; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025566 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025566
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationscaffold13:31573398..31575675
RNA-Seq ExpressionSpg025566
SyntenySpg025566
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +SSR C  ARVW  SS+ LRS N NS  FSSASM+ES ES+SVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +SSR C  ARVW  SS+ LRS N NS  FSSASM+ES ES+SVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]6.6e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S R C  ARVW  SS+ LRS N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]1.7e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]1.7e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase3.2e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S R C  ARVW  SS+ LRS N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase3.2e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S R C  ARVW  SS+ LRS N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1HBR1 Aminoacyl-tRNA hydrolase2.4e-7582.54Show/hide
Query:  MTSVTSASRLTFSIPDSSRF--CSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQG
        M SV SASR TFSI  S++   CSR+RVW SSSLSLRS NRNSN FSS SM+ES ESNS  P DD     E+TADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTSVTSASRLTFSIPDSSRF--CSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        CHASVSA+WLNKDDPHT EYCSP NIDSMHKVTLEVKGETQIVNLSEKL+ANSI HKLWIEQPENIPTCLATKPY KSVVSAFFKKLKL
Subjt:  CHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase8.4e-8186.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1KTS0 Aminoacyl-tRNA hydrolase8.4e-8186.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD11.1e-2447.86Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYLKSVVSAFFKKLKL
        +PY K  VS + KK +L
Subjt:  KPYLKSVVSAFFKKLKL

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD11.1e-2650.43Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYLKSVVSAFFKKLKL
        +PY K  VS + KK +L
Subjt:  KPYLKSVVSAFFKKLKL

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD17.0e-2447.01Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYLKSVVSAFFKKLKL
        +PY K  V  + KK +L
Subjt:  KPYLKSVVSAFFKKLKL

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein8.1e-5270.14Show/hide
Query:  FSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNL
        F++AS + S ++  +  + D  + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGCHASV+AIW  KDDP T +YC P +IDSMHKVTLEVKGETQ++NL
Subjt:  FSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNL

Query:  SEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        SEKLK   I HKLW+EQPENIPTC+ATKPY KS VS+FFKKLKL
Subjt:  SEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTGTAACTTCAGCATCTCGACTCACATTCTCCATTCCCGATTCCTCCAGGTTCTGTTCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGCTCTTC
GAATCGAAATTCCAATCCATTTAGCTCAGCTTCGATGACTGAATCCACTGAAAGTAATTCGGTTCTTCCATTGGACGACGGCGGAGCGAAGGCGGAGGAGACCGCCGATG
TTTTGGTTCAGTACGTGGTGCTCCGGAGAGATCTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAA
GACGACCCCCACACTTCAGAGTACTGTAGTCCCGGAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAAAAACT
TAAAGCAAATTCGATCATCCATAAACTGTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCTCAAATCTGTTGTATCAGCATTTTTTAAAA
AGCTGAAACTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATCTGTAACTTCAGCATCTCGACTCACATTCTCCATTCCCGATTCCTCCAGGTTCTGTTCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGCTCTTC
GAATCGAAATTCCAATCCATTTAGCTCAGCTTCGATGACTGAATCCACTGAAAGTAATTCGGTTCTTCCATTGGACGACGGCGGAGCGAAGGCGGAGGAGACCGCCGATG
TTTTGGTTCAGTACGTGGTGCTCCGGAGAGATCTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAA
GACGACCCCCACACTTCAGAGTACTGTAGTCCCGGAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAAAAACT
TAAAGCAAATTCGATCATCCATAAACTGTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCTCAAATCTGTTGTATCAGCATTTTTTAAAA
AGCTGAAACTCTAG
Protein sequenceShow/hide protein sequence
MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNK
DDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL