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Spg025631 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025631
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein Ycf2-like
Genome locationscaffold13:32428608..32430526
RNA-Seq ExpressionSpg025631
SyntenySpg025631
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035754.1 protein Ycf2-like [Cucumis melo var. makuwa]6.7e-0428Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY
        + M FF PF++ E D+ +E ED++ ++    +IA +  NRG  S  +   +   +E I      ME + E            MN R ++LV  +N +++ 
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY

Query:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPK-------RQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD
         K  +   AR F + LD +E ++EE D E    D  N T+   R DDED+D K        ++  G+ GG +  A       P+  D +    K    +D
Subjt:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPK-------RQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]5.1e-0427.5Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY
        + M FF PF++ E D+ +E ED++ ++    +IA ++ NRG  S  +   +   +E I      ME + E            MN R ++LV  +N +++ 
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY

Query:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDED-------DDPKRQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD
         K  +   AR F + LD +E ++EE D E    D  N T+   R DDED       D+ + ++  G+ GG +  A       P+  D +    K    +D
Subjt:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDED-------DDPKRQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]3.0e-0429.41Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQEMMNERLDKLVGSVNLMIDYMKNKQEARDFV
        + M FF PF + E D+ +E ED++ ++    +IA ++ NRG   M     IN  L  +  K+ + ++  E   E L + + SV L ++    +  AR F 
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQEMMNERLDKLVGSVNLMIDYMKNKQEARDFV

Query:  QELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPKR-------QAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD
        + LD +E ++EE D E    D  N T+   R DDED D KR       ++  G+ GG +  A       P+  D +    K    +D
Subjt:  QELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPKR-------QAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD

XP_038887714.1 cilia- and flagella-associated protein 251-like [Benincasa hispida]4.6e-0529.81Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNR--GATSMVDGKRINDALELITSKLN--------LMEKNQEMMNERLDKLVGSVNLMIDYM
        M+M +F PF++ E  + +E E++M+R  P   + +L+ NR  G +   D     + +  I   +N         M+ +Q ++ +++D LV S+  MIDYM
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNR--GATSMVDGKRINDALELITSKLN--------LMEKNQEMMNERLDKLVGSVNLMIDYM

Query:  KNKQ-------------EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDD
        K  Q                 F +ELD +E E+EEK+++  L DA +      RKDD++D+
Subjt:  KNKQ-------------EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDD

TrEMBL top hitse value%identityAlignment
A0A5A7SWP9 Protein Ycf2-like3.2e-0428Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY
        + M FF PF++ E D+ +E ED++ ++    +IA +  NRG  S  +   +   +E I      ME + E            MN R ++LV  +N +++ 
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY

Query:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPK-------RQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD
         K  +   AR F + LD +E ++EE D E    D  N T+   R DDED+D K        ++  G+ GG +  A       P+  D +    K    +D
Subjt:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPK-------RQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD

A0A5A7U047 Protein Ycf2-like2.5e-0427.5Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY
        + M FF PF++ E D+ +E ED++ ++    +IA ++ NRG  S  +   +   +E I      ME + E            MN R ++LV  +N +++ 
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQE-----------MMNERLDKLVGSVNLMIDY

Query:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDED-------DDPKRQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD
         K  +   AR F + LD +E ++EE D E    D  N T+   R DDED       D+ + ++  G+ GG +  A       P+  D +    K    +D
Subjt:  MKNKQ--EARDFVQELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDED-------DDPKRQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD

A0A5D3CEX9 Protein Ycf2-like1.4e-0429.41Show/hide
Query:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQEMMNERLDKLVGSVNLMIDYMKNKQEARDFV
        + M FF PF + E D+ +E ED++ ++    +IA ++ NRG   M     IN  L  +  K+ + ++  E   E L + + SV L ++    +  AR F 
Subjt:  MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQEMMNERLDKLVGSVNLMIDYMKNKQEARDFV

