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Spg025641 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025641
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold13:27778125..27780475
RNA-Seq ExpressionSpg025641
SyntenySpg025641
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8694437.1 hypothetical protein F3Y22_tig00110783pilonHSYRG00231 [Hibiscus syriacus]5.9e-1030.22Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYPEERQSLH-----ISGYSSIRAECSFSIQH---------T
        +PT+H++T+S  R++LL+ II G  I+VG II +    C +++A  L F +LIT LCQ+     +        I+G +  +       +          T
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYPEERQSLH-----ISGYSSIRAECSFSIQH---------T

Query:  PFTGPSPSSEALAIAYRQ--------LDQITENLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLP-QEDKDSDEE
            PSP S A + A +Q        + Q+ E L  Y+AYAK RD  +    +   P      P FP  L+P  ED ++  E
Subjt:  PFTGPSPSSEALAIAYRQ--------LDQITENLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLP-QEDKDSDEE

KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]5.3e-1135.61Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ---------RYPEERQSLHISGYSSIRAECSFSIQHTPFTGP
        +PT+HDST+S +R+ +LY I+KG +INVG +I  EI  C  +  GKLFF  LIT+ C+           P  R+ + +S       + +     T  T  
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ---------RYPEERQSLHISGYSSIRAECSFSIQHTPFTGP

Query:  SPSSEALAIAYRQLDQITENLRTYWAYAKERD
         P  E L+       Q+ E L+T+W Y +ERD
Subjt:  SPSSEALAIAYRQLDQITENLRTYWAYAKERD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-1130.77Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSE
        +PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+     +    + LH +G     A    + +    +   PSS 
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSE

Query:  ALAIA---------YRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE
          A A          +QL  + + L                     + +WAY+KERD A+++   +      P FP FPQ +L    KD D E + E+D+
Subjt:  ALAIA---------YRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE

Query:  NNEEDNEE
        +   +  E
Subjt:  NNEEDNEE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]6.0e-1533.5Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISG------YSSIRAECSFSIQHTPFTG
        +PTTH  T+S DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+     +    + LHI+G       + I  E    +   P T 
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISG------YSSIRAECSFSIQHTPFTG

Query:  ---PSPSSEALAIAYRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE
            + SS A     +QL  + + L                     + +WAY+KERD A+++   +      P FP FPQ LL  +D D + E + + D 
Subjt:  ---PSPSSEALAIAYRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE

Query:  NNE
        +NE
Subjt:  NNE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.7e-1433.16Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYP--EERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSEAL
        +PTTH   +S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+  P     + LH +G     A    + +    +   PSS   
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYP--EERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSEAL

Query:  AIA---------YRQLDQITENL----------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDENNE
        A A          +QL  + + L          + +WAY+KERD A+++   +      P FP FPQ +L  +D D + E + + D +NE
Subjt:  AIA---------YRQLDQITENL----------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDENNE

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.2e-1230.77Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSE
        +PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+     +    + LH +G     A    + +    +   PSS 
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSE

Query:  ALAIA---------YRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE
          A A          +QL  + + L                     + +WAY+KERD A+++   +      P FP FPQ +L    KD D E + E+D+
Subjt:  ALAIA---------YRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE

Query:  NNEEDNEE
        +   +  E
Subjt:  NNEEDNEE

A0A2P5CEY2 Uncharacterized protein2.9e-1533.5Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISG------YSSIRAECSFSIQHTPFTG
        +PTTH  T+S DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+     +    + LHI+G       + I  E    +   P T 
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQR----YPEERQSLHISG------YSSIRAECSFSIQHTPFTG

Query:  ---PSPSSEALAIAYRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE
            + SS A     +QL  + + L                     + +WAY+KERD A+++   +      P FP FPQ LL  +D D + E + + D 
Subjt:  ---PSPSSEALAIAYRQLDQITENL---------------------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDE

Query:  NNE
        +NE
Subjt:  NNE

A0A2P5DXM3 Uncharacterized protein3.2e-1433.16Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYP--EERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSEAL
        +PTTH   +S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+  P     + LH +G     A    + +    +   PSS   
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYP--EERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSEAL

Query:  AIA---------YRQLDQITENL----------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDENNE
        A A          +QL  + + L          + +WAY+KERD A+++   +      P FP FPQ +L  +D D + E + + D +NE
Subjt:  AIA---------YRQLDQITENL----------RTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDENNE

A0A6A2ZSK6 Integrase catalytic domain-containing protein2.8e-1030.22Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYPEERQSLH-----ISGYSSIRAECSFSIQH---------T
        +PT+H++T+S  R++LL+ II G  I+VG II +    C +++A  L F +LIT LCQ+     +        I+G +  +       +          T
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYPEERQSLH-----ISGYSSIRAECSFSIQH---------T

Query:  PFTGPSPSSEALAIAYRQ--------LDQITENLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLP-QEDKDSDEE
            PSP S A + A +Q        + Q+ E L  Y+AYAK RD  +    +   P      P FP  L+P  ED ++  E
Subjt:  PFTGPSPSSEALAIAYRQ--------LDQITENLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLP-QEDKDSDEE

A0A7J6FZ22 Uncharacterized protein2.6e-1135.61Show/hide
Query:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ---------RYPEERQSLHISGYSSIRAECSFSIQHTPFTGP
        +PT+HDST+S +R+ +LY I+KG +INVG +I  EI  C  +  GKLFF  LIT+ C+           P  R+ + +S       + +     T  T  
Subjt:  MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQ---------RYPEERQSLHISGYSSIRAECSFSIQHTPFTGP

Query:  SPSSEALAIAYRQLDQITENLRTYWAYAKERD
         P  E L+       Q+ E L+T+W Y +ERD
Subjt:  SPSSEALAIAYRQLDQITENLRTYWAYAKERD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCACGATAGCACGATCTCAGTGGATAGAGTTATGTTACTCTATTACATTATCAAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTT
AGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGTCAGAGGTATCCAGAGGAAAGACAAAGCCTCCACATCTCAGGCTACTCCT
CAATCAGGGCCGAATGTAGCTTCTCCATCCAGCACACTCCTTTTACAGGGCCCTCGCCATCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCACGGAG
AACCTGAGGACGTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCAGATTTTCCTCAATC
ACTGCTACCTCAAGAGGACAAGGATTCTGATGAAGAGAATGATGAAGAAAATGATGAAAATAATGAAGAAGATAATGAAGAGAGAGAGTTCCTCGGACGAGTATTAGGGG
AGTTTTCTGACCCCTTTACTTTTGCTGTTTTGATTGCTTTAATTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCACGATAGCACGATCTCAGTGGATAGAGTTATGTTACTCTATTACATTATCAAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTT
AGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAACTCTGTCAGAGGTATCCAGAGGAAAGACAAAGCCTCCACATCTCAGGCTACTCCT
CAATCAGGGCCGAATGTAGCTTCTCCATCCAGCACACTCCTTTTACAGGGCCCTCGCCATCATCGGAAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCACGGAG
AACCTGAGGACGTATTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTCTATCTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCAGATTTTCCTCAATC
ACTGCTACCTCAAGAGGACAAGGATTCTGATGAAGAGAATGATGAAGAAAATGATGAAAATAATGAAGAAGATAATGAAGAGAGAGAGTTCCTCGGACGAGTATTAGGGG
AGTTTTCTGACCCCTTTACTTTTGCTGTTTTGATTGCTTTAATTGTTTAG
Protein sequenceShow/hide protein sequence
MPTTHDSTISVDRVMLLYYIIKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRYPEERQSLHISGYSSIRAECSFSIQHTPFTGPSPSSEALAIAYRQLDQITE
NLRTYWAYAKERDEAIREFYLSIAPSIAPVFPDFPQSLLPQEDKDSDEENDEENDENNEEDNEEREFLGRVLGEFSDPFTFAVLIALIV