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Spg025646 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg025646
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold13:28323304..28327393
RNA-Seq ExpressionSpg025646
SyntenySpg025646
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]1.0e-0836.36Show/hide
Query:  VRFVNRLARAKYAE-LLKRDFLFERGFSGD------LPHFLRAGITNHDWELFCSKHESVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNL
        V+  +  A  +Y E +  R    E+GF GD       P F+   IT H+W+LFC+  E + A +V EFYAN+   +   V VRG++V  S  AIN +Y L
Subjt:  VRFVNRLARAKYAE-LLKRDFLFERGFSGD------LPHFLRAGITNHDWELFCSKHESVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNL

Query:  QDFPHAGYNEMVVAPSNESLS
         D P   ++E V A +   L+
Subjt:  QDFPHAGYNEMVVAPSNESLS
PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]2.1e-0939.22Show/hide
Query:  VRFVNRLARAKYAELLKRDFL-FERGFSGD------LPHFLRAGITNHDWELFCSKHESVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNL
        V+F +  A A+Y E +K   L  E+GF+ +       P F+   I  H+W+LFC+ HE     +V EFYAN+ + E   V V+G++V WS  AIN L+ L
Subjt:  VRFVNRLARAKYAELLKRDFL-FERGFSGD------LPHFLRAGITNHDWELFCSKHESVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNL

Query:  QD
         D
Subjt:  QD
TrEMBL top hitse value%identityAlignment
A0A4Q3ENY7 Uncharacterized protein7.2e-0835.54Show/hide
Query:  FVNRLARAKYAELLKRDFLFERGFSGDLPHFLRAGITN----HDWELFCSKHE-SVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNLQD--
        F ++ A  +Y  L++R  +FERG        + + I N      W  FC+  E   N  +++EFYAN+ + E   V VRG++VD S GAINAL    D  
Subjt:  FVNRLARAKYAELLKRDFLFERGFSGDLPHFLRAGITN----HDWELFCSKHE-SVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNLQD--

Query:  FPHAGYNEMVVAPS-NESLSI
        F + GY + +  P+ +E LS+
Subjt:  FPHAGYNEMVVAPS-NESLSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGCGTCGCGACGCTGTCCTTACAGCGTCTCGACGCTAGGCGTTTTCCAGACTTTCTAGCTGCGGATTGGGCTTCTTTGCTTGGGCCAACTTCAATTCTTTTTAA
GATAGTCGAGGAGGTTGCTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAACCTGAAGGACAAAACCCAGAGCAGACTGAGCCGATAGTTGCGGATACAGAGGAAGTTC
GAGAAGAAAATACGGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCCCCTGAAAAAGGTAAT
GAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAAGTGCCAAAACGTCGCCGCGCGAAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGAACTGATACTCCCTC
GCCGCCAACCACTGACTCTGAGAGAGAAAGTGCAGAAAGAGAGGAACAGGAGAAAAAAGAGGTCGAGGATAAAGCAAGAGAGGAAGTAAAGAAAAAGGCTGAAGAAGAAA
GGTTGCTCAAGCAAAGGGCAGAGAAGGGCAAGAGTGTTGCTGCAGCATCGGAGGAACCTGACAAGATAGAAGAGCCACAGTTGCCGTATGTCCGCTTCGTCAATCGTCTT
GCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTCGAGAGAGGATTTAGTGGTGATCTTCCACATTTTCTGAGGGCCGGCATTACGAACCACGACTGGGA
ATTATTCTGTTCCAAGCATGAATCTGTGAACGCGCAGATAGTGCACGAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTTATTGTTCGAGGTATAGAAGTCG
ACTGGAGTCCTGGTGCCATTAACGCCCTGTATAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGTTGTGGCGCCATCTAATGAGTCTCTGAGTATTGATGTA
GGGAAGATCATTGCGAGTGAGATATCTGGAAGCTGTGACCAGGCCAGTAGGCAAGAGTTTGTTGAAAGGCAAGCTCAAACCTATTGGACTTCTGCTAAAAGGAGAGATGA
CACACTTCGGAGGGCCTTGCAGTCCAATTTCTCAAAACCATATCAGGCCTTCCCTATGTTTCCCGATGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCGAAAGAG
AAGAAGAGGATGATGAAAATGAGCAGGGTCAGGAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGCGTCGCGACGCTGTCCTTACAGCGTCTCGACGCTAGGCGTTTTCCAGACTTTCTAGCTGCGGATTGGGCTTCTTTGCTTGGGCCAACTTCAATTCTTTTTAA
GATAGTCGAGGAGGTTGCTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAACCTGAAGGACAAAACCCAGAGCAGACTGAGCCGATAGTTGCGGATACAGAGGAAGTTC
GAGAAGAAAATACGGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCCCCTGAAAAAGGTAAT
GAGCCAGTACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAAGTGCCAAAACGTCGCCGCGCGAAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGAACTGATACTCCCTC
GCCGCCAACCACTGACTCTGAGAGAGAAAGTGCAGAAAGAGAGGAACAGGAGAAAAAAGAGGTCGAGGATAAAGCAAGAGAGGAAGTAAAGAAAAAGGCTGAAGAAGAAA
GGTTGCTCAAGCAAAGGGCAGAGAAGGGCAAGAGTGTTGCTGCAGCATCGGAGGAACCTGACAAGATAGAAGAGCCACAGTTGCCGTATGTCCGCTTCGTCAATCGTCTT
GCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTCGAGAGAGGATTTAGTGGTGATCTTCCACATTTTCTGAGGGCCGGCATTACGAACCACGACTGGGA
ATTATTCTGTTCCAAGCATGAATCTGTGAACGCGCAGATAGTGCACGAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTTATTGTTCGAGGTATAGAAGTCG
ACTGGAGTCCTGGTGCCATTAACGCCCTGTATAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGTTGTGGCGCCATCTAATGAGTCTCTGAGTATTGATGTA
GGGAAGATCATTGCGAGTGAGATATCTGGAAGCTGTGACCAGGCCAGTAGGCAAGAGTTTGTTGAAAGGCAAGCTCAAACCTATTGGACTTCTGCTAAAAGGAGAGATGA
CACACTTCGGAGGGCCTTGCAGTCCAATTTCTCAAAACCATATCAGGCCTTCCCTATGTTTCCCGATGATTTATTTAACCTTTGGATACCGCCCCCACCTGTCGAAAGAG
AAGAAGAGGATGATGAAAATGAGCAGGGTCAGGAGGACTGA
Protein sequenceShow/hide protein sequence
MDSVATLSLQRLDARRFPDFLAADWASLLGPTSILFKIVEEVAAEAVEEGNPKEPEGQNPEQTEPIVADTEEVREENTEEVREENTEEVQEKQTEDVQEEQAEVAPEKGN
EPVQEARVEVIMPEVPKRRRAKRKAGRVKVVRTDTPSPPTTDSERESAEREEQEKKEVEDKAREEVKKKAEEERLLKQRAEKGKSVAAASEEPDKIEEPQLPYVRFVNRL
ARAKYAELLKRDFLFERGFSGDLPHFLRAGITNHDWELFCSKHESVNAQIVHEFYANIDEEEGFQVIVRGIEVDWSPGAINALYNLQDFPHAGYNEMVVAPSNESLSIDV
GKIIASEISGSCDQASRQEFVERQAQTYWTSAKRRDDTLRRALQSNFSKPYQAFPMFPDDLFNLWIPPPPVEREEEDDENEQGQED