; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025509 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025509
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold13:28919430..28921994
RNA-Seq ExpressionSpg025509
SyntenySpg025509
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]1.9e-3655.47Show/hide
Query:  MEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWT
        +EV +G    RV+L+ RTC C+EF+Y+++PCSHAIA A  R VN  TLCSPAY ++++I +YA+ +YP+G   +W  P +F +  +  P+ V R+GRR T
Subjt:  MEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWT

Query:  VRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        VRIPSAGE    +QVHKCGRCGN+GHNRKTCR+PL T
Subjt:  VRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]3.9e-3755.47Show/hide
Query:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV
        EV++G    RV+++ +TCTC++F YYEIPCSHAIA A  RN++V TLCS  Y I+++I +Y EP+YP+G   +W  P ++    I PP+ V RVGR  T 
Subjt:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV

Query:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
        RIPS GE   ++QVHKCGRCGN+GHN KTCR+PL TT
Subjt:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]7.2e-1533.91Show/hide
Query:  GVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKDVHGSGS
        G W E    YEGG + GL+V+  I Y + +  ++ ++ INPD F+++++C+Y F  +  VP + I +D  L F+L G    S++PLY+S++PK+   SGS
Subjt:  GVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKDVHGSGS

Query:  NLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAEN-IPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDEN
        N  SH    +  ++ F   P    Q VP     N + SSI + HP   +V   TP+++  VP +L DD   +FG  +++  GDD            ED  
Subjt:  NLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAEN-IPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDEN

Query:  WEYNKEDEELDESYEE-ESEADEFEEVDGYDDD
        +    +D E D+ Y+E ESE D   +   YD D
Subjt:  WEYNKEDEELDESYEE-ESEADEFEEVDGYDDD

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]6.7e-3755.97Show/hide
Query:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV
        +V++G     V+L+ +TCTC++F+Y+EIPCSHAIA A  RN++V +LCS  Y IE++IL YAEP+YP+G   +W  P ++    I PPK V  VGR  T 
Subjt:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV

Query:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPL
        RIPSAGE   ++QVHKCGRCGN+GHNR+TCR+PL
Subjt:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPL

XP_022155156.1 uncharacterized protein LOC111022299 [Momordica charantia]4.6e-3857.66Show/hide
Query:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV
        EV++G    RV+L+ ++CTC++F+YY+IPCSHA+ A   RNV++ TLCSP Y +E+++ +YAEPIYP+G   +W  P +F E  I PPK VARVGRR TV
Subjt:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV

Query:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
        RIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Subjt:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]7.9e-3856.52Show/hide
Query:  RMEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRW
        ++EV +G    RV+L+ RTC C+EF+Y++ PCSHAIAA    NVN  TLCSPAY I+++I +Y EP+YP+G   +W  P +F +  + PP+ V+RVGRR 
Subjt:  RMEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRW

Query:  TVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  TVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

TrEMBL top hitse value%identityAlignment
A0A6J1DK28 uncharacterized protein LOC1110207879.4e-3755.47Show/hide
Query:  MEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWT
        +EV +G    RV+L+ RTC C+EF+Y+++PCSHAIA A  R VN  TLCSPAY ++++I +YA+ +YP+G   +W  P +F +  +  P+ V R+GRR T
Subjt:  MEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWT

Query:  VRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        VRIPSAGE    +QVHKCGRCGN+GHNRKTCR+PL T
Subjt:  VRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DLB0 uncharacterized protein LOC1110219691.9e-3755.47Show/hide
Query:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV
        EV++G    RV+++ +TCTC++F YYEIPCSHAIA A  RN++V TLCS  Y I+++I +Y EP+YP+G   +W  P ++    I PP+ V RVGR  T 
Subjt:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV

Query:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
        RIPS GE   ++QVHKCGRCGN+GHN KTCR+PL TT
Subjt:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DLB0 uncharacterized protein LOC1110219693.5e-1533.91Show/hide
Query:  GVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKDVHGSGS
        G W E    YEGG + GL+V+  I Y + +  ++ ++ INPD F+++++C+Y F  +  VP + I +D  L F+L G    S++PLY+S++PK+   SGS
Subjt:  GVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPLYLSMIPKDVHGSGS

Query:  NLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAEN-IPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDEN
        N  SH    +  ++ F   P    Q VP     N + SSI + HP   +V   TP+++  VP +L DD   +FG  +++  GDD            ED  
Subjt:  NLGSHSHIPHTLSQPFPQPPPSFAQTVPYNLAEN-IPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDEN

