; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025591 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025591
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationscaffold13:30024866..30025711
RNA-Seq ExpressionSpg025591
SyntenySpg025591
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.5e-0454.35Show/hide
Query:  MVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPL
        MVDTH     AQ  P ED WE +SQWSE  Q   G+ WPK  E+PL
Subjt:  MVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPL
TrEMBL top hitse value%identityAlignment
A0A5A7TXA1 Glial fibrillary acidic protein-like1.2e-0454.35Show/hide
Query:  MVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPL
        MVDTH     AQ  P ED WE +SQWSE  Q   G+ WPK  E+PL
Subjt:  MVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPL
A0A5A7VHI3 Uncharacterized protein6.0e-0452.17Show/hide
Query:  MVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPL
        MVDTH     AQ  P ED W+ +SQWSE  Q   G  WPK  E+PL
Subjt:  MVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTCGCTCTGCGTCGCAGGCACTGTTATTGCTCTGTTTCACACACTATCACGAGGCCTCTGCCCGGGCGGTACCCAATTAGGATTAGAATCGAGGACGAAGTAGT
GATGACCTTCGAGAAGCTTATGCTTCCGTGCAGGCACACGAAGAATCCTCACTCAACTTGGATGGTAGACACCCATGTGCCTGGGGCATTCGCCCAATCTACCCCTGAGG
AAGATTTGTGGGAAGTCATCTCTCAATGGTCAGAACAATTACAGCAGATACCAGGAGCTGTGTGGCCAAAACCTGAAGAAATTCCACTTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTCGCTCTGCGTCGCAGGCACTGTTATTGCTCTGTTTCACACACTATCACGAGGCCTCTGCCCGGGCGGTACCCAATTAGGATTAGAATCGAGGACGAAGTAGT
GATGACCTTCGAGAAGCTTATGCTTCCGTGCAGGCACACGAAGAATCCTCACTCAACTTGGATGGTAGACACCCATGTGCCTGGGGCATTCGCCCAATCTACCCCTGAGG
AAGATTTGTGGGAAGTCATCTCTCAATGGTCAGAACAATTACAGCAGATACCAGGAGCTGTGTGGCCAAAACCTGAAGAAATTCCACTTCTCTAA
Protein sequenceShow/hide protein sequence
MSVALRRRHCYCSVSHTITRPLPGRYPIRIRIEDEVVMTFEKLMLPCRHTKNPHSTWMVDTHVPGAFAQSTPEEDLWEVISQWSEQLQQIPGAVWPKPEEIPLL