAGCACCTTCAGAGCCGACGAATCCCTTCGCGCCGTCGATATAAACGGTGACAGCATCATCAGTTTGGGGGGGATAATTTTTTGTCACT
TGAGCTATGCTCTTGTTGATCCAGCTACAATCGAATTACGATTATGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACAAGTACAGTTCGTTGACTGAAGAGCAGCTGGCCTCTGTTTTTAAAAAACACGACAGGGACAGAGATGAGAAGCTGACCAAAGAAGAGTTGAAGAGTGCCTT
CGAGTCTTTGGGTTCGAGGTGGAGCACCTTCAGAGCCGACGAATCCCTTCGCGCCGTCGATATAAACGGTGACAGCATCATCAGTTTGGGGGGGATAATTTTTTGTCACT
TGAGCTATGCTCTTGTTGATCCAGCTACAATCGAATTACGATTATGTATTTGA
Protein sequenceShow/hide protein sequence
MGNKYSSLTEEQLASVFKKHDRDRDEKLTKEELKSAFESLGSRWSTFRADESLRAVDINGDSIISLGGIIFCHLSYALVDPATIELRLCI