; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg025629 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025629
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold13:31822618..31823643
RNA-Seq ExpressionSpg025629
SyntenySpg025629
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0140097 - catalytic activity, acting on DNA (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW46822.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.4e-3733.92Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWNVRGLG+R+KR ++KD ++  NPD+V++QE++    DR  V S+W+ R+  WVAL A  ++GGILI+     +   + V+G+FSVS++    G 
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------
           WI+ VYGP     R  F  EL+D+  L    WC+ GDFN+IR + E++  S+ +  M+ F+ FI   EL+DP + N                     
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------

Query:  -----------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLL
                         G +FM + + +K ++K WN  +      KKK IL+ +   D +E+   +    L +R   K +L +L+L
Subjt:  -----------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLL

RVW91468.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]9.2e-3744.2Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWNVRGLG+R+KR +IKD ++  NPD+V++QE++    DR  V S+W+ R+  WVAL A  ++GGILI+    ++   + V+G+FSVS++    G 
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS
           WI+ VYGP     R  F  EL+D+  L    WC+ GDFN+IR + E++  S+ +  M+ F+ FIS  EL+DP + N S
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS

RVX05281.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.1e-3733.33Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWNVRGLG+R+KR ++KD ++  NPD+V++QE++  + DR  V S+W+ R+  WVAL A  ++ GILI+    ++   + V+ +FSVS++    G 
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------
           WI+ VYGP     R  F  EL+D+  L    WC+ GDFN+IR + E++  S+ +  M+ F+ FIS  EL+DP + N                     
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------

Query:  --------------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLLDE
                            G +FM +L+ +K ++K WN  +      KKK IL+ +   D +E+   +    + +R   K +L  L+L E
Subjt:  --------------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLLDE

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]4.9e-3842.54Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWN+RGLG+R KR L+K+ ++   PD+VIL E++  ++DR +V  +W  R   WV   +L  +GGI ++     V V+DS++G FSVSIR +    
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS
        ++ W++G+YGPC  +ER  F +EL DL   C   WCL GDFN++R++ E+      ++ M+ FN FI    L DP + N S
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS

XP_022145142.1 uncharacterized protein LOC111014657 [Momordica charantia]9.2e-3743.09Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        M I++WNVRGLG+ SKRA IKD I    PD+VIL E++ + I+   +KS+WS   IAW +LDA  ++GGI+++        V+ + G FS+S+      +
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGSRFMEKLK
           W+TGVY P   ++R  F QEL+DL  LC   W L  DFN+ RW+ E   A+     M KFNHFI    LIDP M NG      L+
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGSRFMEKLK

TrEMBL top hitse value%identityAlignment
A0A438EGN1 Transposon TX1 uncharacterized 149 kDa protein2.6e-3733.92Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWNVRGLG+R+KR ++KD ++  NPD+V++QE++    DR  V S+W+ R+  WVAL A  ++GGILI+     +   + V+G+FSVS++    G 
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------
           WI+ VYGP     R  F  EL+D+  L    WC+ GDFN+IR + E++  S+ +  M+ F+ FI   EL+DP + N                     
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------

Query:  -----------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLL
                         G +FM + + +K ++K WN  +      KKK IL+ +   D +E+   +    L +R   K +L +L+L
Subjt:  -----------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLL

A0A438J8L0 Transposon TX1 uncharacterized 149 kDa protein5.3e-3833.33Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWNVRGLG+R+KR ++KD ++  NPD+V++QE++  + DR  V S+W+ R+  WVAL A  ++ GILI+    ++   + V+ +FSVS++    G 
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------
           WI+ VYGP     R  F  EL+D+  L    WC+ GDFN+IR + E++  S+ +  M+ F+ FIS  EL+DP + N                     
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFN---------------------

Query:  --------------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLLDE
                            G +FM +L+ +K ++K WN  +      KKK IL+ +   D +E+   +    + +R   K +L  L+L E
Subjt:  --------------------GSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLDRLEEYNSIQRQQLEERKMLKADLLDLLLDE

A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)2.4e-3842.54Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWN+RGLG+R KR L+K+ ++   PD+VIL E++  ++DR +V  +W  R   WV   +L  +GGI ++     V V+DS++G FSVSIR +    
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS
        ++ W++G+YGPC  +ER  F +EL DL   C   WCL GDFN++R++ E+      ++ M+ FN FI    L DP + N S
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS

