; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025514 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025514
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleic acid-binding, OB-fold-like protein
Genome locationscaffold13:28964254..28967690
RNA-Seq ExpressionSpg025514
SyntenySpg025514
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142984.1 uncharacterized protein At4g28440 [Cucumis sativus]2.5e-33100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
XP_008444320.1 PREDICTED: uncharacterized protein At4g28440 isoform X2 [Cucumis melo]3.9e-34100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQG
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQG
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQG
XP_022131585.1 uncharacterized protein At4g28440-like [Momordica charantia]7.3e-3398.65Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
XP_022951207.1 uncharacterized protein At4g28440-like [Cucurbita moschata]2.5e-33100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
XP_038883981.1 uncharacterized protein At4g28440 [Benincasa hispida]3.3e-3398.65Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
TrEMBL top hitse value%identityAlignment
A0A0A0LNA1 Uncharacterized protein1.2e-33100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
A0A1S3BA24 uncharacterized protein At4g28440 isoform X11.2e-33100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
A0A1S3BAV0 uncharacterized protein At4g28440 isoform X21.9e-34100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQG
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQG
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQG
A0A5A7V0K6 Nucleic acid-binding protein1.2e-33100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
A0A6J1KS21 uncharacterized protein At4g28440-like1.2e-33100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284408.4e-1659.72Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQ
        RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDETG I+FTARNDQ
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQ
Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein2.0e-2878.95Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
AT1G10590.2 Nucleic acid-binding, OB-fold-like protein2.0e-2878.95Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQ
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.2e-2877.92Show/hide
Query:  EMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        +MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQ
Subjt:  EMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
AT1G23750.1 Nucleic acid-binding, OB-fold-like protein3.1e-2978.67Show/hide
Query:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+VGDETG+I+FTARNDQ
Subjt:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
AT2G33845.1 Nucleic acid-binding, OB-fold-like protein3.2e-1867.16Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ
        +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+FTARNDQ
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGTAGAGCTTCATTAGAGTTGAAACACATTCCAAAAAGTCTGGAGTTCCAGGGGGATCTCGCTGATAAGACTAGTTTGACGGCTACGTTTCTCAAACCAGATCG
GCTTCCCTTTTCCCCCTTCGTCTTTGCCTCTACCACTCGTAAAAGGTGTGAGAACAGTAATGTTCTGGTATTCGGTGAAATGGCAGAATCAAAACCTGGACTGAGGAAAC
CAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGGCATACTCTTACAGTCAAGGTTGTGAATACTAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCT
CAAGCCCGTCAGATGCGAATTGCTGAATGCTTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGGTAAATTTCAACAATATTTGAGACTGCA
CTGTTTACATATTTGTATCTTGTGCGAAGCATGCAAGTTTTCTTTTTTATGCTTACATTCTGTACATGATACCAAAAATTGGACATTAATTGGTTCTCTATATCCACATG
CGACAGAAGAGGTGCAGGTAAGAGTTTTCATACCTGATATATATCATGTGTTCTCACTCCTTTTCCACAATGTAATTACATATTTCACTGTGAAAGGTAAAGGTTGTTTT
GATATATTCACCTCCTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGGTAGAGCTTCATTAGAGTTGAAACACATTCCAAAAAGTCTGGAGTTCCAGGGGGATCTCGCTGATAAGACTAGTTTGACGGCTACGTTTCTCAAACCAGATCG
GCTTCCCTTTTCCCCCTTCGTCTTTGCCTCTACCACTCGTAAAAGGTGTGAGAACAGTAATGTTCTGGTATTCGGTGAAATGGCAGAATCAAAACCTGGACTGAGGAAAC
CAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGGCATACTCTTACAGTCAAGGTTGTGAATACTAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCT
CAAGCCCGTCAGATGCGAATTGCTGAATGCTTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGGTAAATTTCAACAATATTTGAGACTGCA
CTGTTTACATATTTGTATCTTGTGCGAAGCATGCAAGTTTTCTTTTTTATGCTTACATTCTGTACATGATACCAAAAATTGGACATTAATTGGTTCTCTATATCCACATG
CGACAGAAGAGGTGCAGGTAAGAGTTTTCATACCTGATATATATCATGTGTTCTCACTCCTTTTCCACAATGTAATTACATATTTCACTGTGAAAGGTAAAGGTTGTTTT
GATATATTCACCTCCTACTAG
Protein sequenceShow/hide protein sequence
MIGRASLELKHIPKSLEFQGDLADKTSLTATFLKPDRLPFSPFVFASTTRKRCENSNVLVFGEMAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGP
QARQMRIAECLVGDETGMIIFTARNDQGKFQQYLRLHCLHICILCEACKFSFLCLHSVHDTKNWTLIGSLYPHATEEVQVRVFIPDIYHVFSLLFHNVITYFTVKGKGCF
DIFTSY