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Spg025516 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025516
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionL-tryptophan--pyruvate aminotransferase 1-like
Genome locationscaffold13:30028544..30030346
RNA-Seq ExpressionSpg025516
SyntenySpg025516
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0008483 - transaminase activity (molecular function)
GO:0016846 - carbon-sulfur lyase activity (molecular function)
InterPro domainsIPR006948 - Alliinase, C-terminal
IPR015421 - Pyridoxal phosphate-dependent transferase, major domain
IPR015424 - Pyridoxal phosphate-dependent transferase
IPR037029 - Alliinase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585175.1 L-tryptophan--pyruvate aminotransferase 1, partial [Cucurbita argyrosperma subsp. sororia]6.8e-3776.7Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALSTPASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

KAG7020095.1 L-tryptophan--pyruvate aminotransferase 1 [Cucurbita argyrosperma subsp. argyrosperma]6.8e-3776.7Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALSTPASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

XP_022951500.1 L-tryptophan--pyruvate aminotransferase 1-like [Cucurbita moschata]6.8e-3776.7Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALSTPASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

XP_023002852.1 L-tryptophan--pyruvate aminotransferase 1-like [Cucurbita maxima]2.6e-3675.73Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALS PASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

XP_023538054.1 L-tryptophan--pyruvate aminotransferase 1-like [Cucurbita pepo subsp. pepo]6.8e-3776.7Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALSTPASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

TrEMBL top hitse value%identityAlignment
A0A5N6R1Z7 Alliinase_C domain-containing protein9.6e-2962.38Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY
        G+PT FE +W++MGDKC+VVI G DLMSY +  G VCWFL  EL D I RLHR++ N V E+RH+V+GT STQLFQA LYAL+TPA +  ++VV +APYY
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY

Query:  S
        S
Subjt:  S

A0A6J1BPR8 L-tryptophan--pyruvate aminotransferase 1-like isoform X22.2e-3371.43Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASL----KLINVVFA
        G PTVFE YW+RMGDKCRVVI GCDLMSYRAT   +CW+LL ELE+ I RLHR++ N VV+ERHVV+GT STQLFQA LYALSTPA+     + INVV A
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASL----KLINVVFA

Query:  APYYS
        APYYS
Subjt:  APYYS

A0A6J1BQA4 L-tryptophan--pyruvate aminotransferase 1-like isoform X11.7e-3370.75Show/hide
Query:  AGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASL----KLINVVF
        +G PTVFE YW+RMGDKCRVVI GCDLMSYRAT   +CW+LL ELE+ I RLHR++ N VV+ERHVV+GT STQLFQA LYALSTPA+     + INVV 
Subjt:  AGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASL----KLINVVF

Query:  AAPYYS
        AAPYYS
Subjt:  AAPYYS

A0A6J1GIY6 L-tryptophan--pyruvate aminotransferase 1-like3.3e-3776.7Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALSTPASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

A0A6J1KKQ5 L-tryptophan--pyruvate aminotransferase 1-like1.3e-3675.73Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        GNPTVFE YW+RMGDKCRVVIPGC+LMSY+A    GKVCWFLL ELED I RLHRL+ N VV++R++V+GT STQL+QA LYALS PASLK INVV AAP
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRAT--KGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYS
        YYS
Subjt:  YYS

SwissProt top hitse value%identityAlignment
Q0DKE8 Tryptophan aminotransferase-related protein 11.7e-2251.96Show/hide
Query:  GNPTVFEAYWK-RMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPY
        G+PT++EA+W+   G++  +VIPG   MSY +  G +CWFL   LE  + RLHRL+ N V +  HV++GT STQLFQA LYALS P     +NVV  APY
Subjt:  GNPTVFEAYWK-RMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPY

Query:  YS
        YS
Subjt:  YS

Q5VQG8 Tryptophan aminotransferase-related protein 24.2e-2149.52Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASL----KLINVVFA
        G+PT+FE +W+  GD   VVIPG   MSY +    VCWFL  EL+  + RLHR++ N  V+  HV++GT STQLF A LYAL+  A+     + I+VV  
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASL----KLINVVFA

Query:  APYYS
        APYYS
Subjt:  APYYS

Q94A02 Tryptophan aminotransferase-related protein 28.4e-2246.02Show/hide
Query:  KAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        K G+PTV+E YW+  G+   +VIPG   +SY + +  +CWFL  EL   I R+H+++ N V ++R +V+GT STQL+QA LYALS       INVV A P
Subjt:  KAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYSVRKRTFPTLS
        YYS    T+P ++
Subjt:  YYSVRKRTFPTLS

Q9LR29 Tryptophan aminotransferase-related protein 15.8e-2351.49Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY
        G+PT F+ YW +  D+C VVIP  DLMSY +    VCWFL  ELE  I  LH  I N   EER++V+GT S+QL QA L+ALS+ + +K +++V A PYY
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY

Query:  S
        S
Subjt:  S

Q9S7N2 L-tryptophan--pyruvate aminotransferase 14.8e-2552.48Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY
        G+PT +E YW++MGD+C V I GCDLMSY +    +CWFL  ELED I  LH ++ N   E+R++V+GT STQL QA ++ALS+ A  + ++VV AAP+Y
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY

Query:  S
        S
Subjt:  S

Arabidopsis top hitse value%identityAlignment
AT1G23320.1 tryptophan aminotransferase related 14.1e-2451.49Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY
        G+PT F+ YW +  D+C VVIP  DLMSY +    VCWFL  ELE  I  LH  I N   EER++V+GT S+QL QA L+ALS+ + +K +++V A PYY
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY

Query:  S
        S
Subjt:  S

AT1G34060.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein9.9e-1031.78Show/hide
Query:  AGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALS-TPASLKL-INVVFAA
        +G+P   E +W R  ++  +++ G   MSY    G    ++  ELE  I +LH ++ N V + R V+ G+ +TQL  A ++ALS T +S+     ++ + 
Subjt:  AGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALS-TPASLKL-INVVFAA

Query:  PYYSVRK
        PYY++ K
Subjt:  PYYSVRK

AT1G70560.1 tryptophan aminotransferase of Arabidopsis 13.4e-2652.48Show/hide
Query:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY
        G+PT +E YW++MGD+C V I GCDLMSY +    +CWFL  ELED I  LH ++ N   E+R++V+GT STQL QA ++ALS+ A  + ++VV AAP+Y
Subjt:  GNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAPYY

Query:  S
        S
Subjt:  S

AT4G24670.1 tryptophan aminotransferase related 26.0e-2346.02Show/hide
Query:  KAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        K G+PTV+E YW+  G+   +VIPG   +SY + +  +CWFL  EL   I R+H+++ N V ++R +V+GT STQL+QA LYALS       INVV A P
Subjt:  KAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYSVRKRTFPTLS
        YYS    T+P ++
Subjt:  YYSVRKRTFPTLS

AT4G24670.2 tryptophan aminotransferase related 26.0e-2346.02Show/hide
Query:  KAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP
        K G+PTV+E YW+  G+   +VIPG   +SY + +  +CWFL  EL   I R+H+++ N V ++R +V+GT STQL+QA LYALS       INVV A P
Subjt:  KAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVLYALSTPASLKLINVVFAAP

Query:  YYSVRKRTFPTLS
        YYS    T+P ++
Subjt:  YYSVRKRTFPTLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAAAGAACAAGAACTCGAAATGCAAATGGAGAATCAATGAATGGAAGCAGGAGGGAGATTGGAAACTGGGAGTGGTTAAAAAGGCGGGGAATCCGACGGTGTT
CGAGGCATATTGGAAGAGGATGGGAGACAAGTGTAGGGTGGTGATCCCAGGGTGTGATTTGATGAGCTACAGAGCCACCAAGGGAAAAGTTTGTTGGTTTCTATTGCTGG
AATTGGAGGACACCATTGCCAGATTGCATCGACTCATCGACAACGTCGTGGTTGAAGAAAGACATGTCGTCATGGGGACCAACTCTACACAGCTCTTCCAGGCTGTCCTT
TATGCTCTTTCTACTCCTGCGTCCCTCAAACTTATTAACGTCGTTTTTGCTGCTCCTTACTACTCGGTCCGAAAAAGAACCTTCCCCACTCTTTCTTTTTCTGCTCGATT
TTGCGATCGAACTGAATGTCAAGACATAAATTCTCCATGTCCTGTCTTTTCTTTGCTACAATACTGTCTTTCCTCTGCTACAGTTGTGAGTGGCTCAGAGTTGGTGTTGA
GTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGAAAGAACAAGAACTCGAAATGCAAATGGAGAATCAATGAATGGAAGCAGGAGGGAGATTGGAAACTGGGAGTGGTTAAAAAGGCGGGGAATCCGACGGTGTT
CGAGGCATATTGGAAGAGGATGGGAGACAAGTGTAGGGTGGTGATCCCAGGGTGTGATTTGATGAGCTACAGAGCCACCAAGGGAAAAGTTTGTTGGTTTCTATTGCTGG
AATTGGAGGACACCATTGCCAGATTGCATCGACTCATCGACAACGTCGTGGTTGAAGAAAGACATGTCGTCATGGGGACCAACTCTACACAGCTCTTCCAGGCTGTCCTT
TATGCTCTTTCTACTCCTGCGTCCCTCAAACTTATTAACGTCGTTTTTGCTGCTCCTTACTACTCGGTCCGAAAAAGAACCTTCCCCACTCTTTCTTTTTCTGCTCGATT
TTGCGATCGAACTGAATGTCAAGACATAAATTCTCCATGTCCTGTCTTTTCTTTGCTACAATACTGTCTTTCCTCTGCTACAGTTGTGAGTGGCTCAGAGTTGGTGTTGA
GTAGTTGA
Protein sequenceShow/hide protein sequence
MKRKNKNSKCKWRINEWKQEGDWKLGVVKKAGNPTVFEAYWKRMGDKCRVVIPGCDLMSYRATKGKVCWFLLLELEDTIARLHRLIDNVVVEERHVVMGTNSTQLFQAVL
YALSTPASLKLINVVFAAPYYSVRKRTFPTLSFSARFCDRTECQDINSPCPVFSLLQYCLSSATVVSGSELVLSS