; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025438 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025438
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc finger CCCH domain-containing protein 20-like
Genome locationscaffold13:40596457..40597362
RNA-Seq ExpressionSpg025438
SyntenySpg025438
Gene Ontology termsGO:0061157 - mRNA destabilization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598310.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia]9.4e-14581.7Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HISSWDSLDD AA IPSYF A ++SPLDSPT+A+M++DSS WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKF YSG ECP+LRHG C KGDAC+YAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL ALMHNL  +ELK NP ++GFG + RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

KAG7029281.1 Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-14582.03Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HISSWDSLDD AA IPSYF A ++SPLDSPT+A+M++DSS WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKF YSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL ALMHNL  +ELK NP ++GFG + RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

XP_022961630.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]1.1e-14582.03Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HISSWDSLDD AA IPSYF AD++SPLDSPT+A+M++DS  WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL A+MHNL  +ELK NP ++GFG + RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

XP_022997351.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]1.2e-14482.03Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HISSWDSLDD AA IPSYF A ++SPLDSPT+A+M++DSSFWEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG  CRRRVCFFAH+SEQLRIP KQS+RSPR     A  VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP  TGGESFSRL ALMHNL  +ELK NP ++GFG S RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMR+NSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

XP_023545606.1 zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]1.2e-14482.03Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LN T HISSWDSLDD AA IPSYF A ++SPLDSPT+A+M++DSS WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL ALMHNL  +ELK NP ++GFG + RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

TrEMBL top hitse value%identityAlignment
A0A1S3BBA7 LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 205.6e-14381.05Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMLLNPTAHIS+WDSLDD +A I SYF+A H+SPLDSPT+ALM+FDSS WED DLPA VD FSCD FRMY+FKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG CKKGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAHTSEQLRIP KQS+RSPRA       VSSPTSIL+
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        SPSSDSPP+SPISP  +GGES SRL ALMH+L+L+E K NP V+ F  +LRRNSG FDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDR  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGS++
Subjt:  WAGSRS

A0A5A7V5C0 Zinc finger CCCH domain-containing protein 201.7e-14481.7Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESMLLNPTAHIS+WDSLDD +A I SYF+A H+SPLDSPT+ALM+FDSS WED DLPA VD FSCD FRMY+FKVR+CARGRSHDWTKCPYAH GEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG CKKGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAHTSEQLRIP KQS+RSPRA       VSSPTSIL+
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRA-----ATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        SPSSDSPP+SPISP  +GGESFSRL ALMH+L+L+ELK NP V+ F  +LRRNSG FDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDR  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGS++
Subjt:  WAGSRS

A0A6J1GGI4 zinc finger CCCH domain-containing protein 20-like3.6e-14282.74Show/hide
Query:  MITESMLLNPTAHISSWDSLDD-SAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGE
        MITESMLLNP+AH SSWDSLDD +AA I SY  A H+SPLDSPT A+MEFDSSFWE+Q+LPAAVDAF+CD FRMY+FKVR+CARGRSHDWTKCPYAH GE
Subjt:  MITESMLLNPTAHISSWDSLDD-SAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGE

Query:  KARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAA-----TVSSPTSIL
        KARRRDPRKFNYSG ECP LRHG CKKGDACE+AHG FEIWLHPDRYRTQPCRDGI CRRRVCFFAHT EQLRIPAKQSL SPRAA      V+SPTSIL
Subjt:  KARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAA-----TVSSPTSIL

Query:  ISPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPL
        ISP  DSPPMSPISP TTGGESFSRL  LMHNLQL++ K NP+V+GF SS RRNSGGFDLWDR+ EEEPAMERVESGRNLRAQMYAKLMRENSVDR  PL
Subjt:  ISPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPL

Query:  IWAGSRS
        I AGS+S
Subjt:  IWAGSRS

A0A6J1HCT8 zinc finger CCCH domain-containing protein 20-like5.4e-14682.03Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HISSWDSLDD AA IPSYF AD++SPLDSPT+A+M++DS  WEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIP KQS+RSPR     A+ VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP TTGGESFSRL A+MHNL  +ELK NP ++GFG + RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMRENSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