Query:  WEYNKEDEELDESYEE-ESEADEFEEVDGYDDD
        +    +D E D+ Y+E ESE D   +   YD D
Subjt:  WEYNKEDEELDESYEE-ESEADEFEEVDGYDDD

A0A6J1DLB0 uncharacterized protein LOC1110219693.2e-3755.97Show/hide
Query:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV
        +V++G     V+L+ +TCTC++F+Y+EIPCSHAIA A  RN++V +LCS  Y IE++IL YAEP+YP+G   +W  P ++    I PPK V  VGR  T 
Subjt:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV

Query:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPL
        RIPSAGE   ++QVHKCGRCGN+GHNR+TCR+PL
Subjt:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPL

A0A6J1DQV1 uncharacterized protein LOC1110222992.2e-3857.66Show/hide
Query:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV
        EV++G    RV+L+ ++CTC++F+YY+IPCSHA+ A   RNV++ TLCSP Y +E+++ +YAEPIYP+G   +W  P +F E  I PPK VARVGRR TV
Subjt:  EVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTV

Query:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
        RIPSAGE    QQ+HK  RCG   HNRKTCR+PL TT
Subjt:  RIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DRF6 uncharacterized protein LOC1110236643.8e-3856.52Show/hide
Query:  RMEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRW
        ++EV +G    RV+L+ RTC C+EF+Y++ PCSHAIAA    NVN  TLCSPAY I+++I +Y EP+YP+G   +W  P +F +  + PP+ V+RVGRR 
Subjt:  RMEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRW

Query:  TVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  TVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64255.1 MuDR family transposase2.7e-0432.05Show/hide
Query:  VDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPP
        V L   +CTC +F+ Y+ PC HA+A  +    N        Y +E +  +YA     V  MS W  P       +LPP
Subjt:  VDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPP

AT1G64260.1 MuDR family transposase3.4e-0731.25Show/hide
Query:  VDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKR
        V L++ TCTCR+F+ Y+ PC HA+A      +N        Y +E    +YA    PV  ++ W  P + +   + PP +
Subjt:  VDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEPIYPVGPMSEWKRPAEFQEMEILPPKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCTGGATTGGATGTGAATATTGACATAAGGTATGAAGA
GTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAA
ATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTCCGAAAGATGTTCATGGTAGTGGCAGTAACTTAGGTAGT
CATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTC
GTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATT
TGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACAAGGAGGATGAAGAATTAGATGAATCATACGAA
GAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGTTATGATGATGACGTTGCAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGGA
AGATGTTGCTCCTCTTGCTTCTAGAATGGAAGTATACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGA
TTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACATAGAATCTGTGATCCTATCATACGCAGAACCG
ATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGATGGACTGTTCG
AATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAAGGTGGCTATTTAGCTGGATTGGATGTGAATATTGACATAAGGTATGAAGA
GTTTTTAAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAA
ATGATAGAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTCCGAAAGATGTTCATGGTAGTGGCAGTAACTTAGGTAGT
CATAGCCATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTC
GTATCATCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATT
TGTATACTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACAAGGAGGATGAAGAATTAGATGAATCATACGAA
GAAGAATCTGAAGCAGATGAATTTGAGGAAGTAGATGGTTATGATGATGACGTTGCAGTAGATGGAGTTGAGGCAGATGGTGGGACAGATGGAGGCAACGAAGTTGAGGA
AGATGTTGCTCCTCTTGCTTCTAGAATGGAAGTATACGAAGGACAACTAGACTTTCGTGTCGACTTGCACATGAGGACGTGCACTTGTCGAGAGTTTGAGTACTACGAGA
TTCCATGCTCTCATGCAATCGCCGCAGCCCGAGACCGTAATGTTAATGTGGCCACTCTTTGTTCCCCTGCATATCACATAGAATCTGTGATCCTATCATACGCAGAACCG
ATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGAGATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGATGGACTGTTCG
AATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTGGTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACAT
GA
Protein sequenceShow/hide protein sequence
MPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMIPKDVHGSGSNLGS
HSHIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDENWEYNKEDEELDESYE
EESEADEFEEVDGYDDDVAVDGVEADGGTDGGNEVEEDVAPLASRMEVYEGQLDFRVDLHMRTCTCREFEYYEIPCSHAIAAARDRNVNVATLCSPAYHIESVILSYAEP
IYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRWTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT