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Spg025600 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025600
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRas guanine nucleotide exchange factor K
Genome locationscaffold13:31728643..31733878
RNA-Seq ExpressionSpg025600
SyntenySpg025600
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR021924 - Protein of unknown function DUF3537


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585408.1 Proteasome subunit beta type-6, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1770.59Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQ IASVATRWHMLVTSAAAG N TK    P PP  DN G        DDTDSDSSS+VLIS+STQ+PSSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

KAG7020327.1 hypothetical protein SDJN02_17011, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1770.59Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQ IASVATRWHMLVTSAAAG N TK    P PP  DN G        DDTDSDSSS+VLIS+STQ+PSSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

XP_023002362.1 uncharacterized protein LOC111496225 [Cucurbita maxima]1.6e-1770.59Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQ IASVATRWHMLVTSAAAG N TK    P PP  DN G        DDTDSDSSS+VLIS+STQ+PSSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

XP_023537461.1 uncharacterized protein LOC111798502 [Cucurbita pepo subsp. pepo]1.6e-1770.59Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQ IASVATRWHMLVTSAAAG N TK    P PP  DN G        DDTDSDSSS+VLIS+STQ+PSSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

XP_038884363.1 uncharacterized protein LOC120075225 [Benincasa hispida]5.0e-1971.26Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVED--NSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQGIASVATRWHMLVTSAA GSN TKS  L PP V+D  ++    + D+D+DTDSDSSSDVLISV+TQ+PSSFQ RQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVED--NSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

TrEMBL top hitse value%identityAlignment
A0A0A0LS65 Uncharacterized protein4.3e-1665.52Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPV--EDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQGIASVATRWHMLVTSAA+GSN TK   L  P V  + N+      +++DDTDSDSSSDVLISV  ++ SSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPV--EDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

A0A1S3BDR7 uncharacterized protein LOC1034885595.1e-1767.42Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPP--PPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQALAQ
        G  +ITHRAQGIAS+ATRWHMLVTSAA+GSN TKS  L P     ++N+     EDE DDTDSDSSSDVLISV  Q+ SSFQTRQAL +
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPP--PPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQALAQ

A0A5A7VCT9 Uncharacterized protein6.6e-1768.97Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPP--PPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQGIAS+ATRWHMLVTSAA+GSN TKS  L P     ++N+     EDE DDTDSDSSSDVLISV  Q+ SSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPP--PPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

A0A6J1GHK9 uncharacterized protein LOC1114542477.8e-1870.59Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQ IASVATRWHMLVTSAAAG N TK    P PP  DN G        DDTDSDSSS+VLIS+STQ+PSSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

A0A6J1KJB4 uncharacterized protein LOC1114962257.8e-1870.59Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL
        G  +ITHRAQ IASVATRWHMLVTSAAAG N TK    P PP  DN G        DDTDSDSSS+VLIS+STQ+PSSFQTRQAL
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21080.1 unknown protein1.3e-0435.16Show/hide
Query:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQALAQQWRN
        G  +ITHRAQG+  +ATRWHM +T A        S  + P               + DTDS  +  + +S S    S FQ RQAL +  R+
Subjt:  GREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQALAQQWRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGGAAGATGATCGGAATGTTGCGGAGAGTGGAAGAGAGAAAATTACTCACAGAGCTCAAGGAATCGCGTCGGTTGCAACCAGATGGCACATGCTCGTCACTTC
CGCCGCCGCCGGATCCAACCAGACCAAATCCACGGTGCTGCCTCCGCCGCCCGTCGAAGACAATTCAGGCGGCGGCGGAGACGAAGACGAAGACGACGACACCGATTCCG
ACTCGTCGTCGGACGTTTTAATTTCAGTGAGCACGCAGAAACCTTCTTCCTTCCAAACCAGACAAGCTTTAGCACAACAATGGCGGAATTACACTGTTTGGATATGCATT
GGATCGGGGATTGCTTCATACGCTTTTCGCATTCGAATTCTCTCTCGTCATGTGGATTTTGAAACGGTCAAAATTGATGATGTGGCAGCTGACGTGGCGGGTGACGTGGC
ACACAGAACAGTCAAAATTGATGACGTGGCGGATGACGTGGTACTTCAACGGTCAAATTTTGCTGACGTGACACGTGACGTGGCGCATATGGACCAATGGAATGGTGACA
CGTGGCAAGCTGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGGAAGATGATCGGAATGTTGCGGAGAGTGGAAGAGAGAAAATTACTCACAGAGCTCAAGGAATCGCGTCGGTTGCAACCAGATGGCACATGCTCGTCACTTC
CGCCGCCGCCGGATCCAACCAGACCAAATCCACGGTGCTGCCTCCGCCGCCCGTCGAAGACAATTCAGGCGGCGGCGGAGACGAAGACGAAGACGACGACACCGATTCCG
ACTCGTCGTCGGACGTTTTAATTTCAGTGAGCACGCAGAAACCTTCTTCCTTCCAAACCAGACAAGCTTTAGCACAACAATGGCGGAATTACACTGTTTGGATATGCATT
GGATCGGGGATTGCTTCATACGCTTTTCGCATTCGAATTCTCTCTCGTCATGTGGATTTTGAAACGGTCAAAATTGATGATGTGGCAGCTGACGTGGCGGGTGACGTGGC
ACACAGAACAGTCAAAATTGATGACGTGGCGGATGACGTGGTACTTCAACGGTCAAATTTTGCTGACGTGACACGTGACGTGGCGCATATGGACCAATGGAATGGTGACA
CGTGGCAAGCTGATTGTTAA
Protein sequenceShow/hide protein sequence
MELEDDRNVAESGREKITHRAQGIASVATRWHMLVTSAAAGSNQTKSTVLPPPPVEDNSGGGGDEDEDDDTDSDSSSDVLISVSTQKPSSFQTRQALAQQWRNYTVWICI
GSGIASYAFRIRILSRHVDFETVKIDDVAADVAGDVAHRTVKIDDVADDVVLQRSNFADVTRDVAHMDQWNGDTWQADC