A0A6J1K790 zinc finger CCCH domain-containing protein 20-like5.9e-14582.03Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK
        MI ESM LNPT HISSWDSLDD AA IPSYF A ++SPLDSPT+A+M++DSSFWEDQDLPA VDAF+CDHFRMY+FKVR CARGRSHDWTKCPYAHAGEK
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEK

Query:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI
        ARRRDPRKFNYSG ECP+LRHG C KGDACEYAHGVFEIWLHPDRYRTQPCRDG  CRRRVCFFAH+SEQLRIP KQS+RSPR     A  VSSPTSILI
Subjt:  ARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR-----AATVSSPTSILI

Query:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI
        S SSDSPPMSPISP  TGGESFSRL ALMHNL  +ELK NP ++GFG S RRNSG FD WDR NEEEPAMERVESGRNLRAQMYAKLMR+NSV+R  PLI
Subjt:  SPSSDSPPMSPISPATTGGESFSRLAALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLI

Query:  WAGSRS
         AGSR+
Subjt:  WAGSRS

SwissProt top hitse value%identityAlignment
O82199 Zinc finger CCCH domain-containing protein 203.8e-7246.36Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA
        NPT HI  W   +D       Y + D  S +    + L  +  S   D D         + +DA++CDHFRMY+FKVR CARGRSHDWT+CPYAH GEKA
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA

Query:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS
        RRRDPRKF+YSG  CP  R G CK+GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R+   QS     +  V SPT        IS
Subjt:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS

Query:  PSSDSPPMSPISPATTGGESFSR---------LAALMHNLQLEELKP------NPSVAGFGSSLRRNSG-----------------GF-DLWDRSNEEEP
        PSS+SPP+SP   + +     SR         + A + NLQL ++K       N  + G+GS      G                 GF ++W+   EEEP
Subjt:  PSSDSPPMSPISPATTGGESFSR---------LAALMHNLQLEELKP------NPSVAGFGSSLRRNSG-----------------GF-DLWDRSNEEEP

Query:  AMERVESGRNLRAQMYAKLMRENSVDRSPP
        AMERVESGR LRAQ++ KL +EN + R  P
Subjt:  AMERVESGRNLRAQMYAKLMRENSVDRSPP

O82307 Zinc finger CCCH domain-containing protein 231.5e-6848.73Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT
        +PT HI  WD ++D  A I S F++ +L+ ++    SP+  L  F S F          D D  +        D+FS D FR+Y+FK+R CARGRSHDWT
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV
        +CP+AH GEKARRRDPRKF+YSG  CP  R GSC++GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAHT+EQLR+    SL       +   
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV

Query:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMHNLQLEE-----LKPNPSVA--GFGSSLRRNSGGFDLWDRSN----EEEPAMERVESGR
        +SPTSIL+SPS    S+SPP+SP         S   L A M  +QL         P  S     F SSLR        W R      EE PAME VESG+
Subjt:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMHNLQLEE-----LKPNPSVA--GFGSSLRRNSGGFDLWDRSN----EEEPAMERVESGR

Query:  NLRAQMYAKLMRENSV
         LRA+MYA+L RENS+
Subjt:  NLRAQMYAKLMRENSV

Q6L4N4 Zinc finger CCCH domain-containing protein 355.0e-5639.04Show/hide
Query:  HISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQD----LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRK
        H++S  S  +   G  S   A     LD+    L   +++  ED++    + AAVDA++CD FRMY+FKVR CARGRSHDWT+CP+AH GEKARRRDPR+
Subjt:  HISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQD----LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRK

Query:  FNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRI---PAKQSLRSPR----------------------
        + YSG  CP+ R G CK+GDACE+AHGVFE WLHP RYRTQPC+DG  CRRRVCFFAHT +QLR+     +Q   SPR                      
Subjt:  FNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRI---PAKQSLRSPR----------------------

Query:  ------------AATVSSPTSILI----SPSSDSPPMSPISP------ATTG-GESFSRLAALMHNLQLEELKPNPSVAGF-------GS----------
                    +   SSPTS L+    SP S+SPP+SP +       A  G G   + +   +  L+L   +  PS A F       GS          
Subjt:  ------------AATVSSPTSILI----SPSSDSPPMSPISP------ATTG-GESFSRLAALMHNLQLEELKPNPSVAGF-------GS----------

