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Spg025433 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025433
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 31-like
Genome locationscaffold13:42036225..42044819
RNA-Seq ExpressionSpg025433
SyntenySpg025433
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0046923 - ER retention sequence binding (molecular function)
InterPro domainsIPR000133 - ER lumen protein retaining receptor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050997.1 DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo var. makuwa]2.2e-2188.71Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTIQEGSE+THAQ RQM IVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

XP_008461517.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo]2.2e-2188.71Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTIQEGSE+THAQ RQM IVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

XP_011659146.2 DEAD-box ATP-dependent RNA helicase 31 [Cucumis sativus]4.8e-2187.1Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTI+EGSE+THAQ RQMQIVAPLEKHFSLL AILKEHIA+D+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

XP_022158751.1 DEAD-box ATP-dependent RNA helicase 31-like [Momordica charantia]8.2e-2187.1Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQI HIALRRDHE+VNTI+EGSEETHAQ RQM IVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

XP_038898727.1 DEAD-box ATP-dependent RNA helicase 31-like [Benincasa hispida]5.7e-2290.32Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTIQEGSE+THAQ RQMQIVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

TrEMBL top hitse value%identityAlignment
A0A0A0K511 Uncharacterized protein2.3e-2187.1Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTI+EGSE+THAQ RQMQIVAPLEKHFSLL AILKEHIA+D+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

A0A1S3CG75 DEAD-box ATP-dependent RNA helicase 31-like1.0e-2188.71Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTIQEGSE+THAQ RQM IVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

A0A5A7U9B3 DEAD-box ATP-dependent RNA helicase 31-like1.0e-2188.71Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTIQEGSE+THAQ RQM IVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

A0A6J1E1W2 DEAD-box ATP-dependent RNA helicase 31-like4.0e-2187.1Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQI HIALRRDHE+VNTI+EGSEETHAQ RQM IVAPLEKHFSLL AILKEHIADD+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

A0A6J1KW12 DEAD-box ATP-dependent RNA helicase 31-like5.2e-2187.1Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
        +VRQISHIALRRDHE+VNTIQEGSEETHAQ RQMQIVAPL+KHFSLL A LKEHIA D+DYK
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK

SwissProt top hitse value%identityAlignment
Q0DBU5 DEAD-box ATP-dependent RNA helicase 313.7e-1656.25Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        +VRQ+ HIA++RD E+VNT++EGSEETH+Q +QM +VAPL+K FS+L  +L +HI++++DYK +
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

Q0JL73 DEAD-box ATP-dependent RNA helicase 264.8e-1657.81Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        +VRQISHIA++R ++++NT++EG EETH+Q  QM +VAPL+ HFS+L  +LK+HIA+D DYK +
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

Q5ZBH5 DEAD-box ATP-dependent RNA helicase 251.8e-1553.12Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        +VRQISHIA++++++++NT+++G EETHAQ  QM ++APL+ HFS+L  +LK+H+A+D DYK +
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

Q94C75 DEAD-box ATP-dependent RNA helicase 251.2e-1454.69Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        +VRQI H+AL+RDHE+VN +QEG+ ETH +  QM ++A L++HFSLL  +LK+HI D++ YK +
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

Q9FNM7 DEAD-box ATP-dependent RNA helicase 261.7e-1656.16Show/hide
Query:  FLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        FL  A    +VRQI H+AL+RDHE++N +QEGS ETH +  QM ++A L++HFSLL  +LKEHIAD++DYK +
Subjt:  FLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

Arabidopsis top hitse value%identityAlignment
AT1G19970.1 ER lumen protein retaining receptor family protein1.1e-1288.89Show/hide
Query:  LPLMQNTKIVEPFTAHYVFTLGIARFLSCAHWVLQV
        L +MQNTKIVEPFTAHYVF LGIARFLSCAHW+LQV
Subjt:  LPLMQNTKIVEPFTAHYVFTLGIARFLSCAHWVLQV

AT1G75760.1 ER lumen protein retaining receptor family protein8.8e-1391.67Show/hide
Query:  LPLMQNTKIVEPFTAHYVFTLGIARFLSCAHWVLQV
        L +MQNTKIVEPFTAHYVF LGIARFLSCAHWVLQV
Subjt:  LPLMQNTKIVEPFTAHYVFTLGIARFLSCAHWVLQV

AT5G08610.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.2e-1756.16Show/hide
Query:  FLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        FL  A    +VRQI H+AL+RDHE++N +QEGS ETH +  QM ++A L++HFSLL  +LKEHIAD++DYK +
Subjt:  FLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

AT5G08620.1 DEA(D/H)-box RNA helicase family protein8.5e-1654.69Show/hide
Query:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        +VRQI H+AL+RDHE+VN +QEG+ ETH +  QM ++A L++HFSLL  +LK+HI D++ YK +
Subjt:  QVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV

AT5G63630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein1.9e-1553.42Show/hide
Query:  FLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV
        FL  A    +VRQI  +ALRRDHE+VN + EG+ ETH Q RQM ++A L++HFSLL  +L+EHI  ++DYK +
Subjt:  FLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTTTTGGTTTCCCTTGCAAATCATGTGGTTTGGGTGTTGCCCCTGATGCAGAACACTAAGATTGTCGAACCGTTTACTGCACATTATGTGTTTACATTGGGTAT
TGCAAGATTCCTTAGTTGCGCTCATTGGGTTCTCCAGGTTCGCCAAATCAGCCACATTGCTTTGAGAAGAGATCATGAATATGTCAATACAATTCAAGAGGGCAGTGAGG
AGACACATGCACAGGCGAGACAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTGTGCTATACTTAAAGAACATATTGCTGATGACCTTGACTATAAG
GAAGTTCCTAGCTATTATTCGGTCATTGGACAGCAAGTATTCGAGGCCGTTGGGTTCCAATCGGTTCCTATATATTTGACTTCTTCTATAGTTGAGGAGTTTTACAATTT
GAAGTATATGTTGGTGTATTCTCTTGCTCGTGCAAAAGTTACTCACTCTTCCTTGCCTAAGATAGAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTTTTGGTTTCCCTTGCAAATCATGTGGTTTGGGTGTTGCCCCTGATGCAGAACACTAAGATTGTCGAACCGTTTACTGCACATTATGTGTTTACATTGGGTAT
TGCAAGATTCCTTAGTTGCGCTCATTGGGTTCTCCAGGTTCGCCAAATCAGCCACATTGCTTTGAGAAGAGATCATGAATATGTCAATACAATTCAAGAGGGCAGTGAGG
AGACACATGCACAGGCGAGACAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTGTGCTATACTTAAAGAACATATTGCTGATGACCTTGACTATAAG
GAAGTTCCTAGCTATTATTCGGTCATTGGACAGCAAGTATTCGAGGCCGTTGGGTTCCAATCGGTTCCTATATATTTGACTTCTTCTATAGTTGAGGAGTTTTACAATTT
GAAGTATATGTTGGTGTATTCTCTTGCTCGTGCAAAAGTTACTCACTCTTCCTTGCCTAAGATAGAAAATTAG
Protein sequenceShow/hide protein sequence
MLVLVSLANHVVWVLPLMQNTKIVEPFTAHYVFTLGIARFLSCAHWVLQVRQISHIALRRDHEYVNTIQEGSEETHAQARQMQIVAPLEKHFSLLCAILKEHIADDLDYK
EVPSYYSVIGQQVFEAVGFQSVPIYLTSSIVEEFYNLKYMLVYSLARAKVTHSSLPKIEN