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Spg025480 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025480
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-pro-like protein
Genome locationscaffold13:30020185..30022418
RNA-Seq ExpressionSpg025480
SyntenySpg025480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046607.1 Gag-pro-like protein [Cucumis melo var. makuwa]5.9e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT  + K VAGTSSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
KAA0047384.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.5e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT R+ K VAG SSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
KAA0049590.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.5e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT R+ K VAG SSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]5.9e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT  + K VAGTSSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
XP_008452348.1 PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]5.9e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT  + K VAGTSSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
TrEMBL top hitse value%identityAlignment
A0A5A7TXF2 Gag-pro-like protein2.9e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT  + K VAGTSSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
A0A5A7U2N8 Gag-pro-like protein2.2e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT R+ K VAG SSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
A0A5A7V1Y8 Gag-pro-like protein2.9e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT  + K VAGTSSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
A0A5A7V681 Retrotrans_gag domain-containing protein2.9e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT  + K VAGTSSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
A0A5D3CQI8 Gag-pro-like protein2.2e-0664.15Show/hide
Query:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
        MD+Q NDQVQAV++DVE LK+Q+AKILE+LT R+ K VAG SSQ EV    +L
Subjt:  MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCAAGTCAATGATCAGGTACAGGCAGTCCAACGAGATGTGGAAGAATTGAAAGAGCAGATGGCAAAGATTTTGGAAATTCTCACTGCAAGAAAAGAAAAGTA
TGTGGCAGGAACATCATCACAGGCCGAAGTAAGTCAGACGACACTCCTCCTTACCCTCAAGGACGTTTTCTTAAGGATTTCTAAGCCTGGAGTGGATACCGGGTCATTTG
CGTGGCCTGCTTGGATGGGGAATGACGCAGGATATGTCATTCCTCCCAAATGCGAATTCGATAACATTTGTGGCGTAAACCTTGGAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATCAAGTCAATGATCAGGTACAGGCAGTCCAACGAGATGTGGAAGAATTGAAAGAGCAGATGGCAAAGATTTTGGAAATTCTCACTGCAAGAAAAGAAAAGTA
TGTGGCAGGAACATCATCACAGGCCGAAGTAAGTCAGACGACACTCCTCCTTACCCTCAAGGACGTTTTCTTAAGGATTTCTAAGCCTGGAGTGGATACCGGGTCATTTG
CGTGGCCTGCTTGGATGGGGAATGACGCAGGATATGTCATTCCTCCCAAATGCGAATTCGATAACATTTGTGGCGTAAACCTTGGAGGATAA
Protein sequenceShow/hide protein sequence
MDDQVNDQVQAVQRDVEELKEQMAKILEILTARKEKYVAGTSSQAEVSQTTLLLTLKDVFLRISKPGVDTGSFAWPAWMGNDAGYVIPPKCEFDNICGVNLGG