CuGenDBv2

Gene ID	Spg025504
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	helicase and polymerase-containing protein TEBICHI isoform X1
Genome location	scaffold13:32057282..32077127
RNA-Seq Expression	Spg025504
Synteny	Spg025504
Gene Ontology terms	GO:0006261 - DNA-dependent DNA replication (biological process) GO:0006302 - double-strand break repair (biological process) GO:0009640 - photomorphogenesis (biological process) GO:0009933 - meristem structural organization (biological process) GO:0010468 - regulation of gene expression (biological process) GO:0051301 - cell division (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:1902749 - regulation of cell cycle G2/M phase transition (biological process) GO:1990067 - intrachromosomal DNA recombination (biological process) GO:2000011 - regulation of adaxial/abaxial pattern formation (biological process) GO:0003677 - DNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004386 - helicase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6598791.1 Helicase and polymerase-containing protein TEBICHI, partial [Cucurbita argyrosperma subsp. sororia]

8.6e-67

91.84

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVTSQD GN DNPSHSVRENLSGQ +VKRNLLLKINSSS+NEHEEPTLS+G HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYETRSSAVKSMASDWG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

KAG7029729.1 Helicase and polymerase-containing protein TEBICHI [Cucurbita argyrosperma subsp. argyrosperma]

5.0e-67

92.52

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVTSQD GN DNPSHSVRENLSGQ LVKRNLLLKINSSS+NEHEEPTLS+G HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYETRSSAVKSMASDWG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

XP_023545795.1 helicase and polymerase-containing protein TEBICHI isoform X2 [Cucurbita pepo subsp. pepo]

2.1e-65

92.52

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVTSQD GN DNPSHSVRENLSGQ  VKRNLLLKINSSS+NEHEEPTLSRG HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYETRSSAVKSMASDWG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

XP_038885698.1 helicase and polymerase-containing protein TEBICHI isoform X1 [Benincasa hispida]

3.3e-66

88.44

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Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYD+DGK++LEGSPGAKGTLDNYLVTSQDH NSDNPS+SVRENLSGQ LVKRNLLL+INSSS+NEHEEPTLSRGC T+ A EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYET SS VK+MASDWG+ PCTEKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

XP_038885702.1 helicase and polymerase-containing protein TEBICHI isoform X2 [Benincasa hispida]

3.3e-66

88.44

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYD+DGK++LEGSPGAKGTLDNYLVTSQDH NSDNPS+SVRENLSGQ LVKRNLLL+INSSS+NEHEEPTLSRGC T+ A EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYET SS VK+MASDWG+ PCTEKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BQB6 helicase and polymerase-containing protein TEBICHI isoform X1

1.1e-59

83.67

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSY+KDGKR+ EGSPGAKGTLDNYLV SQDHGNSDNP   VRE L  Q LVKRNLLL+INSSSKNE EE  LSRG HTSEA +G
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTL++SYET SSAVK+MASDWG+ PCTEKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

A0A6J1HEV7 helicase and polymerase-containing protein TEBICHI isoform X2

8.1e-63

87.76

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKR PLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVT   +  +DNPSHSVRENLSGQ LVKRNLLLKINSSS+NEHEEPTLS+G HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYETRSSAVKSMAS WG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

A0A6J1HGW7 helicase and polymerase-containing protein TEBICHI isoform X1

8.1e-63

87.76

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKR PLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVT   +  +DNPSHSVRENLSGQ LVKRNLLLKINSSS+NEHEEPTLS+G HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYETRSSAVKSMAS WG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

A0A6J1K209 helicase and polymerase-containing protein TEBICHI isoform X1

8.7e-65

91.16

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVTSQD GN DNPSHSVRENLSGQ  VKRNLLLKIN+SS+NEHEEPTLSRG HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYE RSSAVKSMASDWG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

A0A6J1KAV2 helicase and polymerase-containing protein TEBICHI isoform X2

8.7e-65

91.16

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPG KGTLDNYLVTSQD GN DNPSHSVRENLSGQ  VKRNLLLKIN+SS+NEHEEPTLSRG HTSEA EG
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        IKKRTLEDSYE RSSAVKSMASDWG+ PC EKPELKQFAADFLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

SwissProt top hits

e value

%identity

Alignment

Q588V7 Helicase and polymerase-containing protein TEBICHI

5.3e-11

34.69

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FY SKKRK  +P+LKSG  +K+ K + E SPG KGTLD+YL  S D  ++ N     R     Q    R L L++++SS  ++  P L +    +   E 
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        + +   +D ++   +A          A   +  EL+ FA  FLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

Arabidopsis top hits

e value

%identity

Alignment

AT4G32700.2 helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding

3.8e-12

34.69

Show/hide

Query:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG
        FY SKKRK  +P+LKSG  +K+ K + E SPG KGTLD+YL  S D  ++ N     R     Q    R L L++++SS  ++  P L +    +   E 
Subjt:  FYASKKRKPLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEG

Query:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC
        + +   +D ++   +A          A   +  EL+ FA  FLSLYC
Subjt:  IKKRTLEDSYETRSSAVKSMASDWGIAPCTEKPELKQFAADFLSLYC

Sequences

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CDS sequence

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ATGTTAATTAACCGCAGTAACCTGTCTGTTCAATTCTTCTACTGCTGTACTGTGCGCAACATTTCGTACATCAGCTTTGGCGGCAGGGTTGAGAATTTTAAAAGTTCATT
CGAACTTCATTCTTTTTGGCGCCGAGACGTTGCCGAGATCGAAGTTGGAGTTTCGCCAAGGTTCTCAATTGCCCATGAATGGCGTCCGGCTCTCCTCCTTCGCGCATCGA
CCAGATTAATTCAAGGTCTATTACAATCTTGTTATCAATTCTTGATGGGATGGAATGTTATTCATGCTTCTGAAAATAAGAATTTGTTTTACGCTTCTAAGAAAAGGAAA
CCTCTTACTCCCAGTCTAAAGTCGGGGAGTTATGACAAGGATGGAAAAAGGTCACTTGAAGGGTCTCCTGGTGCCAAAGGTACGTTGGACAATTACCTGGTGACCTCACA
GGACCATGGTAACTCTGATAACCCATCACATTCAGTTCGGGAAAACTTGTCTGGGCAAGGCCTGGTAAAAAGAAACCTATTGTTGAAAATTAATAGCTCCTCTAAAAATG
AACACGAGGAACCCACTTTGTCTAGAGGGTGTCACACTTCTGAAGCAGCTGAAGGAATCAAGAAAAGAACTCTGGAAGACTCATATGAGACCAGAAGTTCAGCAGTCAAA
TCCATGGCAAGTGACTGGGGTATTGCACCGTGCACGGAGAAACCAGAGCTTAAACAGTTTGCAGCTGATTTCTTGTCTCTGTACTGCAGGTATATGTAA

mRNA sequence

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Protein sequence

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MLINRSNLSVQFFYCCTVRNISYISFGGRVENFKSSFELHSFWRRDVAEIEVGVSPRFSIAHEWRPALLLRASTRLIQGLLQSCYQFLMGWNVIHASENKNLFYASKKRK
PLTPSLKSGSYDKDGKRSLEGSPGAKGTLDNYLVTSQDHGNSDNPSHSVRENLSGQGLVKRNLLLKINSSSKNEHEEPTLSRGCHTSEAAEGIKKRTLEDSYETRSSAVK
SMASDWGIAPCTEKPELKQFAADFLSLYCRYM

Spg025504 (gene) of Sponge gourd (cylindrica) v1 genome