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Spg025611 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025611
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEndo/exonuclease/phosphatase domain-containing protein
Genome locationscaffold13:30820405..30826354
RNA-Seq ExpressionSpg025611
SyntenySpg025611
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1671580.1 hypothetical protein, partial [Gossypium barbadense]7.2e-0437.33Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV
        MK +CWN +G+ NP     L QL+R  NP ++FLSE+K+          G  A  +KE         SKHH+D +
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV

TXG48220.1 hypothetical protein EZV62_027514 [Acer yangbiense]4.2e-0439.62Show/hide
Query:  ICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHV
        + WNV+G+ NPRAF++L +L+++ +P+++FLSE+K+ G+KA   ++ +  + V
Subjt:  ICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHV

TYH19502.1 hypothetical protein ES288_A05G356800v1 [Gossypium darwinii]7.2e-0437.33Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV
        MK +CWN +G+ NP     L QL+R  NP ++FLSE+K+          G  A  +KE         SKHH+D +
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV

XP_018818418.2 uncharacterized protein LOC108989318 [Juglans regia]4.2e-0444.07Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHVDVV
        MK++ WN +G+ NPR  N LHQLV+E  P ++FLSE+K    K    + KL      VV
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHVDVV

TrEMBL top hitse value%identityAlignment
A0A2I4EG89 uncharacterized protein LOC1089893182.0e-0444.07Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHVDVV
        MK++ WN +G+ NPR  N LHQLV+E  P ++FLSE+K    K    + KL      VV
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHVDVV

A0A5C7GUF0 Uncharacterized protein2.0e-0439.62Show/hide
Query:  ICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHV
        + WNV+G+ NPRAF++L +L+++ +P+++FLSE+K+ G+KA   ++ +  + V
Subjt:  ICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHV

A0A5D2GNK1 Endo/exonuclease/phosphatase domain-containing protein3.5e-0437.33Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV
        MK +CWN +G+ NP     L QL+R  NP ++FLSE+K+          G  A  +KE         SKHH+D +
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV

A0A5J5NFM6 Endo/exonuclease/phosphatase domain-containing protein (Fragment)3.5e-0437.33Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV
        MK +CWN +G+ NP     L QL+R  NP ++FLSE+K+          G  A  +KE         SKHH+D +
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKI---------KGAKAYAYKE-------KLSKHHVDVV

A0A7J8LCH9 CCHC-type domain-containing protein7.8e-0444Show/hide
Query:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEK
        MKIICWNV+G+ +PR    L  L+++ NPQL+FL ++K+ G +    + K
Subjt:  MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAATATGCTGGAATGTTCAGGGAGTGAGGAATCCTCGGGCATTCAATAGTTTACACCAGTTGGTGCGGGAAGAGAATCCCCAACTCTTGTTCTTATCTGAGTC
AAAGATTAAGGGTGCAAAAGCGTATGCTTATAAGGAAAAGCTAAGCAAACATCATGTCGATGTCGTGTTCCTGGGGCCGTCCAACCCCTATCAAAACCCCAATCAACAAC
CGGGGGCGGCTCAAGAGGCTCTGCCAGAGGCGCCAGCACCAACGAAAGTTCCGCACCCTGATCCCCTGAGGCACTTCGAAGGGAAATTCACACGTCACGTCTTTCCCCTT
CAAATAAATTCACCGTTCTTGTCACGTGAAGGTCAGGAGGCATGGCCTCTCATTTGGGGGAGGGTAGAAGGAAAGGAAGAAGAGAAAGCTCTCAGAAGAAACCGAAGATT
GAAGCTCCTTCTGCAAAACCGAAGATCGAAGCTCAGATCCTCATCAAATCCAGCTGCAGAACTGAAGAACAAGACTCCGATCATCTTCAAATCTCGACGCAGAACTGAAG
AACGAAGTCCAGATCCTCTTCAAAACCCACTGCAGAATCGAAGATCGGAGCTCAGATCCTCGTCGGATTCAGCTACAGAACTGAAGAACAAGGCTCTGATCATCCTCAAA
TCCTGCCGCAGAACTGAAGAACGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAATATGCTGGAATGTTCAGGGAGTGAGGAATCCTCGGGCATTCAATAGTTTACACCAGTTGGTGCGGGAAGAGAATCCCCAACTCTTGTTCTTATCTGAGTC
AAAGATTAAGGGTGCAAAAGCGTATGCTTATAAGGAAAAGCTAAGCAAACATCATGTCGATGTCGTGTTCCTGGGGCCGTCCAACCCCTATCAAAACCCCAATCAACAAC
CGGGGGCGGCTCAAGAGGCTCTGCCAGAGGCGCCAGCACCAACGAAAGTTCCGCACCCTGATCCCCTGAGGCACTTCGAAGGGAAATTCACACGTCACGTCTTTCCCCTT
CAAATAAATTCACCGTTCTTGTCACGTGAAGGTCAGGAGGCATGGCCTCTCATTTGGGGGAGGGTAGAAGGAAAGGAAGAAGAGAAAGCTCTCAGAAGAAACCGAAGATT
GAAGCTCCTTCTGCAAAACCGAAGATCGAAGCTCAGATCCTCATCAAATCCAGCTGCAGAACTGAAGAACAAGACTCCGATCATCTTCAAATCTCGACGCAGAACTGAAG
AACGAAGTCCAGATCCTCTTCAAAACCCACTGCAGAATCGAAGATCGGAGCTCAGATCCTCGTCGGATTCAGCTACAGAACTGAAGAACAAGGCTCTGATCATCCTCAAA
TCCTGCCGCAGAACTGAAGAACGAAGCTAA
Protein sequenceShow/hide protein sequence
MKIICWNVQGVRNPRAFNSLHQLVREENPQLLFLSESKIKGAKAYAYKEKLSKHHVDVVFLGPSNPYQNPNQQPGAAQEALPEAPAPTKVPHPDPLRHFEGKFTRHVFPL
QINSPFLSREGQEAWPLIWGRVEGKEEEKALRRNRRLKLLLQNRRSKLRSSSNPAAELKNKTPIIFKSRRRTEERSPDPLQNPLQNRRSELRSSSDSATELKNKALIILK
SCRRTEERS