; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025564 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025564
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationscaffold13:32321438..32325757
RNA-Seq ExpressionSpg025564
SyntenySpg025564
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034608.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-2682.28Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGISLLL
        S RLTN AKVKS  SPF IP+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWT EG  +LL
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGISLLL

XP_022142284.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]2.4e-2685.14Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPEG
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG

XP_022142288.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X4 [Momordica charantia]2.4e-2685.14Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPEG
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG

XP_038880785.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X1 [Benincasa hispida]7.1e-2683.78Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S+RLTN AK+KS+ SPF IP+QNPLSQSHRILRSP+E+S CVESLLPYHSATA ALLTSML VSRRSYGWTPEG
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG

XP_038880792.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X4 [Benincasa hispida]7.1e-2683.78Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S+RLTN AK+KS+ SPF IP+QNPLSQSHRILRSP+E+S CVESLLPYHSATA ALLTSML VSRRSYGWTPEG
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG

TrEMBL top hitse value%identityAlignment
A0A6J1CKI3 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X27.7e-2684.93Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPE
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPE
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPE

A0A6J1CL53 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.2e-2685.14Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPEG
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG

A0A6J1CL58 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X57.7e-2684.93Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPE
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPE
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPE

A0A6J1CMC1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X37.7e-2684.93Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPE
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPE
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPE

A0A6J1CMX8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X41.2e-2685.14Show/hide
Query:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S RLT  AKVKS+ SPFG+P+QNPLSQSHRILRSP+EMS CVESLLPYHSATA ALLTSML VSRRSYGWTPEG
Subjt:  SSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial8.2e-0960Show/hide
Query:  RQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGW
        R++PL      LR+P+E+S+CVESLLPYHSATA AL+TS L +S ++YGW
Subjt:  RQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGW

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein1.3e-1256.25Show/hide
Query:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGI
        S+ + F +P+Q+PL  ++RI RSP+E+S CVE++LPYH+ATA ALL SML VSRR  GW  +G+
Subjt:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGI

AT1G28395.2 unknown protein1.3e-1256.25Show/hide
Query:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGI
        S+ + F +P+Q+PL  ++RI RSP+E+S CVE++LPYH+ATA ALL SML VSRR  GW  +G+
Subjt:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGI

AT1G28395.3 unknown protein1.3e-1256.25Show/hide
Query:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGI
        S+ + F +P+Q+PL  ++RI RSP+E+S CVE++LPYH+ATA ALL SML VSRR  GW  +G+
Subjt:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEGI

AT2G33847.1 unknown protein1.3e-1263.33Show/hide
Query:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWT
        S+ S F +P+Q+PL  SHRI RSP+E+S CVE++LPYH+ATA ALL SML VS RS  WT
Subjt:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWT

AT2G33847.2 unknown protein2.5e-1361.9Show/hide
Query:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG
        S+ S F +P+Q+PL  SHRI RSP+E+S CVE++LPYH+ATA ALL SML VS RS  WT +G
Subjt:  SSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLYVSRRSYGWTPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATAATGTATCTGCATATAACTTGGGAGATGATGTAGACCATGCTTGGGGGGAATTGAGAGATGAAGTGTTGGAAGTAGATGAAGATGATGACTGGAGTGTGGA
TAGAGACGATGAGTCAAATGTAGATGTAGATTACGATGAGGATAGAGATGATGGACTTGATGAGCCAGAAGGCATAAAACCCAACAATGGTCATAGGGAGGCCCCGCCTG
CTAATGCAACTGTAGCTCCACCTGCTAATGCATCTGAAGCTTCACCTGCTAATGCATCTGAAGCTCCACCTGTTAATGCACCTGAGGTTATGCATGCATCAATTTCGATC
GCCCCACGAACTTCTGTGACAGCTCCATCAGGTAACTCAATTGTCATGTCTGGTCAGTTGATTAACTTGGTTAATGAGTTAACAAATGTTCTTCCTCTCAACGCATTGTT
TTTTTTTCCTCCTCCTCCTCTTCTCTTCTTCTTCTCCAGCAGACTTACCAACGATGCCAAAGTGAAATCCTCCCATTCTCCGTTCGGCATCCCCAGGCAGAACCCACTCT
CCCAATCCCATCGCATTTTGAGGTCTCCAATTGAAATGAGTTACTGTGTGGAATCCTTGCTTCCTTACCACTCTGCTACTGCCTTTGCATTGCTTACGTCTATGCTTTAT
GTTTCTCGTCGGAGCTACGGTTGGACTCCAGAAGGTATTTCCTTGCTCTTATTATTGAATTGTTATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATAATGTATCTGCATATAACTTGGGAGATGATGTAGACCATGCTTGGGGGGAATTGAGAGATGAAGTGTTGGAAGTAGATGAAGATGATGACTGGAGTGTGGA
TAGAGACGATGAGTCAAATGTAGATGTAGATTACGATGAGGATAGAGATGATGGACTTGATGAGCCAGAAGGCATAAAACCCAACAATGGTCATAGGGAGGCCCCGCCTG
CTAATGCAACTGTAGCTCCACCTGCTAATGCATCTGAAGCTTCACCTGCTAATGCATCTGAAGCTCCACCTGTTAATGCACCTGAGGTTATGCATGCATCAATTTCGATC
GCCCCACGAACTTCTGTGACAGCTCCATCAGGTAACTCAATTGTCATGTCTGGTCAGTTGATTAACTTGGTTAATGAGTTAACAAATGTTCTTCCTCTCAACGCATTGTT
TTTTTTTCCTCCTCCTCCTCTTCTCTTCTTCTTCTCCAGCAGACTTACCAACGATGCCAAAGTGAAATCCTCCCATTCTCCGTTCGGCATCCCCAGGCAGAACCCACTCT
CCCAATCCCATCGCATTTTGAGGTCTCCAATTGAAATGAGTTACTGTGTGGAATCCTTGCTTCCTTACCACTCTGCTACTGCCTTTGCATTGCTTACGTCTATGCTTTAT
GTTTCTCGTCGGAGCTACGGTTGGACTCCAGAAGGTATTTCCTTGCTCTTATTATTGAATTGTTATGTGTAA
Protein sequenceShow/hide protein sequence
MSNNVSAYNLGDDVDHAWGELRDEVLEVDEDDDWSVDRDDESNVDVDYDEDRDDGLDEPEGIKPNNGHREAPPANATVAPPANASEASPANASEAPPVNAPEVMHASISI
APRTSVTAPSGNSIVMSGQLINLVNELTNVLPLNALFFFPPPPLLFFFSSRLTNDAKVKSSHSPFGIPRQNPLSQSHRILRSPIEMSYCVESLLPYHSATAFALLTSMLY
VSRRSYGWTPEGISLLLLLNCYV