Query:  ---------------SLRRNSGGFDLWDRSN----EEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAG
                       ++   SG     +  +    EEE  MERVESGR LR +++ +L +E +V        AG
Subjt:  ---------------SLRRNSGGFDLWDRSN----EEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAG

Q9FU27 Zinc finger CCCH domain-containing protein 21.3e-5945.36Show/hide
Query:  LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCR
        + AAVDA++CD FRMY+FKVR CARGRSHDWT+CP+AH GEKARRRDPRK++YSG  CP+ R G CK+GDACEYAHGVFE WLHP RYRTQPC+DG  CR
Subjt:  LPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCR

Query:  RRVCFFAHTSEQLRI-PAKQSLRSPRAAT---------------------------VSSPTSILI----SPSSDSPPMSPISPATTG-------GESFSR
        RRVCFFAHT +QLR+ PA+QS  SPR+                              SSPTS L+    SP S+SPP+SP   A          G   + 
Subjt:  RRVCFFAHTSEQLRI-PAKQSLRSPRAAT---------------------------VSSPTSILI----SPSSDSPPMSPISPATTG-------GESFSR

Query:  LAALMHNLQLEELKPNP--------SVAGFG-------------------------SSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMREN
        + A    L+L ++K +P        S A +G                         SS   N    DL     +EEP ++RVESGR LR +++ +L R+ 
Subjt:  LAALMHNLQLEELKPNP--------SVAGFG-------------------------SSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMREN

Query:  SV
        ++
Subjt:  SV

Q9M0G2 Zinc finger CCCH domain-containing protein 494.8e-6746.41Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT
        MI E+    PT  I  W  L++       +F+    SP  S   AL          E D   + D   P + +DA+SCDHFRMYDFKVR CARGRSHDWT
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP
        +CPYAH GEKARRRDPRK++YSG  CP+ R G CKKGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAH+ +QLR    +S     +  VSSP
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP

Query:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMHNLQLEELKP---NPSVAGFGS--------------SLRRNSGGFDLWDR
               + ISP S SPPMSP      SP T       G  S + +     NLQ   +K    N  + GFGS              +     G  D+W+ 
Subjt:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMHNLQLEELKP---NPSVAGFGS--------------SLRRNSGGFDLWDR

Query:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR
          EEEP MER VESGR LR +M  KL +EN +DR
Subjt:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR

Arabidopsis top hitse value%identityAlignment
AT2G19810.1 CCCH-type zinc finger family protein2.7e-7346.36Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA
        NPT HI  W   +D       Y + D  S +    + L  +  S   D D         + +DA++CDHFRMY+FKVR CARGRSHDWT+CPYAH GEKA
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDL-------PAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKA

Query:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS
        RRRDPRKF+YSG  CP  R G CK+GDACE++HGVFE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R+   QS     +  V SPT        IS
Subjt:  RRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPT-----SILIS

Query:  PSSDSPPMSPISPATTGGESFSR---------LAALMHNLQLEELKP------NPSVAGFGSSLRRNSG-----------------GF-DLWDRSNEEEP
        PSS+SPP+SP   + +     SR         + A + NLQL ++K       N  + G+GS      G                 GF ++W+   EEEP
Subjt:  PSSDSPPMSPISPATTGGESFSR---------LAALMHNLQLEELKP------NPSVAGFGSSLRRNSG-----------------GF-DLWDRSNEEEP

Query:  AMERVESGRNLRAQMYAKLMRENSVDRSPP
        AMERVESGR LRAQ++ KL +EN + R  P
Subjt:  AMERVESGRNLRAQMYAKLMRENSVDRSPP

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.1e-6948.73Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT
        +PT HI  WD ++D  A I S F++ +L+ ++    SP+  L  F S F          D D  +        D+FS D FR+Y+FK+R CARGRSHDWT
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV
        +CP+AH GEKARRRDPRKF+YSG  CP  R GSC++GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAHT+EQLR+    SL       +   
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV

Query:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMHNLQLEE-----LKPNPSVA--GFGSSLRRNSGGFDLWDRSN----EEEPAMERVESGR
        +SPTSIL+SPS    S+SPP+SP         S   L A M  +QL         P  S     F SSLR        W R      EE PAME VESG+
Subjt:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMHNLQLEE-----LKPNPSVA--GFGSSLRRNSGGFDLWDRSN----EEEPAMERVESGR

Query:  NLRAQMYAKLMRENSV
         LRA+MYA+L RENS+
Subjt:  NLRAQMYAKLMRENSV

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein1.1e-6948.73Show/hide
Query:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT
        +PT HI  WD ++D  A I S F++ +L+ ++    SP+  L  F S F          D D  +        D+FS D FR+Y+FK+R CARGRSHDWT
Subjt:  NPTAHISSWDSLDDSAAGIPSYFAADHLSPLD----SPTSALMEFDSSF--------WEDQDLPAA------VDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV
        +CP+AH GEKARRRDPRKF+YSG  CP  R GSC++GD+CE++HGVFE WLHP RYRTQPC+DG  CRRR+CFFAHT+EQLR+    SL       +   
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPR---AATV

Query:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMHNLQLEE-----LKPNPSVA--GFGSSLRRNSGGFDLWDRSN----EEEPAMERVESGR
        +SPTSIL+SPS    S+SPP+SP         S   L A M  +QL         P  S     F SSLR        W R      EE PAME VESG+
Subjt:  SSPTSILISPS----SDSPPMSPISPATTGGESFSRLAALMHNLQLEE-----LKPNPSVA--GFGSSLRRNSGGFDLWDRSN----EEEPAMERVESGR

Query:  NLRAQMYAKLMRENSV
         LRA+MYA+L RENS+
Subjt:  NLRAQMYAKLMRENSV

AT2G41900.1 CCCH-type zinc finger protein with ARM repeat domain1.0e-4852.08Show/hide
Query:  SPLDSPTS-ALMEFDSSFWEDQDLPAAVDA-FSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAH
        SPL SP      EF   +  D  LP   ++ ++ D FRMY FKVR C+R  SHDWT+CP+ H GE ARRRDPRKF+YS V CP+ R G+C++GD CEYAH
Subjt:  SPLDSPTS-ALMEFDSSFWEDQDLPAAVDA-FSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAH

Query:  GVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLR---IPAKQSLRSPRA-ATVSSPTSILISPSSDSPPMSPISPATTG-GESFSRLA
        GVFE WLHP +YRT+ C+DG GC RRVCFFAHT E+LR        ++ SPR+ A  ++  S+L    S    MSP+SP+  G G S S +A
Subjt:  GVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLR---IPAKQSLRSPRA-ATVSSPTSILISPSSDSPPMSPISPATTG-GESFSRLA

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.4e-6846.41Show/hide
Query:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT
        MI E+    PT  I  W  L++       +F+    SP  S   AL          E D   + D   P + +DA+SCDHFRMYDFKVR CARGRSHDWT
Subjt:  MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALM---------EFDSSFWEDQDLP-AAVDAFSCDHFRMYDFKVRTCARGRSHDWT

Query:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP
        +CPYAH GEKARRRDPRK++YSG  CP+ R G CKKGD+CE+AHGVFE WLHP RYRTQPC+DG  C R++CFFAH+ +QLR    +S     +  VSSP
Subjt:  KCPYAHAGEKARRRDPRKFNYSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSP

Query:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMHNLQLEELKP---NPSVAGFGS--------------SLRRNSGGFDLWDR
               + ISP S SPPMSP      SP T       G  S + +     NLQ   +K    N  + GFGS              +     G  D+W+ 
Subjt:  T-----SILISPSSDSPPMSP-----ISPAT------TGGESFSRLAALMHNLQLEELKP---NPSVAGFGS--------------SLRRNSGGFDLWDR

Query:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR
          EEEP MER VESGR LR +M  KL +EN +DR
Subjt:  SNEEEPAMER-VESGRNLRAQMYAKLMRENSVDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGAATCAATGCTCCTCAATCCAACAGCCCACATTTCATCCTGGGACTCCCTCGACGATTCCGCCGCCGGAATCCCCTCCTATTTCGCCGCCGACCACTTGTC
GCCGCTCGACTCGCCGACGTCGGCGCTCATGGAGTTCGATTCGTCGTTCTGGGAGGATCAGGATCTGCCGGCGGCGGTGGACGCCTTCTCGTGCGACCATTTCCGGATGT
ACGACTTCAAAGTCCGCACGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAC
TACTCCGGCGTCGAGTGCCCGAATTTACGCCATGGGAGTTGTAAAAAAGGGGATGCCTGTGAGTACGCTCATGGAGTTTTCGAAATCTGGCTCCACCCGGACCGGTACCG
GACTCAGCCGTGCCGTGACGGAATCGGCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACTTCGGAGCAACTCCGGATTCCTGCAAAACAGAGCCTCCGGTCTCCACGGG
CGGCGACTGTATCATCGCCGACGTCGATCCTAATCTCGCCGTCGTCGGACTCCCCTCCGATGTCTCCGATCAGCCCTGCAACCACCGGCGGCGAATCGTTCAGCAGATTA
GCCGCATTGATGCACAATCTCCAGCTTGAGGAATTAAAGCCGAACCCGTCAGTCGCCGGATTCGGTTCAAGTCTCCGGCGGAACTCCGGCGGATTCGATCTATGGGACAG
AAGTAACGAAGAAGAACCAGCAATGGAGAGAGTGGAATCGGGAAGAAACCTCCGAGCCCAAATGTACGCCAAATTAATGCGAGAGAATTCAGTGGACAGATCGCCGCCGC
TGATATGGGCTGGATCTCGGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGAATCAATGCTCCTCAATCCAACAGCCCACATTTCATCCTGGGACTCCCTCGACGATTCCGCCGCCGGAATCCCCTCCTATTTCGCCGCCGACCACTTGTC
GCCGCTCGACTCGCCGACGTCGGCGCTCATGGAGTTCGATTCGTCGTTCTGGGAGGATCAGGATCTGCCGGCGGCGGTGGACGCCTTCTCGTGCGACCATTTCCGGATGT
ACGACTTCAAAGTCCGCACGTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACGCCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAAC
TACTCCGGCGTCGAGTGCCCGAATTTACGCCATGGGAGTTGTAAAAAAGGGGATGCCTGTGAGTACGCTCATGGAGTTTTCGAAATCTGGCTCCACCCGGACCGGTACCG
GACTCAGCCGTGCCGTGACGGAATCGGCTGCCGGCGGCGAGTCTGTTTCTTCGCCCATACTTCGGAGCAACTCCGGATTCCTGCAAAACAGAGCCTCCGGTCTCCACGGG
CGGCGACTGTATCATCGCCGACGTCGATCCTAATCTCGCCGTCGTCGGACTCCCCTCCGATGTCTCCGATCAGCCCTGCAACCACCGGCGGCGAATCGTTCAGCAGATTA
GCCGCATTGATGCACAATCTCCAGCTTGAGGAATTAAAGCCGAACCCGTCAGTCGCCGGATTCGGTTCAAGTCTCCGGCGGAACTCCGGCGGATTCGATCTATGGGACAG
AAGTAACGAAGAAGAACCAGCAATGGAGAGAGTGGAATCGGGAAGAAACCTCCGAGCCCAAATGTACGCCAAATTAATGCGAGAGAATTCAGTGGACAGATCGCCGCCGC
TGATATGGGCTGGATCTCGGAGCTAA
Protein sequenceShow/hide protein sequence
MITESMLLNPTAHISSWDSLDDSAAGIPSYFAADHLSPLDSPTSALMEFDSSFWEDQDLPAAVDAFSCDHFRMYDFKVRTCARGRSHDWTKCPYAHAGEKARRRDPRKFN
YSGVECPNLRHGSCKKGDACEYAHGVFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAATVSSPTSILISPSSDSPPMSPISPATTGGESFSRL
AALMHNLQLEELKPNPSVAGFGSSLRRNSGGFDLWDRSNEEEPAMERVESGRNLRAQMYAKLMRENSVDRSPPLIWAGSRS