Query:  QELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPKR-------QAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD
        + LD +E ++EE D E    D  N T+   R DDED D KR       ++  G+ GG +  A       P+  D +    K    +D
Subjt:  QELDDLENEEEEKDDEVDLKDADNDTLFSFRKDDEDDDPKR-------QAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGATTTTTTCAAACCATTTGTTGACGGAGAAGCAGACTTGAGGCGTGAATTCGAAGACCAGATGGCAAGAGATCACCCAGTGCCAAATATAGCAGATTTAAC
ATTTAACAGGGGGGCGACATCAATGGTTGATGGGAAACGAATCAATGATGCTCTGGAGTTGATTACAAGCAAGTTGAATCTAATGGAGAAAAATCAAGAAATGATGAATG
AGCGACTAGACAAGCTGGTTGGGAGTGTCAACCTAATGATCGATTATATGAAGAATAAACAGGAAGCTCGCGATTTTGTCCAAGAACTAGACGACTTGGAAAATGAAGAA
GAGGAGAAGGACGATGAAGTGGATTTAAAAGATGCCGATAATGACACATTGTTCAGTTTTAGAAAAGACGATGAAGACGACGACCCAAAAAGGCAAGCACACCCAGGAAA
TGCAGGTGGGATGGCTGGGTTTGCAGATAAAAATGTGACGAACTTGCCTCAACAAAATGATGGCCAGCATGAAGGGCAAAAGGGGGAGGGACCCTCAGACATGCTTGTTA
CAGGCAAGACTGTGCCCAGGCTGGGAGTGCACAAGCCACCCACTGTAATCCAGATTCGATCTCATCCATCAGCTGAGTTGAAAAGAGGAGTAACTGTCCAAGACCTACGA
CACGACCCAAAGCCTCCGCATAAGGTGCTTGCAAAGATGCTTTTGTTGGACTTGGTTAATGTGAACCTTATTTTTGTGCTTTACCTAGGTAGTGAAATGAAAAATGGACC
TTGCGTTTTGTGCACAAGTCTTAATGACCCCCCTGTATTTACTGTGATATGGTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGATTTTTTCAAACCATTTGTTGACGGAGAAGCAGACTTGAGGCGTGAATTCGAAGACCAGATGGCAAGAGATCACCCAGTGCCAAATATAGCAGATTTAAC
ATTTAACAGGGGGGCGACATCAATGGTTGATGGGAAACGAATCAATGATGCTCTGGAGTTGATTACAAGCAAGTTGAATCTAATGGAGAAAAATCAAGAAATGATGAATG
AGCGACTAGACAAGCTGGTTGGGAGTGTCAACCTAATGATCGATTATATGAAGAATAAACAGGAAGCTCGCGATTTTGTCCAAGAACTAGACGACTTGGAAAATGAAGAA
GAGGAGAAGGACGATGAAGTGGATTTAAAAGATGCCGATAATGACACATTGTTCAGTTTTAGAAAAGACGATGAAGACGACGACCCAAAAAGGCAAGCACACCCAGGAAA
TGCAGGTGGGATGGCTGGGTTTGCAGATAAAAATGTGACGAACTTGCCTCAACAAAATGATGGCCAGCATGAAGGGCAAAAGGGGGAGGGACCCTCAGACATGCTTGTTA
CAGGCAAGACTGTGCCCAGGCTGGGAGTGCACAAGCCACCCACTGTAATCCAGATTCGATCTCATCCATCAGCTGAGTTGAAAAGAGGAGTAACTGTCCAAGACCTACGA
CACGACCCAAAGCCTCCGCATAAGGTGCTTGCAAAGATGCTTTTGTTGGACTTGGTTAATGTGAACCTTATTTTTGTGCTTTACCTAGGTAGTGAAATGAAAAATGGACC
TTGCGTTTTGTGCACAAGTCTTAATGACCCCCCTGTATTTACTGTGATATGGTGCTGCTGA
Protein sequenceShow/hide protein sequence
MSMDFFKPFVDGEADLRREFEDQMARDHPVPNIADLTFNRGATSMVDGKRINDALELITSKLNLMEKNQEMMNERLDKLVGSVNLMIDYMKNKQEARDFVQELDDLENEE
EEKDDEVDLKDADNDTLFSFRKDDEDDDPKRQAHPGNAGGMAGFADKNVTNLPQQNDGQHEGQKGEGPSDMLVTGKTVPRLGVHKPPTVIQIRSHPSAELKRGVTVQDLR
HDPKPPHKVLAKMLLLDLVNVNLIFVLYLGSEMKNGPCVLCTSLNDPPVFTVIWCC