CuGenDBv2

Gene ID	Spg025551
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	selenoprotein H-like
Genome location	scaffold13:31243211..31248418
RNA-Seq Expression	Spg025551
Synteny	Spg025551
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	IPR011893 - Selenoprotein, Rdx-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6598818.1 hypothetical protein SDJN03_08596, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-69

82.58

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Query:  MAPKKRTKTQEGEPAAA--KPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCK
        MAP+KR+K QE EPAAA  KPAP SS VTR S RLA NSK DL  EE V ELPKSKK KRAPKENGKA+EVGNEGEE+DAAS+KL +D+K RTVVIE CK
Subjt:  MAPKKRTKTQEGEPAAA--KPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCK

Query:  QCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QCQSFKKRAIQVQ+GLENGV GITVLLNP+KPR+GCFEIRS+DGEKFISLLDMKRPFTRMKEL+MEEVISDIIEKIKG
Subjt:  QCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

XP_022950994.1 selenoprotein H-like isoform X1 [Cucurbita moschata]

1.2e-70

83.52

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E A AKP PASSRVTR S RLA NSK DL  EE V +LPK KKAKR PKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

XP_023002520.1 selenoprotein H-like isoform X1 [Cucurbita maxima]

2.6e-70

83.52

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP P SSRVTR S RLAANSK DL  EEPV +LPK KKAKRAPKEN KAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRA++VQ GLE GVPGITVLLNPDK RRGCFEIRSEDGEKFISLLDMKRPFT+MKELDMEEVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]

7.3e-73

85.8

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP PASSR TR S RLAANSK DL  EEPV +LPK KKAKRAPKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRAI+VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

XP_038886764.1 selenoprotein H [Benincasa hispida]

3.4e-70

84.66

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAP+KR+K QE EPAA K APASSRVTRSSARLAANSK D   +E V E  KSKKAKRAPKENGK +EV NEG EVDAA EKL +D K RTVVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRAIQVQ GLENGVPGITV+LNPD PRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC9 Uncharacterized protein

1.4e-66

81.25

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAP+KRTK QE +    KPAPA+SR+TRSSARLAANSK DL     V ELPKSKKAKRAPKENGK EEV N+  +VD    KL +D+K RTVVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

A0A1S3BBW1 selenoprotein H

1.7e-67

82.39

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAP+KR+K QE E A  KPAPA+SRVTRSSARLAANSK DL     V ELPKSKKAKRAPKENGK EEV N+  +VD   EK  +D+K RTVVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKELDM+EVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

A0A6J1GHF7 selenoprotein H-like isoform X1

5.7e-71

83.52

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E A AKP PASSRVTR S RLA NSK DL  EE V +LPK KKAKR PKENGKAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

A0A6J1K9R2 selenoprotein H-like

1.5e-68

81.01

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Query:  MAPKKRTKTQEGEPAAA---KPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHC
        MAP+KR+K QE +PAAA   KPAP SS VTR S RLA NS  DL  EE V ELPKSKK KRAPKENGKA+EVGNEGEE+DAAS+KL +D+K RTVVIE C
Subjt:  MAPKKRTKTQEGEPAAA---KPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHC

Query:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        KQCQSFKKRAIQVQ+GLENGV GITVLLNP+KPR+GCFEIRS+DGEKFISLLDMKRPFTRMKEL+MEEVISDIIEKIKG
Subjt:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

A0A6J1KP64 selenoprotein H-like isoform X1

1.3e-70

83.52

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Query:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC
        MAPKKR+K QE E AAAKP P SSRVTR S RLAANSK DL  EEPV +LPK KKAKRAPKEN KAEEV NEGE++DAASEKLG ++K R VVIEHCKQC
Subjt:  MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG
        QSFKKRA++VQ GLE GVPGITVLLNPDK RRGCFEIRSEDGEKFISLLDMKRPFT+MKELDMEEVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

SwissProt top hits

e value

%identity

Alignment

Q3UQA7 Selenoprotein H

3.6e-06

31.53

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Query:  NGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI---RSEDGEKFISLLDMKRPFTRMK
        +G+  + G    E     EKL E   G TVVIEHC   + + + A  +   L+   P + V +NP KPRRG FE+   RS++    +     K P  ++K
Subjt:  NGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI---RSEDGEKFISLLDMKRPFTRMK

Query:  ELDMEEVISDI
          + +EV+ ++
Subjt:  ELDMEEVISDI

Q8IZQ5 Selenoprotein H

1.2e-04

30.28

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Query:  KAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIR--SEDGEKFISLLDMKR-PFTRMKEL
        K E++ N GE ++ A           TVVIEHC   + + + A  +   L    P + V +NP KPRRG FE+     DG        +K+ P  ++K  
Subjt:  KAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIR--SEDGEKFISLLDMKR-PFTRMKEL

Query:  DMEEVISDI
        + +EV+ ++
Subjt:  DMEEVISDI

Arabidopsis top hits

e value

%identity

Alignment

AT2G24440.1 selenium binding

3.8e-35

51.37

Show/hide

Query:  MAPKKRTKTQEGEPAA-AKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKR--APKENGKAEEVG-----NEGEEVDAASEKLGEDSKGRTV
        MA KK     +G+  A  +   +  R TRS  +   +S   +  E P  +  K+ KAK   A K+  K EEV       E E+ DAA ++  +DS  + +
Subjt:  MAPKKRTKTQEGEPAA-AKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKR--APKENGKAEEVG-----NEGEEVDAASEKLGEDSKGRTV

Query:  VIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK
        VIEHCKQC+SFK+RA +V+ GLE  VPGI V +NPDKPRRGCFEIR E GE FISLL MKRPFT MKEL+MEEVI+DI+EKIK
Subjt:  VIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK

AT4G31360.1 selenium binding

1.6e-33

50.27

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Query:  PKKRTKTQEGEPAAAKPAPASSRVTRS-SARLAANSKTDLPAEEPVAELPKSKKAKR--------APKENGKAEEVGNEGEEVDAASEKLG---EDSKGR
        P K++K    E A      ASSRVTRS  +R  + ++ +       A  P +KKAKR          K+  K EEV    E V+   EK     ED    
Subjt:  PKKRTKTQEGEPAAAKPAPASSRVTRS-SARLAANSKTDLPAEEPVAELPKSKKAKR--------APKENGKAEEVGNEGEEVDAASEKLG---EDSKGR

Query:  TVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK
         +VIEHCKQC +FK RAIQV+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL+MKRPF  MK LDMEEVI DII+K+K
Subjt:  TVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIK

Sequences

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CDS sequence

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ATGGCGCCCAAGAAGCGAACCAAGACCCAAGAAGGCGAGCCGGCGGCGGCCAAGCCGGCTCCGGCGTCGTCGAGGGTCACTCGGAGCTCGGCCCGGCTGGCGGCGAACTC
CAAGACTGATTTGCCGGCGGAGGAGCCTGTGGCGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGCGGAGGAGGTTGGAAATGAGGGGG
AGGAAGTCGATGCTGCTTCGGAGAAGCTTGGCGAGGATTCCAAGGGCAGAACGGTTGTGATTGAACATTGCAAGCAGTGCCAATCGTTCAAGAAAAGGGCCATCCAAGTG
CAAACTGGTCTAGAGAATGGTGTTCCTGGTATCACTGTGTTACTCAATCCTGATAAGCCAAGAAGGGGATGCTTTGAAATTCGGAGTGAAGATGGCGAGAAGTTTATCAG
TCTACTGGACATGAAGCGACCGTTTACTCGTATGAAGGAACTGGACATGGAGGAAGTTATTTCAGATATCATTGAGAAGATAAAAGGATGA

mRNA sequence

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Protein sequence

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MAPKKRTKTQEGEPAAAKPAPASSRVTRSSARLAANSKTDLPAEEPVAELPKSKKAKRAPKENGKAEEVGNEGEEVDAASEKLGEDSKGRTVVIEHCKQCQSFKKRAIQV
QTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELDMEEVISDIIEKIKG

Spg025551 (gene) of Sponge gourd (cylindrica) v1 genome