A0A803P8A0 Uncharacterized protein8.1e-3944.2Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKI++WN+RG G + KRA IK  I  +NPD+VILQE +   +DR  + SIW  R  AW+ L A+  +GG L++    ++ V+DS++G FS+S+    +G 
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS
           W +GVYGPC Y+ R  F  EL  L  +C  +WC+ GDFN+ R   E+L +S+S+R MK F+  I  ++LIDP + NGS
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)8.1e-3942.54Show/hide
Query:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH
        MKIISWN+RGLG+R KR L+K+ ++   PD+VIL E++  ++DR +V  +W  R   WV   +L  +GGI ++     V V+DS++G FSVSIR      
Subjt:  MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGH

Query:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS
        ++ W++G+YGPC  +ER  F +EL DL   C   WCL GDFN++R++ E+      ++ M+ FN FI    L DP++ N S
Subjt:  SEGWITGVYGPCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTATCTCCTGGAACGTTAGAGGGCTAGGTGCGAGGTCCAAAAGAGCCCTCATTAAAGACCTCATAAAAGATTCTAATCCTGATCTTGTGATTTTGCAGGAATC
CAGGCTCAATGTCATTGATAGAAGTGTAGTGAAATCTATTTGGAGTTTTAGGCACATAGCTTGGGTGGCCCTAGACGCTCTCAATTCCGCTGGAGGCATCCTCATCATGG
GGAAAGATTCTGTGGTTGACGTGGTAGATTCAGTGATGGGGGCTTTTTCAGTGTCGATTAGATGTATGTTCCAGGGTCATTCCGAAGGGTGGATCACAGGGGTTTATGGC
CCTTGTGGATATCAGGAGAGAACCCAGTTCTTGCAGGAGTTGTATGATTTGCAAAGGTTATGTCAGGGGGCTTGGTGTTTAGCAGGCGATTTTAATTTAATCAGGTGGGC
AGACGAAAGGCTGATTGCTAGTAATTCTTCTAGATGGATGAAAAAATTCAACCATTTCATTTCCTCAGTTGAGTTAATTGACCCGCTTATGTTTAACGGTTCTCGATTCA
TGGAAAAGTTGAAAGGGTTGAAAAACCAGATTAAGATATGGAATGCAGAAAACAAAGAAATAGCCTCCTGTAAGAAAAAGGAAATTCTGAGCCGGATTGACTTTTTAGAT
CGTTTAGAGGAGTATAATAGCATCCAAAGGCAACAGCTAGAGGAAAGAAAGATGCTTAAAGCTGACCTTCTTGATTTATTGTTGGATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGATTATCTCCTGGAACGTTAGAGGGCTAGGTGCGAGGTCCAAAAGAGCCCTCATTAAAGACCTCATAAAAGATTCTAATCCTGATCTTGTGATTTTGCAGGAATC
CAGGCTCAATGTCATTGATAGAAGTGTAGTGAAATCTATTTGGAGTTTTAGGCACATAGCTTGGGTGGCCCTAGACGCTCTCAATTCCGCTGGAGGCATCCTCATCATGG
GGAAAGATTCTGTGGTTGACGTGGTAGATTCAGTGATGGGGGCTTTTTCAGTGTCGATTAGATGTATGTTCCAGGGTCATTCCGAAGGGTGGATCACAGGGGTTTATGGC
CCTTGTGGATATCAGGAGAGAACCCAGTTCTTGCAGGAGTTGTATGATTTGCAAAGGTTATGTCAGGGGGCTTGGTGTTTAGCAGGCGATTTTAATTTAATCAGGTGGGC
AGACGAAAGGCTGATTGCTAGTAATTCTTCTAGATGGATGAAAAAATTCAACCATTTCATTTCCTCAGTTGAGTTAATTGACCCGCTTATGTTTAACGGTTCTCGATTCA
TGGAAAAGTTGAAAGGGTTGAAAAACCAGATTAAGATATGGAATGCAGAAAACAAAGAAATAGCCTCCTGTAAGAAAAAGGAAATTCTGAGCCGGATTGACTTTTTAGAT
CGTTTAGAGGAGTATAATAGCATCCAAAGGCAACAGCTAGAGGAAAGAAAGATGCTTAAAGCTGACCTTCTTGATTTATTGTTGGATGAGTAG
Protein sequenceShow/hide protein sequence
MKIISWNVRGLGARSKRALIKDLIKDSNPDLVILQESRLNVIDRSVVKSIWSFRHIAWVALDALNSAGGILIMGKDSVVDVVDSVMGAFSVSIRCMFQGHSEGWITGVYG
PCGYQERTQFLQELYDLQRLCQGAWCLAGDFNLIRWADERLIASNSSRWMKKFNHFISSVELIDPLMFNGSRFMEKLKGLKNQIKIWNAENKEIASCKKKEILSRIDFLD
RLEEYNSIQRQQLEERKMLKADLLDLLLDE