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Spg025452 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025452
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionType IV secretion system protein virB4
Genome locationscaffold13:42163546..42166937
RNA-Seq ExpressionSpg025452
SyntenySpg025452
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8395964.1 hypothetical protein HHK36_017575 [Tetracentron sinense]7.5e-0793.94Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        V+ GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
KAF8398622.1 hypothetical protein HHK36_017553 [Tetracentron sinense]7.5e-0793.94Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        V+ GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
KZV15784.1 hypothetical protein F511_02000 [Dorcoceras hygrometricum]9.9e-0790.91Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        ++ GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
XP_022958630.1 uncharacterized protein LOC111459798 [Cucurbita moschata]1.3e-06100Show/hide
Query:  GIVLLIILISGLCCMMGIDTPTRFETPQDS
        GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  GIVLLIILISGLCCMMGIDTPTRFETPQDS
XP_028096319.1 uncharacterized protein LOC114296231 [Camellia sinensis]1.3e-06100Show/hide
Query:  GIVLLIILISGLCCMMGIDTPTRFETPQDS
        GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  GIVLLIILISGLCCMMGIDTPTRFETPQDS
TrEMBL top hitse value%identityAlignment
A0A2Z7A2L8 Uncharacterized protein4.8e-0790.91Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        ++ GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
A0A5A7Q7K0 Glutamate racemase6.2e-0787.88Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        ++ GIVLL+ILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
A0A5A7QZ72 Type IV secretion system protein virB46.2e-0787.88Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        ++ GIVLL+ILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
A0A6I9TW06 uncharacterized protein LOC1051702106.2e-0787.88Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        ++ GIVLL+ILISGLCCMMGIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
A0A6J1K7L5 uncharacterized protein LOC1114913656.2e-07100Show/hide
Query:  GIVLLIILISGLCCMMGIDTPTRFETPQDS
        GIVLLIILISGLCCMMGIDTPTRFETPQDS
Subjt:  GIVLLIILISGLCCMMGIDTPTRFETPQDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13410.1 unknown protein2.3e-0981.82Show/hide
Query:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS
        ++ GIV L+ILISGLCCM GIDTPTRFETPQDS
Subjt:  VVQGIVLLIILISGLCCMMGIDTPTRFETPQDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCGCACCCGTTTGAGTGGATTTCTTGCGGTAGGCTCAAAGGATCTAGCAAAAACCTCTGGACTGCTATTGCTTCGGTTTTTCTTCTCTTTTCCCAGTTTGTCAAA
TGTTCCATTGGAGACGGTTCTAATACCCATTTCTGGGAGGATTCTTGGGTGGGGGAAAAAACCTTTGAGCATTATGTTTCCTCGACTTTATCTTCTGTCGAGAAAGAGGT
TGCATTCGGTAGCTTTTGTCTTCCCTGATTATGATTTCTCTGCGCCTTCCCTAGACTTCCGTCGCCCCCTCACTGATCGAGAAGCGACAGAGATCACTTGCCTCCTTTCC
ATGTTGGTTAACCAGTCGTTTCGCCATGGGGGATCAGATCCAAAGGTTTTCCTCGCTTGTGTTGCCGCCGCAGTGGAGGATTTTGGTTGTGCTGCCATCCTTAATGGAGG
TGGTGGAGGTGGGGGGGAGGGAGGACAGGCCACCATTGCTGTGAAGAAGGGCTATCTCCGCGAGCGTTCCTTTTTTGTTCGGAACCTTTTCGACCCATATGAACGCTTCT
TTAGTGGTGTGGGTGTCTTCATGCTTAAGATGGAGGCTAGGTTTGGGGCTATACGGTGGAGGAAGGTGGTCGGAGGGGAGGGTTTTGGTCATGAAGTAGTGCAGGGGATC
GTTTTGCTTATAATCCTCATATCAGGCCTTTGCTGTATGATGGGTATTGACACCCCAACGAGATTTGAGACACCTCAAGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCGCACCCGTTTGAGTGGATTTCTTGCGGTAGGCTCAAAGGATCTAGCAAAAACCTCTGGACTGCTATTGCTTCGGTTTTTCTTCTCTTTTCCCAGTTTGTCAAA
TGTTCCATTGGAGACGGTTCTAATACCCATTTCTGGGAGGATTCTTGGGTGGGGGAAAAAACCTTTGAGCATTATGTTTCCTCGACTTTATCTTCTGTCGAGAAAGAGGT
TGCATTCGGTAGCTTTTGTCTTCCCTGATTATGATTTCTCTGCGCCTTCCCTAGACTTCCGTCGCCCCCTCACTGATCGAGAAGCGACAGAGATCACTTGCCTCCTTTCC
ATGTTGGTTAACCAGTCGTTTCGCCATGGGGGATCAGATCCAAAGGTTTTCCTCGCTTGTGTTGCCGCCGCAGTGGAGGATTTTGGTTGTGCTGCCATCCTTAATGGAGG
TGGTGGAGGTGGGGGGGAGGGAGGACAGGCCACCATTGCTGTGAAGAAGGGCTATCTCCGCGAGCGTTCCTTTTTTGTTCGGAACCTTTTCGACCCATATGAACGCTTCT
TTAGTGGTGTGGGTGTCTTCATGCTTAAGATGGAGGCTAGGTTTGGGGCTATACGGTGGAGGAAGGTGGTCGGAGGGGAGGGTTTTGGTCATGAAGTAGTGCAGGGGATC
GTTTTGCTTATAATCCTCATATCAGGCCTTTGCTGTATGATGGGTATTGACACCCCAACGAGATTTGAGACACCTCAAGATTCTTAA
Protein sequenceShow/hide protein sequence
MVRTRLSGFLAVGSKDLAKTSGLLLLRFFFSFPSLSNVPLETVLIPISGRILGWGKKPLSIMFPRLYLLSRKRLHSVAFVFPDYDFSAPSLDFRRPLTDREATEITCLLS
MLVNQSFRHGGSDPKVFLACVAAAVEDFGCAAILNGGGGGGGEGGQATIAVKKGYLRERSFFVRNLFDPYERFFSGVGVFMLKMEARFGAIRWRKVVGGEGFGHEVVQGI
VLLIILISGLCCMMGIDTPTRFETPQDS